KEGG   Oncorhynchus nerka (sockeye salmon): 115144373
Entry
115144373         CDS       T07952                                 
Symbol
itga9
Name
(RefSeq) integrin alpha-9
  KO
K06585  integrin alpha 9
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04510  Focal adhesion
one04512  ECM-receptor interaction
one04514  Cell adhesion molecules
one04810  Regulation of actin cytoskeleton
one04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:one00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    115144373 (itga9)
   04514 Cell adhesion molecules
    115144373 (itga9)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115144373 (itga9)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    115144373 (itga9)
   04810 Regulation of actin cytoskeleton
    115144373 (itga9)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:one04515]
    115144373 (itga9)
Cell adhesion molecules [BR:one04515]
 Integrins
  Integrin alpha subunits
   115144373 (itga9)
SSDB
Motif
Pfam: Integrin_A_Ig_1 Integrin_A_Ig_2 Integrin_A_Ig_3 FG-GAP FG-GAP_3 FG-GAP_2 Integrin_alpha
Other DBs
NCBI-GeneID: 115144373
NCBI-ProteinID: XP_029541207
LinkDB
Position
LG16:complement(26137831..26291773)
AA seq 1030 aa
MRKRMAHFLNQKRSLLNVLYVYLSVSVVHSYNIDLEHPIVFRGPDSSFFGYSVLEHYHDN
TRWVLVGAPKANSSHSSSVHTPGAVFKCRVHSNPERRCTEMDLGRGNKPRESCGKTCQGD
RDDEWMGVSLARQDKSNGKILACAHRWKNVYYDSELILPHGYCSIIPPTLQGRTQALIPC
YEDYKQKYGEEHGSCQAGIAGVFTEELVVMGAPGSYYWTGTVKVYNLTSSTFYNPNKEEV
DSHRYSYLGYAVTAGHFSSPNFIDVAAGAPQHSGGGKVYIFRIDGGSLVKIFQASGKMMG
SYFGSSLCAVDLNRDGLSDLLVGAPMHSTLRDEGQVSVYLSKGNGVMEQAELLNGDDAYN
AHFGECITAIGDIDDDGYQDVAIGAPKEDDYGGAVYIYHGDAAGIVNKYSMRLSGRSVNP
AFQMFGQSISGNVDMDGNGYLDITIGAFMADSVVLLRSRPVITVDVSIYLPVSINISVPQ
CHEGPQHLNCFNATVCLLFRGKHLPGQIELLYNLTADVDKRQRSQPSRVYLVQNGAQMSS
VSNELSLDINTVECHQYTAYVKKDVKDVFTAITFEVAYTLGKHVVDGHLDNDLPALTPVL
RWKKGDKIAAKNETWFEKNCLSDDCAADLRLHGKLLLSGLHVHPHLALGGVRNVSLNVTI
SNAGDDAYDTNIYFNFSREVFYINYWQREEKGISCGLVDLDFLKCSVGFPFMRAQTKYHL
AVIFDTSRLSGENETLQFVVHAKSANPEHKLLDNTLDLSIPLVHEVDTTITGVVNPTSFE
YGNSIDASRFVQLEDMECNFQPLNFTFQVINNGPSRLPGSIVDIRIPNRLAGNGADMFLI
MDSQVAEGRGNCTPHRNPQPCTIPQDRENIFHTIFAFFTKSGRRVLDCDRPGRACLTISC
NLGSQTKEDAISIDVKLLLNTEILNRDSSSLIQFVTRGNVRVDGRAMEVPEGLSEDTSLV
FEALHSQEPRGYVVGWIIAISLLVGILIFLLLAVLLWKMGFFRRRYREIIEAEKNRKDSD
ESWDWVEKNH
NT seq 3093 nt   +upstreamnt  +downstreamnt
atgcgcaaaaggatggcccattttctgaatcagaagaggagccttttgaatgtgctctac
gtgtatttgtctgtttctgtagttcactcctacaacattgatttagaacatcctattgtg
ttccgtggacctgactcgagtttctttggatattctgttctggagcactatcatgacaat
acgcgctgggtgctggtaggggcccccaaggccaactcttcccacagcagctctgttcac
acccctggagccgtgttcaagtgccgtgtccacagcaacccagagagacgctgcactgag
atggacctaggcagagggaacaagcccagggagtcttgtgggaagacgtgccagggagac
agggatgatgagtggatgggggtcagcctcgcccggcaggacaaatccaatggaaaaata
ctggcctgtgcccaccgttggaagaacgtctactatgactctgagctcatccttccccat
ggttactgttccattatccctcctacgctacagggccggacccaagccctcatcccctgc
tatgaagactataagcagaagtatggggaagagcacggctcgtgccaagcggggatagcg
ggcgtttttactgaggagctggtggtgatgggagctccaggatcatactactggacagga
acagtcaaggtctacaacctgacctccagcaccttctacaaccccaacaaagaagaagtc
gactcacacagatacagctatctaggctatgctgtgactgctggacacttctcctctcct
aacttcatagatgtggctgcaggagctccacaacacagtggaggaggaaaagtttacatt
ttcagaatagatggtgggtctttggtgaagatctttcaagcctcagggaaaatgatgggc
tcttactttggctcctcattgtgtgcagttgacctgaaccgggatggcctgtcggacctg
ctggttggagcgcccatgcacagcacgctacgggacgagggacaggtctctgtctacctc
agcaagggcaatggggtgatggagcaggctgaactcttaaatggagatgatgcctacaat
gcacactttggagagtgcatcactgcaatcggagacatcgatgacgatgggtaccaagat
gtggccataggagcacccaaagaagatgactacggtggagcagtctatatttaccatggc
gatgccgcaggaatcgtcaacaaatattctatgaggctgtctggacggagtgtaaacccc
gccttccagatgttcggccaatcaatatctggcaatgtggacatggacggcaatggatat
ctagacattaccattggtgcttttatggctgatagtgtggtgttattgaggtcccgaccg
gtgatcactgtggacgtgtccatctacctacctgtctccatcaacatctctgttcctcag
tgtcacgagggaccacagcacctcaactgtttcaacgctacagtctgcctgctcttcaga
ggaaaacacctgcctggacagatagagttgctgtataacctgacagctgatgtggataag
agacagaggagccagccttctagagtgtacttggttcagaacggagcccagatgagctct
gtgagcaacgagctcagtctggacatcaacacagtggagtgccaccagtacactgcatac
gttaagaaggacgtgaaagatgtgttcacagccatcacctttgaagtggcctacaccctg
gggaagcatgtggtggatggacatcttgacaatgacctgcctgctctcacacctgtacta
cgctggaagaaaggagacaagatagcagcaaagaatgagacatggtttgagaagaactgc
ctgtctgatgactgtgctgctgacctgagactccatgggaaactgctgctttctgggctc
cacgtccatccccaccttgccctaggaggagtgaggaacgtctctctgaacgtgaccatc
tccaacgcaggggacgatgcctacgacaccaatatctacttcaacttctccagagaggtc
ttctatatcaactactggcagagggaagagaagggtatttcctgtggtcttgttgattta
gacttcctcaaatgcagcgtgggatttcccttcatgagagcacagactaagtatcatctt
gcagtgatcttcgacacaagccggctttcaggggaaaatgagacattgcagtttgtagtt
catgcaaaaagtgccaaccctgaacataaactgttggacaacaccttggatctttctatc
ccactggtccatgaggtagacacaactatcactggtgtggtgaacccgacgtcctttgag
tatgggaactccatcgatgcctctcgcttcgtccagctggaggacatggagtgtaacttc
cagccactcaacttcacctttcaggtgatcaacaatggccccagcaggctccctggctcc
atagtggacatcaggatccccaaccggctggctggcaatggggccgacatgttcctcatc
atggactcacaggtggcggaggggcgagggaactgtaccccccacaggaatccccagccc
tgtaccatcccccaggacagagagaatatcttccacaccatcttcgccttcttcaccaag
tctggccgcagggtcctggattgtgaccggccagggagagcatgtttaactatctcatgt
aatctaggctcccagaccaaagaggatgctatcagtatagatgtgaaacttctactaaac
acagagatactgaatcgggacagctcgtcgttgatccagttcgtgacgaggggtaatgtg
agagtggacgggagggccatggaggtaccagagggcctatcagaagacacttcactggtg
ttcgaggcgctccacagccaggagccaaggggctatgttgttggttggatcattgccatc
agcctgctggtgggaatactcatcttcctactgctggctgtgctgctctggaagatgggt
ttcttccgccggcgctaccgggaaatcatagaggctgagaaaaacaggaaggacagtgac
gagagctgggattgggtggaaaagaaccactga

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