Oncorhynchus nerka (sockeye salmon): 115144382 Help Entry 115144382         CDS       T07952                                  Symbol nrxn1 Name (RefSeq) neurexin-1 isoform X1   KO K07377   neurexin Organism one  Oncorhynchus nerka (sockeye salmon) Pathway one04514   Cell adhesion molecules Brite KEGG Orthology (KO) [BR:one00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04514 Cell adhesion molecules     115144382 (nrxn1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:one04131]     115144382 (nrxn1) Membrane trafficking [BR:one04131]  Exocytosis   Calcium ion-dependent exocytosis    Others     115144382 (nrxn1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Laminin_G_2 Laminin_G_1 Laminin_G_3 EGF Syndecan Motif Other DBs NCBI-GeneID:  115144382 NCBI-ProteinID:  XP_029541220 LinkDB All DBs Position LG16:complement(27212866..27831908) Genome browser AA seq 1507 aa AA seqDB search MVLAMRHGAHLIWVGLLLCCMVDMGATMEFTGAEGQWARFPMWNACCESEMSFNMKTKSS HGLLVYFDDEGFCDFLELLIHNGKLSLRFSIFCAEPATVLTNTAVNDSQWHAVTIWRNFK NTTLMVDNEVKWVEVKSKRRDMTVFSHLFLGGIPPELRSVALRLTSAVVKDHVPFTGWIT DIKVNNTESALLNSAGVINDLCGAAANMCLNGGVCNVINDEPTCDCSQTDYQGKDCSEED NHVEGLAHLMMGDQGKSKGRREGEGWLRRSLLSIPGKEDYVATFKGSEFFCYDLSLNPIQ SSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKF NDNDWHDVKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPST ADLPGSPVSNNFMGCLKEVVYKNNDVRLELSRMAKQGDAKMKVHGIVAFKCENVATLDPI TFETPGSFITLNKWNAKKTGSISFDFRTTEPNGLLLFSHGKPKQAPKDSKSPLTLKVDFF AIEMLDGHLYLLLDMGSGTTKTRAINKKVNDGEWYHVDFQRDGRSGTISINTQRQAYTAP GESEILDLDDNLYLGGLPENKLGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDVRRMAE VQKATGVKPSCSKEPPKQCLSNPCQNNGVCREGWNRYVCDCSGTGYLGRSCERDATILSY DGSKFMKIQLPVVMHTEAEDVSLRFRSQRAYGVLMATTSRDSADTLRLELETGRVRLTVN LDCIKINCTTSKGPETIFAGQNLNDNEWHTVRVFRRGKSLKLTVDDLQPVEGQMAGDHTQ LEFHNIETGIVTEKRFMSMVPSNFIGHLQSLSFNGMAYIDLCKNGDIDYCELNAMIGFKN IIADPVTFKSRSSYLALTTLQAYYSMHLFFQFKTTSSDGLILFNSGDGNDFIVVELVKGY LHYVSDLGNGAHLIKGNSNKPLNDNHWHNVMISRDTNNLHTVKIDTKITTQTTMGAKNLD LKGDLYIGGVAKETYKELPKLVHAKEGFQGCLASVDLNGRLPDLMSDALACVGQIERGCE GPSTTCQEDSCANQGVCLQQWEGFSCDCSMTSFGGPLCNDAGTTYIFGRDGGLITYTWPP NDRPSTRADRLAIGFSTQLKDAVLVRVDSSSGLGDYLKLHIEKGNIAVIFNVGTDDINIE ETAKFVNDGKYHIVKFTRSGGNATLQVDDLPVIERYPTGNNDNERLAIARQRIPYRLGRV VDEWLLDKGRQLTIFNSQTTIQIGGWDRDRSRPFQGQLSGLYYNGLKVFNMATEGDRNIR IQGSVRLVGESPSSITPQSSANTANRSETSTSIMEITTTTASSRRVKQTTPREPQQTTDD LLVASAECPSDDEDIDPCEPSSGGLANPTGPAVKGYPGPSEGVFRESSSTTGMVVGIIAA AALCILILLYAMYKYRNRDEGSYHVDESRNYISNTSQSNGAVVKEKPPNAAKTSSKSKKN KDKEYYV NT seq 4524 nt NT seq  +upstreamnt  +downstreamnt atggttcttgcaatgcggcatggcgcccatctaatatgggtaggccttctcttgtgctgt atggtagacatgggggcaactatggagtttacaggcgcagagggccagtgggccaggttt ccaatgtggaatgcatgttgtgagagtgaaatgagcttcaacatgaaaactaagagttcc cacgggctgttagtgtacttcgatgacgagggattctgcgactttttagaactcctaata cacaacggtaaactcagtcttcgattctccatcttctgcgctgagcccgcaacggttcta accaacacagcggtcaatgacagccagtggcatgctgtgacaatatggagaaactttaaa aacacaacgctaatggtcgacaatgaagtgaagtgggtcgaagtgaagtcgaaaagaagg gatatgactgtcttcagccacttgtttcttgggggaataccaccggaattacgatctgtg gctttaaggttaacatcagctgtggtcaaggaccatgtaccttttaccggatggataacg gacataaaggtcaacaatacggaatcggcgcttttaaacagcgctggggtcattaacgac ctctgtggtgcagcagccaacatgtgtttaaatggaggggtctgcaatgtcattaacgat gaacccacgtgcgactgctcgcagactgactaccagggcaaagactgcagcgaagaagac aaccatgttgaaggtctggcgcacttgatgatgggcgaccaaggtaaaagtaaagggcga agggaaggagaaggttggcttcgaaggtccctactgagcattccaggaaaagaagactat gtggcgaccttcaagggatctgagttcttctgctacgacttgtccttgaacccgatccag agcagcagcgacgagatcaccctgtccttcaagacgttacagaggaacggtctgatgctt cacacggggaagtctgcagactacgtcaacctggccctgaaaaacggagctgtatcgctg gtcattaatttggggtctggggcctttgaagctctggtggagcctgtcaatgggaaattc aatgacaatgattggcatgatgtcaaagttacaaggaatctacgtcagcactcaggcatt ggacacgctatggtaactatatccgtggatgggatactgaccaccacagggtatactcaa gaagactacaccatgctaggctccgacgactttttctatgttggcgggagtcctagcacg gctgacctgcctggatcacctgttagcaacaactttatgggttgcctgaaagaggttgtg tataaaaacaacgacgtgcgactcgagctctccaggatggccaaacaaggtgatgccaaa atgaaggttcacggcattgtggcttttaaatgcgagaacgtggcgacccttgaccccatc accttcgagacccctgggtccttcatcacgctcaacaagtggaacgcaaagaagacgggc tccatctccttcgacttccgtaccacagagcctaacgggcttctcctctttagccacgga aagcccaaacaggctcccaaggattccaagagccccctgacactgaaggtggacttcttt gccatcgagatgctggatggccacttgtatctattgctggacatggggtcagggaccacc aagaccagagccatcaacaagaaggtcaacgatggggagtggtaccatgtagacttccaa cgggacggacgatcaggtaccatctccatcaacacccagcgccaggcctacacggcccca ggagagagtgagatcctggacctggatgataacctgtacctgggaggactaccagagaat aaactaggcctggtcttccccacagaagtgtggacggctctcctgaactatggctacgtg ggctgtatccgggacctgttcatcgatggccagagtaaagatgtccgccgcatggccgag gttcagaaggctaccggagtcaaaccatcctgctctaaagagccgcccaagcagtgcctg tcaaacccctgtcagaataacggtgtctgccgggagggatggaaccgttacgtctgtgac tgctcagggacgggatacctgggacgctcctgtgagagggatgcgaccatcctgagttat gacggcagtaagttcatgaagatccagttgccggtggtgatgcacacagaagcggaagac gtgtcgctacggttccgttctcaacgggcatatggtgtgctgatggccacaacgtcacgt gacagcgccgacacgctgcgcctggagctggagactggccgtgtccgcctgacggtcaac ctagactgtatcaagattaactgtactaccagcaagggtccagagaccatatttgctggt cagaacctgaatgataacgagtggcacacggtacgtgtgttcaggaggggaaagagtttg aaactcaccgtagatgatcttcaacctgtagaaggtcaaatggcaggtgaccacacccag ttggagtttcacaacattgagacgggtatcgtgacggagaaacgattcatgtccatggtg ccttccaacttcataggccacctccagagcctctccttcaacggcatggcctatatagac ctgtgtaagaacggtgacattgactactgcgagctcaacgccatgatcggcttcaagaac atcattgctgatccggtcacgttcaagtcacggtcgagctatttggctctgaccaccctg caggcctactactctatgcacctgttcttccagttcaagaccacctcatcagatggactc atactgttcaacagcggggatggaaacgacttcattgtggtcgagctggtcaagggctat ctgcactacgtatcagacctggggaacggagctcacctgatcaagggcaactccaacaag cccctgaatgacaaccactggcacaacgtcatgatctcacgagacactaacaacctccac accgtcaagatcgacaccaagatcaccacccagaccaccatgggagccaagaacctggac ctgaagggtgacctgtatattggtggcgtggccaaagagacgtacaaggagcttcccaag ttggtacacgccaaggagggcttccagggttgcctagcatcggtggacctgaacggacgc ctcccagacctgatgtcggacgccctggcatgtgtgggccagatagagagaggctgcgaa ggccccagtacaacgtgccaggaggactcgtgtgcaaaccagggtgtgtgtctgcagcag tgggaggggttcagctgtgattgtagcatgacttctttcggagggccactctgcaacgac gctggaactacgtatatatttgggcgtgacggcggtctgatcacgtatacatggcctccc aatgacaggcccagcacgcgggcagacaggctggccataggcttcagcacacagctgaaa gatgctgttctggtgagggtggacagctcctctggccttggagactacctgaagctacac attgaaaaaggaaacattgcagttatatttaatgtcggaacggacgacataaatatcgag gagacagcaaagtttgtaaatgatggaaagtaccatatagtgaagtttacgcggagtggc ggtaacgccacactacaggtggatgacctacctgtcatagagcgctatcccacaggcaac aatgataacgaacgcctggcgattgctagacagcgaatcccatatcgacttggtcgagta gttgacgaatggctactcgacaaaggtcggcagctcactatcttcaacagccagaccacc atacagataggtggctgggaccgggacaggagtcgcccgtttcagggccagctctcaggc ctctactataacgggctgaaggtgttcaacatggccacagaaggagatcgtaacatccgc atccagggcagcgtcaggctggtgggggagtcgccctcgtccatcacgccacagtcgagt gccaacacagccaaccggtcggagacgtccacatccattatggagatcaccacgacgaca gcgtccagtaggagggtgaagcagacgacgccacgggaacctcaacagacgacggatgat ctgctggtggcatctgctgagtgtccgagcgatgacgaggacattgatccctgtgagccg agctcaggtgggttagctaacccaacaggtccggcggtgaagggctaccctggtccatcg gagggggtgttccgtgagtcaagcagtaccacggggatggtggttggaatcatagcggca gctgccctctgtatcctcatcctgctctatgccatgtacaaataccgcaaccgggacgag ggttcttaccatgtagacgagagccgtaactacatcagtaacacatcgcagtccaacggg gcggtggtgaaggagaaaccgccaaacgccgccaagacttcctctaagagcaagaagaat aaagacaaggagtactatgtgtga

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