Oncorhynchus nerka (sockeye salmon): 115144276
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Entry
115144276 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: SH3 and multiple ankyrin repeat domains protein 1-like
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_4
SH3_2
SAM_2
Ank_5
Ank_3
SH3_1
PDZ_6
PDZ
SH3_9
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
115144276
NCBI-ProteinID:
XP_029541039
LinkDB
All DBs
Position
LG16:403326..458757
Genome browser
AA seq
2355 aa
AA seq
DB search
MSPGPLCSDPAQQRMLGNNKHYYPGEGDKDGEDEEEEEEQGQDNNKGDGREKENGGMEGL
EEIEMKGGRQSREGKGEGGKPSAIVVGRQRGDRTLRPDNPGNRGIPYTSNQAPHKQQHQQ
QYHPAPSTQTQKRRAHMERSMTTVAPIEDTRLTMMVFRIGIPDIKQTRCLQFDPDFTVWS
AKQEVICSLSEPLWDVYNYGLFQPAGDGCDAMFLEEECCLRNYPQSFEKGVPYLEFRYKT
RVYKQTNLDEKLLTKLHTKVSLKKFMDYIASGSIDKMSKALEKGLDPNYHDPDNGESPLS
VAVQSGMTVEGIRVLVQGGAHVDFRTRDGLTAVHKAVRAHNHVALLALLSLGASPNYKDR
CSLTPLYHSVLTGGDTSCCETLLYYRARLGVRDENGWEESHQLRDEEEFGMQEIHKACQN
GFAQHLEHLLFYGADTTSQNASGNTALHICALYDKESCVRVLLYRGASKEIKNKHGQTPF
QVAVMSGHFELGEILKNHRDADVVPFLESPKYAPKRGESARTLPLLMAHPYPLLRANSDN
SMTLPDPMALSNKAAGANPIPGKGRRASEGVRSSSSPRARTRSPSRGGGQSDTEERHQSK
PQRGRQGATSAGSGGWSAGGQMRHMYSAVPGRVYMATRAYTAHEDKELSISKGDKVKVLS
VGEGGFWEGTVKGRTGWFPSDCVEEVGPPSKDNRSETRSEKAKRKLFRNVTMGAYDGVDG
PSDYIIKEKTVLLQKKDNEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWR
AGLRMGDFLIEVNGHNVVKVGHRQVVNMIRQGGNTLMVKVVMVARNPEMEDTNPRKKAVP
QQAKRLTPPAIALRSKSMTLELEDMVEKAASPWKKKAEYESSQVPDKKRTVYQMALNKLD
EILAAAQHTIASDGQGQRGHGGKRERTKSIAPNEPSHDQLVGVMPPGFNQGQYPPGHPHG
VMLRQKSIGVTEEERQSLHTPAMKLARSLSEDIPPPPSTSAPEPPLSAGPHTARREEQSA
PQPLSSQAQAHYQALSTQQQAAHDAQAGWDSQQHGMTTTLQRGGGQHTGDPTEGTRRGGG
KMGALRRGYSSATPPTSAAPTTQQQPQQQQQSQQHQVAARERIGGASRGGGVRKGGRGPL
VKQPTVEGGLGRHHRGGQGQGGKSSGAKEKSSIPIPTIIVKAPSTSSGSGRSSQGSSMDA
EQPPPDIDDPTSPPASPDTSTTRGPPSTVVPSSPQPHVSSPMTPSTVAPQLPPNLENLDF
TTQFGGAFVGAARRDRERFRDMRRKSASFFLSSEEDVQGEAGGGGGVWTQPLQGIGIDVP
TPRLRPSKSIDEGMFSRDNYIHYASSMPPAFGLPEYHSPVMGQDGQPKSAPSNYGPGTPA
TTFIHPLTGKVLDPSSPLGLALAARERALKDDRRTRREERHFGRQMSSVGVFPTSLPSPT
PSLFSTSTTTTSHASLNRPQSPRILRLGGGGERVERDQAAGAREGLRVRFSEDRTNQYQT
QYYQQSPRDREPPGLPMQPPGPPPQPAPRRPSFLQMESSANASYIPQYTLTAAPAHPHEG
GGEGGVGGGLGLMVLPPPAPSIDLDDEFVFVDPLPPPLQFANGQGQREMQRGYPQQHQHS
AQHVSPAMPPTPPPLPSPKVPPPGGFPSNAPLPSPQAGDSAASSLTSYDSEVANLTQSGL
SPSLPSPQIFPPSSTTTATSILPAPAPSLHRPQPMSHTHPFFSDPTVPVNPVNMGAPAPQ
MTSAQYRGPATLTTTMTYATTTTMTATATATTASVVSSDYNASLKAPRTAINTAGKAGDH
HPSMMKTGDWQTETVVDSGIEELDSHNSGDQHLDILGVSELTGERGGGGGVEGDGWGGEH
PDPYMTYSGGQEFEAHPTKHTTKPTVYPKTMQYKEGGIKDTREALRRQVSTNPPYQNTPP
HPQRQANPEEEARRGEGGAADERKQRRQSRPKMEDGFGSTLAACLERPNTLEPRGSTEGV
DPGQGLERGEAQRDGMSIEGRRLHSPLSGMKASIINELSSKLQQMSNKSTDDWGQSEMRG
QSPISLRSPTMHRYSGDFSASFQSPPTARSTSPLPTSSPQHRPPILTPNLTATPSGSPSH
QPTLQPNWTRSPSPQIPTSPSHFSHPPLSPTYSPYPTSPKHRTKYRGAKIFDFQCTPGPE
LRSSVSRRRAPSPLIYSTDRPSPAPPRPSSLPILPSTHVYNTPFDFPSPLTPSSPSHTLG
DSYNPSTPPLFPTSPQPPSALLVSRSLSPTQFLSGASSPSMHMPPSPSCLSYPHHTPLPP
AKPFTIKPLSYWTRWDVADWLAYLNLGEHRERFLDNEIDGSHLPSLTKDDFLDLGVTRVG
HRMNIERALKTLTDR
NT seq
7068 nt
NT seq
+upstream
nt +downstream
nt
atgtcacccggccctctctgcagtgaccctgcacagcaaaggatgctgggaaataacaaa
cactattatcccggggagggcgacaaggatggggaggatgaggaagaggaagaggagcag
ggacaagataacaacaagggggatggtagagagaaggagaatggagggatggaagggctc
gaggagattgagatgaagggaggcagacaatcacgcgaagggaaaggggagggaggtaaa
ccctcagccattgtggttggaaggcagagaggggaccggacactgaggccagacaatcca
ggaaatagaggcatcccttatacgtccaatcaggcccctcataagcagcagcaccagcag
cagtatcacccggccccatccactcagacccagaaaagacgtgctcacatggagcgcagt
atgaccacagtggcgcccatagaggacactcgactgaccatgatggtgttccgcattgga
atccctgacatcaaacagacaaggtgtctgcagtttgaccctgacttcacagtttggagc
gccaagcaggaggtcatctgttcgctgagcgagccactgtgggacgtctataactatggc
ctctttcagcccgccggagacggatgcgatgccatgttcctggaggaggagtgctgcctc
cgaaactacccacagtcctttgagaaaggggtgccttacctggagtttaggtacaagacc
agggtatacaaacagacaaacctggatgaaaaactacttacaaaattgcacaccaaggtg
agtctgaaaaagttcatggactacattgcaagtggatcaatagataagatgtcaaaagcc
ctggaaaaaggtctcgacccaaactaccatgaccctgacaacggagaatccccactgtct
gtggcggtgcagtctggcatgacagtggaggggatcagggtgctcgttcagggtggggcc
catgtggactttagaaccagagatggactgacagctgtacacaaggctgtcagggcacac
aatcacgttgcactgctggctcttctgtccctgggagcatctcctaactacaaggaccga
tgtagcctgaccccactgtaccactcagtgctgacaggtggcgacacctcctgctgcgag
accctactctactacagggccagactgggagtgagggatgagaatggctgggaggagtct
caccagctcagggacgaagaggaatttggaatgcaagagatacacaaggcctgccagaat
ggttttgcccagcacttggagcaccttctgttctatggggcagataccacttctcagaat
gcctcagggaacaccgcacttcatatttgtgctctgtatgataaggaaagctgtgttcgt
gttctgctctacagaggggccagtaaggaaattaagaacaagcatggacaaacccccttt
caggtagcagtaatgtcgggccattttgaacttggggaaatcctcaaaaaccacagagat
gcagatgtagtgccctttctggaatccccaaagtatgctcccaaaagaggagagagtgca
cgcacgctccctctcctcatggctcacccctaccccctcctgcgtgctaacagtgataac
agtatgaccctgcctgaccccatggccctatccaacaaggctgctggagccaatcccatc
cctggaaagggtcgcagggcctctgagggtgtgaggagctccagcagtcccagggcccgt
acccgctccccgtcgcgaggaggagggcagagtgacactgaggagaggcatcaaagcaaa
ccacagcgcggcagacagggtgcgacctcagcgggtagtggcgggtggtcagctgggggt
cagatgaggcatatgtacagtgcggtcccagggcgagtgtacatggccacgagggcctac
actgcccacgaagacaaagagctcagcatcagcaaaggagacaaagtcaaagtgttgagt
gttggagagggggggttctgggagggcacagtgaaaggtcgtacaggctggttcccctca
gattgtgtggaggaggtcggtcctcccagtaaggacaatcgatcagagacgcgcagtgag
aaagccaagaggaagctgtttcgtaatgtcaccatgggagcatatgatggcgtggatggc
cccagtgactacatcattaaggagaagacagtgctcctgcagaagaaagacaatgagggc
tttggctttgtgcttcggggagccaaagcccagactcctatagaggagttcacgccgacc
ccagcattccccgcgctgcagtacctggagtctgtggatgagggcggtgtggcctggagg
gctggcctaaggatgggggacttccttattgaggtcaatggtcacaatgtcgtgaaggtg
ggccacaggcaggtggtcaacatgatcagacaaggtggcaacactctgatggtcaaggtt
gtcatggtggcccgcaacccggagatggaggacaccaaccccaggaagaaagcagtcccc
cagcaggctaagaggctgactcctcctgccattgccctgcgctccaaatcaatgacatta
gagctggaagacatggtggagaaagctgcctctccatggaaaaagaaagcagagtacgag
tcctcccaggtgcctgataagaagaggacagtctatcaaatggcactaaataaactggat
gagatcctggcagcagctcagcacacgattgcgtcagacggacaggggcagcggggtcac
ggggggaagagagaacgaaccaagagcatcgcccccaatgagccaagtcatgaccagttg
gttggtgtaatgccgcctggcttcaaccagggtcagtatccccccggccatccgcatgga
gtaatgttgcgacagaaatctattggtgtgacggaggaggagaggcagtcccttcacacc
ccggctatgaaactggcccgtagcctgtcggaggacatcccccctccccccagcacatcc
gccccagaaccccccttgtctgctggaccccacactgctcggagggaggagcagtctgcc
ccccagccactgtcctcccaggcccaggcccactaccaggccctctccacccaacaacaa
gcagcgcatgatgcccaggcaggttgggacagtcaacagcacggcatgaccaccaccctc
cagagaggaggaggacaacacacaggggatcccacggaggggacgaggagaggaggagga
aaaatgggggcattgaggaggggctacagtagtgctactccacctacaagtgcagctccc
acaactcaacagcaaccccagcagcaacagcagtcccagcaacatcaagtggcggcccgg
gagaggatcggcggggcaagcaggggcgggggagtcaggaagggcgggaggggccctcta
gtgaagcagcccacagtggaaggtgggctcggcaggcaccacagaggggggcaaggccag
gggggtaaaagctccggggccaaagagaagagctccatccccatccccaccatcatcgtc
aaagctccatccaccagcagtggcagtggccgcagcagccagggcagcagcatggatgcc
gagcaaccgcctcccgacatagatgaccctacctccccccctgcctctcccgacacctcc
accacccgcggcccgccttccaccgtggtcccctcatcaccccagccccatgtctcctcc
cccatgaccccttcgactgtcgccccccagctgccccctaacctggagaacctggacttc
accacccagttcgggggggccttcgtcggggcagcgcgccgggaccgggaacgtttccgt
gacatgaggaggaagagtgcttccttcttcctctcctctgaagaggatgtccaaggggag
gcggggggaggtggaggggtatggacccagcccctacaggggatagggatcgatgtcccc
accccccgcctccggccttccaagtcgattgacgagggcatgttctctagggacaattac
atccactacgccagcagtatgccccctgcctttgggctacctgagtaccactcccctgtg
atgggccaggatggccagcccaagtccgctccctccaactacggcccaggcactccagcc
accaccttcatccaccctctgactgggaaagtcctggacccctcgtcccccctgggcctg
gcgctggctgcacgagagagggccctcaaggacgaccggaggacccgacgggaggagcgg
cactttggccggcagatgtccagcgtgggggtgttccctacatctctcccgtctcccacg
ccatccctgttttccacatccactaccaccacctcacacgcctcactgaaccgcccacag
tcacccaggatattacgtttgggagggggaggagagagagtggagagggaccaggcggct
ggagccagagagggcctcagagttcggttttcagaggacagaaccaatcagtaccagacc
caatattaccaacagagtccaagagacagggagccacctggcctacccatgcagccaccc
ggcccgccgcctcagcctgcaccccgcagaccctcgttcctgcagatggagagcagtgca
aacgctagctacatcccccagtacaccctcaccgcagccccagcacacccacatgaaggt
gggggagagggaggagttggagggggactggggctcatggttcttcccccgcctgcaccc
tcgatagatttggacgatgagtttgtctttgttgaccccctgccccctcccttgcagttc
gccaacggccaaggccagcgagaaatgcagagggggtaccctcaacagcatcaacactca
gctcaacacgtctctcccgccatgccacccacaccgccccccctcccctctcctaaagta
cctccaccaggaggcttcccctccaacgcccccctcccctccccccaggcaggggactct
gccgcctccagcctcacatcctacgacagcgaggtggccaacctcacccagtcaggtcta
tctccctcccttccctcaccccagatattccccccttcctccaccactacagccacctcc
attttacccgcacctgcaccctcactccacagaccccagcccatgtcgcatacacacccc
ttcttcagtgaccccaccgtaccagttaaccccgttaatatgggtgcccctgctccccaa
atgacctcagcacagtaccgcggcccggccaccctcactacaactatgacctacgccaca
acaacgaccatgaccgccaccgccactgctaccacagcctctgtggtgtcgtcagactac
aacgcgtctctgaaagcccccagaaccgccatcaacactgcaggcaaggcaggagaccac
cacccctccatgatgaagactggagactggcagacagagacggtggtggactctgggatc
gaggaactggacagccacaacagcggcgaccagcacctggacatactgggagtgagtgaa
ctgacaggtgagagaggaggaggaggaggagtagaaggggacggatggggtggcgagcac
ccagatccttatatgacctactcaggtgggcaagagtttgaagcacaccccaccaaacac
acgaccaaaccaaccgtgtatccaaagacgatgcagtacaaagagggcggtatcaaggac
acaagggaagcattgcgtcgacaggtgagcaccaacccgccctaccagaacaccccacca
cacccccagagacaggctaacccagaggaggaggccaggagaggagagggaggagcagcg
gacgagaggaaacaacgtagacagagtcgacccaagatggaggacggcttcggttccacc
ctggctgcctgtctggagcggcccaacaccttggagccaaggggatcaaccgagggggtc
gacccgggacagggcctggagcgaggtgaggcccagagggacgggatgtctattgagggg
cgcaggctgcactcgccactctcggggatgaaggccagcatcatcaacgagctgagctcc
aagcttcagcagatgagcaataagagcacagacgactggggtcagtctgagatgcgaggt
cagagtcccattagtctgaggtcacccacaatgcacagatattctggggatttctccgcc
tcgtttcagagcccccccacagcccgctccacttcccccttacccacctcctccccgcag
catcgcccgccaatcctcacccccaatctcaccgccaccccctccggctcgccctcccac
cagcccacgctgcagcccaactggacccgctccccctctccccagatacccacctccccc
tctcacttctctcaccctcctctctcccccacctactcaccctatcccacgtcacccaaa
caccgcactaagtatcgtggagccaagatttttgacttccagtgtacccctggtccagag
ctgaggtcgtctgtgtcacgccgacgcgcccccagccccctcatatactccacagaccgc
cccagccccgcccctcccagaccctcctccctccccatcctccccagcacccatgtctac
aacaccccctttgatttcccctcacccctcaccccttcatccccaagccacaccctagga
gactcttataacccctccacaccgcctctcttccccacatccccacaacctcccagtgcc
ctcctggtctcccgctccctttcacccacccagttcctctccggcgcctcctcgccctcc
atgcacatgcccccctctccgtcctgcctcagctatccccaccacacccctcttccccca
gccaaaccctttaccatcaagcccctgtcctactggactaggtgggacgtggccgactgg
ctggcctacctgaacctgggggagcaccgggagcgctttttggacaacgagattgacggc
tcccacctgccctccctcaccaaggacgacttcctggacctgggggtgacgcgcgtcggc
caccgcatgaacatcgaaagagcgctgaagacactgactgacaggtga
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integrated database retrieval system
