Oncorhynchus nerka (sockeye salmon): 115144283
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Entry
115144283 CDS
T07952
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9-like isoform X1
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00310
Lysine degradation
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
115144283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115144283
03036 Chromosome and associated proteins [BR:
one03036
]
115144283
Enzymes [BR:
one01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
115144283
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
115144283
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
115144283
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
115144283
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
PRDM2_PR
zf-H2C2_2
Teflon_C
SET
zf-C2H2_6
zf-H2C2_5
zf-C2H2_ZN142
ZNF428
zf-C2H2_ATbp_3rd
TRASH_HVO_1752_C
zf_C2H2_ZHX
zf-C2H2_15
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
115144283
NCBI-ProteinID:
XP_029541047
LinkDB
All DBs
Position
LG16:22685402..22690789
Genome browser
AA seq
970 aa
AA seq
DB search
MITKIISNYRFQEVQVVQSTVMSEEVIVVEWADPGVSEEGCQVQIITDNPSAVFSDSLVQ
NILVNTVVQGQEEGHQLLDDNGNDLYCEECHTSNKDQCDVQGGLSFMLDSPTPMGIPQRA
LLTLPHGLVVGRSSIPGAGLGVLNQGPAVAPGMHFGPCEGEVTTRERAVASDYSWEVLNS
KSESEYIDAARDTHSNWMRYVNCARNEEEGNLIALQYRGIVFFHCCRSIPPGDEFLFWPG
GRFIERFRDPSDQIWLRKCTPSEFRTDLSSQVFLCCQCQLTFTTKSYLQKHTEKSHSLDL
SPASELSELDNHLSNGNVKPDPMSSSSVGELAYRCPQCPKSFKQKGHVQRHMRNVHSKVK
PYCCIHCRRCFAQLSCLARHQIRVHGKKKKQGIEEFMSEEVRGKSQPPPDRTQETESSTS
DAPPTGTSVLFPCPHCPFSSTVESSLCQHMKSHDQREKVIKMQAFVEVRGESTHKPESPE
LPSDALHTEPQTDEPAQRGEEANSCSQCGKRFKQKGHFQRHMRAVHSNVRPYCCPQCRKC
FAQGYDLARHQLRVHGTKKKRRVVEVRGENLPRPPSDSAWEPEPPSNDSPTETQTGRAPS
QRLRNLRVKSTRTSKAKTKTNAPKQRQISTKKRSHSDPDSDDLDMKEMEGEAVGEEAQYS
CTECQGTYDNPESLRSHQCIQVVVGPPPYSCSTCGVTFKRYTTLKKHKLNKHPKENMRYC
CTRCGRFFSQAAGLQRHLEAEVCKDIQLSSEAVPCSYCQFSFTEERYLRKHVKRHHPEEY
VSQASGLGSGLIPPEQKAVEGGEVHLCFQCGKSYKYVKCFKSHRCFQSVTAKRYLCNDCG
KGFSCFYSLKQHQRIHTGEKPYRCSYCEKCFSHSGQLNVHVRIHTGEKPFLCTECGETFR
QSGDLKRHERKHTGVKPCTCPECGKSFSRPQSLKAHQLLHNGEKLYKCDQCVKRFSRNYH
LTRHHEKMHS
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgataacgaagattattagtaattacaggtttcaagaagttcaggttgtccagtctaca
gtgatgtctgaagaagtgatcgtcgtggagtgggcagatcctggtgtgtcagaggaggga
tgccaagtccaaatcattacagacaacccctctgcagtgttctctgacagcctggtccag
aatatattggtgaacactgtggttcaaggccaagaggagggtcatcaactactagatgac
aacggtaatgacctctattgtgaggagtgtcatacctccaacaaagaccagtgtgatgtc
caaggtggtctgtccttcatgctggactctcccactccaatgggtataccccagagggcc
ctcctcaccctaccccatgggctggtggtaggcaggtccagtatcccaggggcaggcctg
ggggtcctaaatcaagggccagctgtggccccaggaatgcactttggcccctgtgagggg
gaggtgactaccagggaaagagcagtagcaagtgactattcctgggaggtcttgaacagt
aagagtgaatctgagtacatcgatgctgcacgagacactcattccaactggatgaggtat
gttaactgtgctcgtaatgaagaggagggtaatctcatagcactccagtacagggggatt
gttttcttccactgctgccgctccatccccccaggagatgagttcctgttttggcctggg
ggcagattcatcgaaaggtttagggacccctctgatcaaatctggctccgaaagtgcacc
ccttcagagtttagaacagatttgtcgtctcaggttttcctctgctgtcagtgccagctt
actttcaccaccaagtcctaccttcaaaaacatacagagaaatcacactctctggaccta
tcacctgcatctgaactgagtgagcttgacaatcacctttctaacggcaatgtaaagcca
gacccgatgtcgtcgtcctctgtaggggagttggcctaccggtgccctcagtgtcctaag
agctttaagcagaagggccacgtccagagacacatgcgaaatgtccactccaaggttaaa
ccgtactgctgcatccattgtaggaggtgtttcgctcagctgtcttgtctggccaggcac
cagatacgagttcatggaaagaagaagaagcagggaatagaagagtttatgtctgaagag
gtcagagggaagagtcagccaccccctgacaggacccaggaaacagagtcctccacctcc
gatgctccacctacagggacctcggtcttattcccgtgtcctcattgcccattctcttct
actgtggagagcagcctttgtcagcacatgaagagccatgaccaaagggaaaaggtcatc
aaaatgcaggcttttgtagaggtcagaggggagagcacccataaacctgaatccccagaa
ctcccctctgatgctctacatacagagccccagacagatgagccggcacaaagaggtgag
gaggccaacagctgctctcagtgtgggaagcgctttaaacagaagggtcacttccaaaga
cacatgcgagctgtccactccaacgtcagaccctactgctgcccccagtgcaggaagtgt
tttgctcaggggtatgacctggcgaggcaccagctacgagttcacggaacgaagaagaag
cgtcgagtagtagaggtcagaggggagaatctgccccgaccgccctctgacagcgcctgg
gaaccggagcccccctccaatgattcacctacagagacccagactggaagagctccctct
cagagactaagaaacctcagagtaaagtccaccaggacctctaaagccaaaactaagaca
aacgcaccaaaacaaagacaaatcagtaccaagaagagatcccattcagatcctgattca
gatgatctggacatgaaggagatggagggagaggctgttggagaggaggcccagtacagc
tgcactgagtgtcagggaacctacgacaacccagagtctctcagatcccatcagtgcatc
caagtcgtggtggggccgccgccgtattcttgctctacatgtggggttaccttcaaacgg
tacaccaccctgaagaagcacaagctcaacaagcacccgaaggaaaatatgcgttattgc
tgcacccgctgtggaaggttcttcagtcaggctgccggtctacagcgccacctggaggca
gaagtatgtaaggacatccagctgagctctgaagctgtcccctgctcctactgccaattc
tccttcaccgaggagaggtacctccggaagcacgttaagagacaccaccctgaggagtat
gtctctcaagcctcaggcctgggctcaggcctcattccgccagagcagaaggccgtggag
gggggagaggtccacctctgctttcagtgtgggaagagctacaagtatgttaaatgcttc
aaatctcacaggtgtttccagtcagtcacagccaaacggtacttgtgcaatgactgtggg
aaaggtttctcttgtttctacagccttaagcagcatcagcggattcacacgggagagaag
ccataccgctgttcttattgcgagaagtgttttagccactctggacagctgaatgtgcac
gtgaggatacacacaggggagaagcctttcctgtgtacagagtgtggagagaccttccgt
cagtctggggatctgaagcgccatgagagaaaacacactggtgtgaaaccatgtacctgt
cctgaatgtgggaaaagcttcagtcgacctcagagtctgaaagctcaccagctgctgcac
aacggagagaaactgtacaagtgtgatcagtgtgtcaaaaggttttcacgaaattatcac
ctgacgagacaccatgaaaagatgcactcataa
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