Oncorhynchus nerka (sockeye salmon): 115144314
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Entry
115144314 CDS
T07952
Name
(RefSeq) ATP-binding cassette sub-family B member 10, mitochondrial-like
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115144314
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
one02000
]
115144314
Transporters [BR:
one02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
115144314
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_16
AAA_21
AAA
AAA_29
DUF87
Zeta_toxin
AAA_25
RsgA_GTPase
nSTAND1
AAA_33
AAA_5
P-loop_TraG
NB-ARC
Motif
Other DBs
NCBI-GeneID:
115144314
NCBI-ProteinID:
XP_029541103
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All DBs
Position
LG16:complement(23577931..23583627)
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AA seq
717 aa
AA seq
DB search
MGLLLLQLSKCPGVNILKREVHSRVHKLFWLECQTSRGQRGVSGKRFEPVARSSLSHPRR
CNSLVPCVPLRQFTIPPHLLRNSWTATVHFANYSSSTDSKQTTQQEVDSKDMQSTETKQS
PTRIPTEDVKRILQLAHPERLRLSAAVGFLMVSSAVTMSAPFFLGQVIDTIYTSSSEDFS
ASLRSLCIMLSGVFLCGGAANAARVYLMQISGQQIVRNLRVFLFSSILRQEVGFFDKTRT
GELINRLSADTALIGRSVTDNLSDGLRAVAQATAGVSMMFYVSPSLAAFVLLIVPPMAGL
AVIYGRYLRSISKRTQDSLAEATQLAEERISNMRTVRAFGKELTEVAKYTEKANYVLHLA
KQEAVLRAGFFGATGLSGNIIILSVLYKGGLLMASEHMTVGELSSFLMYAFWVGISIAGM
SSFYSELMKGFGAGARLWELLDRKPEFPLNEGIVLRPEQLKGQLEFQNVSFAYPTRKDAP
IFQDLSLSVPAGSVMAVVGPSGSGKSTLVSLLLRLYDPVAGVITIDGHDVRDLNPYWLRS
HIGTVSQEPVLFSCSIAENIAYGAPDSGTVTVQEIHRAAQIANAYEFVRGFPKGFDTVVG
EKGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEFLVQEALERLMDGRTVLII
AHRLSTIQNADAVAVLDQRRVVECGQHAQLLGNRQGLFRKLMEKQAFLQEGQKQALR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgggactgttgctgttgcaattgtcaaaatgtccaggcgtgaatattttgaagcgcgag
gttcactcccgtgtacataaactattttggttagaatgccagacgtccaggggacaacga
ggggtgagtgggaaaaggttcgaacctgtggcacgctcttcgctttcacacccgaggaga
tgcaactctcttgtgccctgtgtaccacttagacagttcaccatacccccccatttgttg
aggaattcatggacagcaactgtacactttgccaactacagctcttcgacagactcaaaa
caaacgacacaacaagaagttgacagcaaagatatgcagtcaacggaaacaaaacaatcc
ccaactcggatacccactgaggatgtcaaaaggattttacaacttgcccaccctgagcgc
ttgcgactgtcagcggctgtgggcttcctaatggtctccagcgctgtcacaatgtcggcg
cccttcttcctgggccaagtcattgacaccatctacaccagctcttcagaggacttcagt
gcctccctccgctctctgtgtatcatgctttcaggggtattcctttgtgggggcgccgct
aatgctgcccgtgtctacctcatgcaaatctcaggtcaacagattgtgagaaatctacgt
gtattcctattctcctcgattctgaggcaggaggtaggtttctttgataagacccgtacc
ggggaactcattaaccgcctatctgcagacacggcactcatcggccgctccgtcacagac
aacctttctgacgggctccgcgctgtcgcccaggcaacagctggggtcagcatgatgttt
tacgtgtcaccaagtttagcagcctttgtgctgctgattgtgcctcctatggctggccta
gctgtcatatatgggagatacctgcgctccatatccaaacgtacacaggactctctggct
gaggccacacagttggcagaagaacgcatcagcaacatgaggacagttcgggcgtttggt
aaggagctgacagaggtggccaagtatacggagaaggccaactatgttctccacctggcc
aaacaggaagccgttttgagggctggcttctttggcgcgactggactcagtggcaacatc
atcatcctgtcagtgctgtataagggagggctattgatggccagtgaacacatgactgtg
ggagagctctcttccttcctcatgtacgccttctgggtgggcattagcattgcaggtatg
agctcgttctactctgaactgatgaagggctttggcgcaggggcacgtctttgggagcta
ctggacaggaagcccgagttccccctcaatgagggtattgtactgaggccggagcagctt
aagggtcaactggagttccagaatgtctcctttgcctacccaacccgcaaagacgccccc
atcttccaggacctgagtctctctgtgcctgctggctccgtcatggccgtggtagggccc
agcggatcgggcaaatccactctggtctccctgctgctcaggctctacgacccagttgca
ggtgtgatcactatcgacgggcatgatgtgagagatttgaatccttattggctgaggagt
cacattggaactgttagtcaggagcctgtactcttctcctgttccatcgctgagaacatt
gcctatggagcgcccgactctggcacggtcacagttcaggaaatccaccgggctgcacag
atcgccaacgcttatgagtttgtccgaggtttcccaaaaggctttgacactgtggtggga
gagaagggtgttcttctctcaggtggtcagaaacagagaattgctattgcaagggctctg
cttaagaaccccaagatacttctacttgatgaggctacaagtgccctggatgcagagaat
gagttcctggtccaggaggctctagagcggctcatggatgggcgcacagtgctgatcatc
gcccaccgcctctccaccatccagaacgctgacgccgtggctgtgctggaccagcggcgt
gtggtggagtgtgggcagcacgcacagctcctgggcaaccgccaaggcctcttcaggaag
ctgatggagaaacaagcattccttcaagaggggcaaaagcaagcgttgcgttga
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