Oncorhynchus nerka (sockeye salmon): 115144364
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Entry
115144364 CDS
T07952
Name
(RefSeq) polycomb group RING finger protein 5-B-like isoform X1
KO
K11489
polycomb group RING finger protein 5
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115144364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115144364
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
115144364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-RING_5
zf-RING_10
zf-C3HC4_3
zf-Nse
TRAF3_RING
E3_UbLigase_R4
zf-rbx1
zf-RING_6
Actin_micro
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
115144364
NCBI-ProteinID:
XP_029541191
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All DBs
Position
LG16:complement(25903784..25911637)
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AA seq
235 aa
AA seq
DB search
MATQRTPLVKDFNHFITCYVCRGYLIKPTTVTECLHTFCKSCIIQHFEDSNDCPKCGIQV
HETNPLEMLRLDNTLEEIIFKLVPGLRDKEEQQEIDFWRKNTSKENGQGDCLGSRLGLSD
DEDGDEDGQDYHRSDPQIAICLDCLHNNGYAADDTVKCLMKKFLRCSSRVTVGTIKKFLS
LKLKLSSSCELDVLCNGEIMGKDHTLEFIYMTRWRLHGDNTYPMVLEYRPRIDFG
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggccactcagaggacacccctggtcaaagactttaaccacttcattacctgctacgtg
tgcagaggttacctgatcaaacccaccacggtcactgagtgccttcacacattttgtaag
agctgtatcatccagcactttgaagacagtaatgactgtcccaaatgtggcattcaagtc
catgaaaccaaccctctagagatgctaaggttggacaatactcttgaggaaatcattttc
aagcttgtacctggattacgagacaaagaggaacagcaggagattgatttctggaggaag
aatacatccaaagaaaatggacaaggagactgccttgggtctaggcttgggctcagtgat
gatgaggatggtgatgaagatggtcaggattatcacaggagtgacccccagatagccatc
tgcctggactgtctccacaacaatggatatgctgcagacgacacagtaaagtgtttaatg
aagaagttccttcgctgctctagtcgagtcacggtgggaaccatcaagaagtttctcagt
ctaaagttaaagctttcaagctcttgtgagctggatgtgctgtgtaacggggagatcatg
ggtaaggaccacactctggagttcatctacatgacccgctggaggctgcacggtgacaac
acatatcccatggtcctggagtacaggccacgaatagactttggctga
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