Oncorhynchus nerka (sockeye salmon): 115144373
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Entry
115144373 CDS
T07952
Symbol
itga9
Name
(RefSeq) integrin alpha-9
KO
K06585
integrin alpha 9
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04510
Focal adhesion
one04512
ECM-receptor interaction
one04514
Cell adhesion molecules
one04810
Regulation of actin cytoskeleton
one04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115144373 (itga9)
04514 Cell adhesion molecules
115144373 (itga9)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115144373 (itga9)
09142 Cell motility
04820 Cytoskeleton in muscle cells
115144373 (itga9)
04810 Regulation of actin cytoskeleton
115144373 (itga9)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115144373 (itga9)
Cell adhesion molecules [BR:
one04515
]
Integrins
Integrin alpha subunits
115144373 (itga9)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP
FG-GAP_3
FG-GAP_2
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
115144373
NCBI-ProteinID:
XP_029541207
LinkDB
All DBs
Position
LG16:complement(26137831..26291773)
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AA seq
1030 aa
AA seq
DB search
MRKRMAHFLNQKRSLLNVLYVYLSVSVVHSYNIDLEHPIVFRGPDSSFFGYSVLEHYHDN
TRWVLVGAPKANSSHSSSVHTPGAVFKCRVHSNPERRCTEMDLGRGNKPRESCGKTCQGD
RDDEWMGVSLARQDKSNGKILACAHRWKNVYYDSELILPHGYCSIIPPTLQGRTQALIPC
YEDYKQKYGEEHGSCQAGIAGVFTEELVVMGAPGSYYWTGTVKVYNLTSSTFYNPNKEEV
DSHRYSYLGYAVTAGHFSSPNFIDVAAGAPQHSGGGKVYIFRIDGGSLVKIFQASGKMMG
SYFGSSLCAVDLNRDGLSDLLVGAPMHSTLRDEGQVSVYLSKGNGVMEQAELLNGDDAYN
AHFGECITAIGDIDDDGYQDVAIGAPKEDDYGGAVYIYHGDAAGIVNKYSMRLSGRSVNP
AFQMFGQSISGNVDMDGNGYLDITIGAFMADSVVLLRSRPVITVDVSIYLPVSINISVPQ
CHEGPQHLNCFNATVCLLFRGKHLPGQIELLYNLTADVDKRQRSQPSRVYLVQNGAQMSS
VSNELSLDINTVECHQYTAYVKKDVKDVFTAITFEVAYTLGKHVVDGHLDNDLPALTPVL
RWKKGDKIAAKNETWFEKNCLSDDCAADLRLHGKLLLSGLHVHPHLALGGVRNVSLNVTI
SNAGDDAYDTNIYFNFSREVFYINYWQREEKGISCGLVDLDFLKCSVGFPFMRAQTKYHL
AVIFDTSRLSGENETLQFVVHAKSANPEHKLLDNTLDLSIPLVHEVDTTITGVVNPTSFE
YGNSIDASRFVQLEDMECNFQPLNFTFQVINNGPSRLPGSIVDIRIPNRLAGNGADMFLI
MDSQVAEGRGNCTPHRNPQPCTIPQDRENIFHTIFAFFTKSGRRVLDCDRPGRACLTISC
NLGSQTKEDAISIDVKLLLNTEILNRDSSSLIQFVTRGNVRVDGRAMEVPEGLSEDTSLV
FEALHSQEPRGYVVGWIIAISLLVGILIFLLLAVLLWKMGFFRRRYREIIEAEKNRKDSD
ESWDWVEKNH
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaaaggatggcccattttctgaatcagaagaggagccttttgaatgtgctctac
gtgtatttgtctgtttctgtagttcactcctacaacattgatttagaacatcctattgtg
ttccgtggacctgactcgagtttctttggatattctgttctggagcactatcatgacaat
acgcgctgggtgctggtaggggcccccaaggccaactcttcccacagcagctctgttcac
acccctggagccgtgttcaagtgccgtgtccacagcaacccagagagacgctgcactgag
atggacctaggcagagggaacaagcccagggagtcttgtgggaagacgtgccagggagac
agggatgatgagtggatgggggtcagcctcgcccggcaggacaaatccaatggaaaaata
ctggcctgtgcccaccgttggaagaacgtctactatgactctgagctcatccttccccat
ggttactgttccattatccctcctacgctacagggccggacccaagccctcatcccctgc
tatgaagactataagcagaagtatggggaagagcacggctcgtgccaagcggggatagcg
ggcgtttttactgaggagctggtggtgatgggagctccaggatcatactactggacagga
acagtcaaggtctacaacctgacctccagcaccttctacaaccccaacaaagaagaagtc
gactcacacagatacagctatctaggctatgctgtgactgctggacacttctcctctcct
aacttcatagatgtggctgcaggagctccacaacacagtggaggaggaaaagtttacatt
ttcagaatagatggtgggtctttggtgaagatctttcaagcctcagggaaaatgatgggc
tcttactttggctcctcattgtgtgcagttgacctgaaccgggatggcctgtcggacctg
ctggttggagcgcccatgcacagcacgctacgggacgagggacaggtctctgtctacctc
agcaagggcaatggggtgatggagcaggctgaactcttaaatggagatgatgcctacaat
gcacactttggagagtgcatcactgcaatcggagacatcgatgacgatgggtaccaagat
gtggccataggagcacccaaagaagatgactacggtggagcagtctatatttaccatggc
gatgccgcaggaatcgtcaacaaatattctatgaggctgtctggacggagtgtaaacccc
gccttccagatgttcggccaatcaatatctggcaatgtggacatggacggcaatggatat
ctagacattaccattggtgcttttatggctgatagtgtggtgttattgaggtcccgaccg
gtgatcactgtggacgtgtccatctacctacctgtctccatcaacatctctgttcctcag
tgtcacgagggaccacagcacctcaactgtttcaacgctacagtctgcctgctcttcaga
ggaaaacacctgcctggacagatagagttgctgtataacctgacagctgatgtggataag
agacagaggagccagccttctagagtgtacttggttcagaacggagcccagatgagctct
gtgagcaacgagctcagtctggacatcaacacagtggagtgccaccagtacactgcatac
gttaagaaggacgtgaaagatgtgttcacagccatcacctttgaagtggcctacaccctg
gggaagcatgtggtggatggacatcttgacaatgacctgcctgctctcacacctgtacta
cgctggaagaaaggagacaagatagcagcaaagaatgagacatggtttgagaagaactgc
ctgtctgatgactgtgctgctgacctgagactccatgggaaactgctgctttctgggctc
cacgtccatccccaccttgccctaggaggagtgaggaacgtctctctgaacgtgaccatc
tccaacgcaggggacgatgcctacgacaccaatatctacttcaacttctccagagaggtc
ttctatatcaactactggcagagggaagagaagggtatttcctgtggtcttgttgattta
gacttcctcaaatgcagcgtgggatttcccttcatgagagcacagactaagtatcatctt
gcagtgatcttcgacacaagccggctttcaggggaaaatgagacattgcagtttgtagtt
catgcaaaaagtgccaaccctgaacataaactgttggacaacaccttggatctttctatc
ccactggtccatgaggtagacacaactatcactggtgtggtgaacccgacgtcctttgag
tatgggaactccatcgatgcctctcgcttcgtccagctggaggacatggagtgtaacttc
cagccactcaacttcacctttcaggtgatcaacaatggccccagcaggctccctggctcc
atagtggacatcaggatccccaaccggctggctggcaatggggccgacatgttcctcatc
atggactcacaggtggcggaggggcgagggaactgtaccccccacaggaatccccagccc
tgtaccatcccccaggacagagagaatatcttccacaccatcttcgccttcttcaccaag
tctggccgcagggtcctggattgtgaccggccagggagagcatgtttaactatctcatgt
aatctaggctcccagaccaaagaggatgctatcagtatagatgtgaaacttctactaaac
acagagatactgaatcgggacagctcgtcgttgatccagttcgtgacgaggggtaatgtg
agagtggacgggagggccatggaggtaccagagggcctatcagaagacacttcactggtg
ttcgaggcgctccacagccaggagccaaggggctatgttgttggttggatcattgccatc
agcctgctggtgggaatactcatcttcctactgctggctgtgctgctctggaagatgggt
ttcttccgccggcgctaccgggaaatcatagaggctgagaaaaacaggaaggacagtgac
gagagctgggattgggtggaaaagaaccactga
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integrated database retrieval system