Oncorhynchus nerka (sockeye salmon): 115144312
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Entry
115144312 CDS
T07952
Name
(RefSeq) ras-related protein Rab-4A isoform X1
KO
K07879
Ras-related protein Rab-4A
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115144312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115144312
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
one04031
]
115144312
Membrane trafficking [BR:
one04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
115144312
GTP-binding proteins [BR:
one04031
]
Small (monomeric) G-proteins
Rab Family
Rab2/4/14 [OT]
115144312
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Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
ATP_bind_1
RsgA_GTPase
Gtr1_RagA
AAA_7
SLFN-g3_helicase
AAA_16
AAA_22
SRPRB
ATPase
ATPase_2
Septin
NACHT
Motif
Other DBs
NCBI-GeneID:
115144312
NCBI-ProteinID:
XP_029541100
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All DBs
Position
LG16:23535802..23541078
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AA seq
213 aa
AA seq
DB search
MSETYDFLFKFLVIGNAGTGKSCLLHQFIEKRFKDDSNHTIGVEFGSKIINVVNKYVKLQ
IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCG
NKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDP
ERMGSGIQYGDAALRQLRSPRRGQAESAQECGC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagacatacgattttctgttcaaattcctagtgattggaaatgcaggaactgga
aaatcatgtcttcttcaccagtttattgagaagagattcaaagacgattcgaatcacacc
attggagtggagtttggctcaaagataatcaacgtggtaaacaaatatgtcaaactccaa
atctgggacactgcgggacaagagagattcaggtctgttacacggagttactacagaggt
gctgctggagccctgcttgtatatgacatcaccagccgggaaacctacaacgccctgacc
aactggctgacagacgccaggatgctggccagccaaaatattgtcataatcctgtgtggt
aacaagaaggacttggacgcagaccgggaggtcaccttcctggaggcgtctcgctttgct
caggaaaatgagcttatgtttctggagacaagtgctctgacaggggagaatgtagaggag
gcctttgtacaatgtgccaggaaaatcctcaacaagatagagtcaggagagttggacccg
gagaggatgggatcagggatccagtacggagacgccgcgctgcgccagctgcgctcccct
cgcaggggacaggccgagagcgctcaggaatgtggctgttag
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