Oncorhynchus nerka (sockeye salmon): 115144352
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Entry
115144352 CDS
T07952
Symbol
lrpprc
Name
(RefSeq) leucine-rich PPR motif-containing protein, mitochondrial
KO
K17964
leucine-rich PPR motif-containing protein, mitochondrial
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
one03029
]
115144352 (lrpprc)
Mitochondrial biogenesis [BR:
one03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
115144352 (lrpprc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPR_2
PPR
PPR_long
PPR_3
PPR_1
TPR_MalT
ARM_TT21
Unstab_antitox
Motif
Other DBs
NCBI-GeneID:
115144352
NCBI-ProteinID:
XP_029541170
LinkDB
All DBs
Position
LG16:complement(24850803..24925471)
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AA seq
1489 aa
AA seq
DB search
MPFHSSHFRLNMAALLRSARLLKCSPSGFLQRTGTNRNGPQLSRLYSGAIGGKGSGVCSR
QIVPGPYSVHRCVWPYAGVRDYAMVTEQRGLPTDESSLGVRSKQAQQFDWALAKLDSSVR
RTGRITKTLLLRIFHDICRTGYPSGNQALLLLRSCGSLLPEMPLAERTELAHRIWDKLQE
LGASYDASHYNALLKVYLQNEFKFSPTEFLAKMEAAGVQPNRVTFQRLIAAYCHDGDIEG
ASTILGFMKSKDLPITEAVFNSLVTGHARAGDMESSESILQVMKGAGIEPGPDTYVALLN
AYAERGDMDKIKQTLEAVENTDTSLMDRDLMQVVFSLSKAGHQQHVPEIVERMRHERGYV
PDAMNLCLSLITQGQEDTAFTVLKTFPTLQQETQGGDSPTLGNFFLRHCVNMDKPMDKVA
RYCKELQDSSYHATPLQFTLYCCLEAKKTATAVEVMKMMKEQGQPIRPHYFWPLLTQHAK
DQNTTGIMEVLKGMQELDVPADVETMSFYVLPAFPNIDAARDAFKEMGCSLESEGFLSSE
MRSEASSGNLAGLLVMMSAPSFPALDLSTFRGSLIQGFRRSDDLESMAKITELLYKDERF
SQGATGSAEAVSYFLYNLMDSMTEAEVQAQEDKLRQYFNQLKSMGIIIPGNIYRGIRNLL
DSYHVPELIKDVIALVDSQEPLNFSDNRVVILDGKVLALESRLAELKADSKPVGATLKQL
ILTLCAEEKLDRALELKKQHEADMVAGSYATLIHLCCRHDNVEEALNLKRELSRKDSSVS
LDSSKYVALVKVLTKQGRLEEAVDMLKEMKEKEVVVRDTTVTLLFHVLNAAAMKGDVVAV
RRLQDTIFTLGLATPTANLCSPLVSAHLETKDLGGALEAAMECQKQYGQLPRIHDVICGL
VERGDTELLQKAMDFVSQERGEMTMLYDLFFAFMQTGRHREARKIIETPGLRARPGRLQW
YAEKCINGNQMESLESMVDMTAKLFECDRDELYHYVLRLCKDTNDWRKAEATWTKMQEEN
VIPRERTLRILADILKSNGQEVPFEVPEVWYEQAADREAQSETKPEGSKGKATKSASTQA
ATAENNPADYQFRLLTLCKKGKAKEAYDMLKDIDRKGVTLGPAPYDSLIRALLAEGSMEN
AMVVKEIAVGRVPGFKLNDIANSLLIITQVKRGLAKDGMSTLKSMLQGDQVPSKLSVTRL
VQSLGSHGDVQGIQEVEVLMKGLGTPLNLSSMVFLNNTAMAHIKNGDLDSAVEGLEAVYT
QGDGPQGPAASMAFVFRKVLEENNGAALDKLSAMAERLANHFSSYRAASDLFLQLLEANM
VEDAKFMLARCNAVAEQKEILVSYMSRLAQKPGQVGKIKTLMTLIPDFTEKETLYPYLMK
CYGVDNDLVSAKALYQQMQTEGVEADELCLKRLAVLYRNAGETVPFTEPPETFKFYAEKL
KEKSKGSQPSNRSGGIRLSATLLHSVLFVLLGFFFISCENRSCGSITGC
NT seq
4470 nt
NT seq
+upstream
nt +downstream
nt
atgcccttccattcctcgcactttaggttaaacatggctgcgctcttgagatctgcacga
cttctgaaatgttcgccatcgggctttcttcaaagaacagggacgaacagaaatggaccg
caactcagtcgactgtacagtggagcgatcggtggtaaaggctctggagtctgttcaaga
caaatcgtcccaggcccatacagtgtacacaggtgtgtgtggccctatgcaggggtacgt
gactacgccatggttacagagcagcgggggctacccactgatgagtccagtttgggtgtg
cgatctaagcaggcccagcagtttgactgggccctggcaaagcttgacagttcagtgagg
aggacgggacgcatcaccaagaccttgctgctgcgcatcttccacgacatctgccgcaca
ggctaccctagtgggaaccaggccctgctcctcctgcggagctgtggctctctactgcct
gagatgcccctggcggaacgcactgagctggcccaccgaatctgggacaagctacaggag
ctgggtgcctcatacgatgccagtcattacaacgcactgctcaaggtatacctgcagaac
gagttcaagttctcccccacagagttcctggccaagatggaggcagccggcgtgcagccc
aacagagtgacctttcagagactgattgcagcctactgccatgatggggacattgagggt
gccagtacaatcctgggtttcatgaagagcaaggacctgccaatcacagaggctgttttc
aactccttagtgacaggtcatgcacgtgcaggtgacatggagagttcagagagcatcctg
caagtcatgaagggggcaggcatcgagccgggccctgacacatatgtggcactgctcaac
gcctatgcagagagaggggatatggacaagatcaaacagactctggaggctgtggagaac
acagacaccagtctgatggacagagacctgatgcaggtggtattcagcctgtccaaggca
ggccatcagcagcacgtaccagagatagtggagcgtatgagacacgagagaggatatgtt
ccagatgctatgaacttgtgtctgagcctgatcacccagggccaggaagacacagccttc
accgtgctcaagaccttccccaccctgcagcaagagacgcagggtggagactcccccacc
ctgggcaacttcttcctgcgtcactgtgtcaacatggacaagccaatggataaggtggcg
cgctactgcaaggagctgcaggactccagctaccacgctactcccctgcagttcaccctc
tactgctgcctggaggccaagaagactgctactgcagtggaggtgatgaagatgatgaaa
gaacaggggcaacccatcagacctcactacttctggcccctcctcacacaacatgccaag
gaccagaacacaacagggatcatggaggtgttgaagggcatgcaggaattggatgtacca
gctgatgtagagacaatgtccttctacgttctgcctgctttcccgaacatagacgctgcc
cgggatgcattcaaggaaatgggctgctccttggagtctgagggtttcttgtcctctgag
atgcgctctgaggctagtagtgggaacctggcaggactgttggttatgatgtctgctccc
tccttccctgccctggacctgagtaccttcagaggaagtctcatccagggcttcagacgg
tctgacgatctggagagcatggccaagatcactgagctgctgtacaaagatgagcgtttc
tctcagggagctacaggatctgctgaggctgtgtcctactttctctataacctgatggac
agcatgactgaggcagaggtgcaggctcaggaggacaagctcaggcagtacttcaaccag
ctgaagagcatgggtatcatcatcccagggaacatctacagagggatcagaaacctgcta
gactcttatcacgtgcctgagctcatcaaggatgtcatcgccctggtggacagccaagaa
cctctgaacttctcagacaacagagttgttattctggatggcaaggttttggcgctggag
agcaggctggctgagctgaaggctgacagtaaaccagtaggcgctaccctgaaacaactc
atcctcactctgtgtgccgaggagaaactggacagggctctggagctgaagaaacaacac
gaggcagacatggttgccgggagctacgccaccctcatccacctctgctgtcgccatgac
aatgtggaagaggcactgaacttgaaaagagagctgagccgtaaggattcctctgtgtct
ctggattccagcaagtatgtggctctagtcaaggtcctgaccaagcagggcagactggaa
gaggcggtggacatgctgaaggaaatgaaggagaaggaggtggttgtgagggacaccaca
gttaccctgctcttccatgtcctcaatgctgcggccatgaagggggatgtggtagctgtc
cgcaggctccaagacaccatcttcaccctgggcctggccacgcccaccgccaacctctgc
tcccccctggtctcagcccacctggagactaaggaccttggcggggctctggaggcagct
atggagtgtcagaagcagtatggacaactcccacgtatccacgacgtcatctgtggcctg
gtggagaggggagacacggagctcctacagaaagcgatggactttgtgagccaggagcga
ggcgagatgacaatgctgtacgacctctttttcgccttcatgcagactggccgccaccgg
gaggcccgcaaaatcattgagactccaggtttaagggccagaccaggacgcctgcagtgg
tacgctgagaagtgcatcaacggcaaccagatggagtcgttggagagcatggtggatatg
acagccaagctgtttgaatgtgaccgcgatgagctgtatcactacgtgttgcggctctgc
aaggacacaaacgactggcgcaaggcggaggccacctggaccaagatgcaggaggagaat
gtgataccaagagagaggaccctgcgcatactggctgacatcctcaagagtaatggacag
gaggtgcctttcgaggtgcctgaggtgtggtatgagcaggctgcagacagagaagcacag
tcagagaccaagcctgaagggtcaaagggcaaagccaccaagtcagccagcacccaggct
gctactgcagagaacaaccctgctgactaccagttcagactgctcaccctctgcaagaag
ggcaaggctaaagaggcctatgatatgctgaaggatattgataggaagggtgtgaccctg
ggcccggccccctacgacagtctgatccgggctctgctggccgagggtagtatggagaac
gccatggtggtcaaagagattgccgtaggccgtgtcccagggttcaagctgaatgacata
gccaacagcctcctcatcattacacaggttaagagagggctagccaaagatggcatgtcc
acactcaagtccatgctgcagggagaccaggtgccctcaaaactgtccgtcacacgattg
gtccaatccctcggtagccatggggatgtccaaggcatccaggaagtggaggttctgatg
aaggggttgggcacgcccctcaacctgtcaagcatggtatttctcaacaacactgccatg
gcacacatcaaaaatggagacctggactctgcagtggagggcttggaggctgtctacaca
cagggtgatgggcctcagggtccagctgccagcatggcctttgtcttcaggaaggtgttg
gaggagaacaatggcgctgctctggataaattaagtgccatggcagagaggctggcaaat
cacttttcatcgtacagagctgcttcagacctcttcctacagctgctggaggctaacatg
gtagaggacgccaagttcatgctggcccgctgtaatgctgtggctgaacagaaggagatt
ctggtctcttacatgtccaggctggcccagaaaccaggccaggtgggcaagatcaagacc
ctgatgactctcatccctgacttcacagagaaggagacgttgtatccctacctgatgaag
tgctatggtgtggacaacgacctggtgtcggctaaagccctgtaccagcagatgcagacg
gagggagtggaggctgatgagctgtgtctgaagagacttgccgtgctgtacaggaacgca
ggagagaccgtcccctttactgagccacctgagacgtttaagttttatgcagaaaagctg
aaggagaaatccaagggatcacagccgagcaatcgcagtggaggaataagactgtccgct
actcttcttcattctgtcctttttgttttgttgggttttttttttataagctgtgaaaac
agatcttgtggaagtattactggatgttag
DBGET
integrated database retrieval system
