Oncorhynchus nerka (sockeye salmon): 115144422
Help
Entry
115144422 CDS
T07952
Name
(RefSeq) chitin synthase chs-2-like isoform X1
KO
K00698
chitin synthase [EC:
2.4.1.16
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00520
Amino sugar and nucleotide sugar metabolism
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
115144422
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
one01003
]
115144422
Enzymes [BR:
one01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.16 chitin synthase
115144422
Glycosyltransferases [BR:
one01003
]
Polysaccharide
Structural polysaccharide
115144422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chitin_synth_2
Glyco_trans_2_3
Glyco_tranf_2_3
EST1
Motif
Other DBs
NCBI-GeneID:
115144422
NCBI-ProteinID:
XP_029541323
LinkDB
All DBs
Position
LG16:complement(30483377..30500234)
Genome browser
AA seq
1439 aa
AA seq
DB search
MEELKFRGRKREGRHRDTWDPFQLNPIGAEKEEKRRCFELFQHLVAAFVGIMVLSSAVIS
KGSLLVLSTLSSPTSTRTSKERQYYMLMLVGCLVMPNLLVFLKSLWKCAFKNFVPPNMRT
MGIVCGIECLVSLGTSILVLVVMPQFDVLTNLFISGGVCMLSSVLQIVFRLQRENWKIIF
PICSLMLVLTGYFLLGADYYVRVTSFVSGQEDDCYWYVGIAVFASFLVSLNWWENPVQAS
NNMQEMLAELDTFRDFVFVISSLLRVVVIAAVYLIYHVLIQENIVWSDFDFTPKADEDES
TIARHRETLDIGLTVLFLQAFFSAACHWFGVVACKIHSVRMSFAFPVCFTGPAVLILGMI
LFLTQSQYLAGADTTSIIDFCSSLVDLSTKNTSAVVMLELTKSICRTSLSSHYWTWPFSL
LALEGICMWLGLITCTYYVWNFKVQRIERTTELFVRRLYESAFIDLSLLLNTKMKVVQTR
NQESSVVDDVENCVIYLCATMWHETYDEMLKILTSMFRLDRYRGDPKEEHKDVFDFECHI
FVDDAFMIDKETDKKFINEYVTDLIHVVIEVYRVFTNKEPDDVSIIETPYGGRLMFVMPE
GNMLYFHLKDKQLIRNKKRWSQIMYLYYLLGWKGYNVKNPQKITRQNNPCRASLISLDGE
SFLLPQHDNDSKRKHISDDNTYIMALDGDTDFHPAALILLVDRLRKYCNVGAACGRIHPT
GMGPMVWYQKFEYAVGHWLQKTAEHVFGSVLCSPGCFSLFRGSALMDDNVLKRYTTTATR
ASEYVQYDQGEDRWLCTLLLQQGWRVEYNAASDAYTNSPQEFKEFYNQRRRWGPSTLANT
LDLLHSGNETVKRNSSISRLYIFYQIFTVSSSILGPASVSLMIAGAFQFVFKIEGTLSII
ISVIPPIFYLLICFLAKPNTQITIAAIMSVLYAFLMLASFFAIIGDMAMQGTFITPTGLF
LVSMAAMYLVTAILHPQEFSMIIYGLMYFICIPSGYLLLTIYSLVNMHIVTWGTRETNKE
KEQKKTQNVLCDRNCKLCCWDMKLQVTQETDNLMLQQLQQAVNPNIQVTQRVVHEQTPNT
KEEKNNAPNEENSEEISPELLDRKRAKKDLEYDTSSVDRFDSIPKKESAYSSIEDDNDDN
HDDEDDNMLYDGSLYSGFTEEEREFVPQSDWVQPVKEEFLKKLTYANLKRNLQEQIRYTL
RNKNQEDVCEELVMMLTDTVNGELKDKVGPEDVLSDSQLEELQYALNEAARRILKTNRME
RLERRVKRAVEKTLIAPQVEKLTEDEHDFWKKLLERYLAPIVDDKAHKEEVTRELKSLRN
KAVFLYFIVNVLWIVATFFLQAIGNDVISIKIQKVWPNGTSSGEYLKVEPLSLMFLLSFA
VLLVVQFLAMLYHRVYTLIHVVSYRSTEKDYVPKDEEDEEGMILENQIANGLVITSDDL
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctcaaattcagagggaggaaaagggaaggaaggcacagagacacctgggat
ccattccagttaaatcccattggtgctgagaaagaggagaagagaagatgctttgagttg
ttccagcacctggtggcagcgttcgtggggataatggtcctgtccagtgctgtcatcagc
aagggctctctactggttctctccacactctcaagccccacatcgactaggacttccaag
gaaagacaatattacatgctcatgctggtgggctgtttggtgatgcccaacctgctcgtg
ttcctcaagtcactgtggaaatgtgctttcaagaacttcgtcccaccaaacatgagaact
atgggaattgtgtgtgggattgaatgcttggtgtctcttgggacctccatcctggtgctg
gtggtgatgccccagtttgacgtgctgacaaacctctttatctccgggggagtctgcatg
ctttcctcagtcctacagattgtatttcgtctgcagagagagaactggaagatcatcttc
cccatttgttctcttatgcttgtcctgaccggctactttctccttggggcagactattac
gtccgggtaacctcttttgtatcaggccaggaggacgactgttattggtatgttggcatt
gcagtttttgcatcttttttggtttctctgaactggtgggaaaacccagtgcaggcgagc
aacaacatgcaagaaatgctggctgagttggacaccttcagagactttgtatttgtgata
tcgagtcttctaagggttgtagtcattgctgctgtgtacctcatctaccacgtattgata
caggaaaatattgtatggtcagattttgatttcacccctaaggccgatgaagatgaaagt
acaattgcgaggcatagagagacacttgatattggtcttactgtacttttccttcaagcc
tttttctctgctgcatgccattggtttggagtggtggcttgtaagatccactctgtgcga
atgagcttcgccttccctgtctgttttaccgggcccgctgttctcattctcggcatgatc
cttttcctaacgcaatctcaatacctagctggggccgacacaacctctatcatagacttt
tgctcgagcctagttgacctgagcaccaagaacaccagcgcagtcgtgatgctggagctc
acaaagagcatctgcaggacttctttgagtagccattactggacctggcctttctcccta
cttgcgctggagggcatttgcatgtggctcgggctcatcacatgcacctactacgtgtgg
aacttcaaggtccagaggatcgaacgcacaactgagctgtttgtacgacgcctctatgaa
tctgccttcatcgacctgtctctgcttctgaacaccaagatgaaagttgtgcaaacgagg
aaccaggagagtagtgttgttgacgacgtggagaattgtgtcatttacctctgtgcaaca
atgtggcatgagacctatgacgagatgttgaagatcctcacatccatgttcaggttggac
cggtacagaggtgacccaaaagaggaacataaagatgtttttgactttgaatgccacata
tttgtagatgacgcattcatgatagacaaagagacggacaaaaagtttatcaacgaatat
gtgaccgatctcattcatgtggtcatagaggtttacagggtattcaccaataaggagcct
gatgatgtgtcaattattgagactccttatggtgggcgattaatgtttgtgatgccagaa
ggaaacatgctgtatttccatttgaaagacaaacagctcatcagaaacaagaagagatgg
tcacagatcatgtacctctactatctgcttggatggaaaggatacaatgtcaagaatcct
caaaagataacgagacagaataatccttgccgtgccagtctcatatcactggatggggag
agtttcctgttgccacagcatgacaatgacagtaagagaaaacacatctctgatgacaat
acctacatcatggccctggatggagacacagacttccaccccgcagctctgatattactg
gtggaccgacttcggaagtactgcaatgtgggtgctgcatgcggacgaatccaccctaca
ggaatgggtccaatggtgtggtatcagaaatttgagtatgctgttggtcactggctccag
aaaacagctgagcacgtgtttggttcagtcctctgcagtcctggatgcttcagcttgttc
aggggatcagctctgatggatgacaacgtgctcaagagatacactaccactgcaactaga
gcctctgagtatgttcaatatgatcaaggtgaggaccgctggctgtgcaccctgctcctc
cagcagggctggagagtggagtacaacgctgcgtctgacgcctacaccaactcccctcag
gagttcaaagagttttacaaccagaggcggcgctgggggccgtctactctggccaacacc
ctggacctcctgcacagtggcaatgagacggtcaagaggaactcttccatctccagacta
tacatcttctaccagatatttactgtcagctcctccattctcggccctgcctctgtgtct
ctgatgatagcaggtgcttttcagtttgtgttcaaaattgagggaaccctgtccatcatc
atatcagtcatcccaccaattttctacctgttaatttgttttttggcaaaaccaaatacc
cagatcaccattgcagctattatgagcgtgttgtacgcctttctgatgttagcatcattc
ttcgccatcatcggtgacatggctatgcagggcacattcatcaccccaactggcctcttc
ctggtttccatggctgccatgtacctggtgacagccatccttcacccccaggagttcagc
atgatcatctatggtctgatgtacttcatctgtatccccagtggctatctcttgctcaca
atctactccttggtgaacatgcacattgtcacatggggcactcgagagacaaacaaggaa
aaagaacagaagaagacccagaatgttctctgtgatcgaaactgcaaactttgctgttgg
gatatgaaactacaagtcacccaagagactgataacttgatgctccagcaactccagcag
gcagtcaatccaaacatacaagtcacccagcgagtggtgcatgaacagacgcccaacacc
aaggaagagaaaaacaatgccccaaatgaagaaaacagtgaggaaataagtccagagctt
ttagaccgcaaaagagccaagaaagacttagaatatgatacaagcagtgttgacaggttt
gacagcattcctaaaaaggagagcgcctattccagcattgaagatgacaacgatgataac
catgacgatgaagatgataatatgctttatgacgggtcgctttatagtggcttcaccgag
gaagaaagagaatttgtacctcaaagtgattgggttcagcctgtcaaggaagagttcctg
aagaaattgacctacgccaacttgaaaaggaaccttcaggagcagatccgttacaccctg
agaaacaagaaccaggaggatgtgtgtgaggagctggtgatgatgctgacggacacggtg
aacggagagctgaaggacaaagtgggcccagaggacgtgctgagcgacagccagctagaa
gagctgcagtacgcccttaacgaggctgccaggaggatcctgaaaaccaaccgaatggag
aggcttgagaggagggtaaaaagagctgtagagaaaaccctcattgccccacaggtggag
aaactcactgaggatgaacacgacttttggaagaaactgcttgagagatacctcgcacct
attgttgatgataaagctcataaagaggaggtgacaagggaactgaagtcactacgaaac
aaggcagtgtttctgtatttcatcgtcaacgttttgtggattgtggccactttcttttta
caagccattggaaatgatgtgattagtatcaagattcagaaagtctggccaaatggcaca
tcctcaggagaatacctgaaggtggagcctctcagtctgatgttcctcttgtcattcgct
gtgcttctagtggtgcagttcctggctatgctttaccacagagtttatactcttatccac
gtggtgtcgtacagaagcacagaaaaagactacgttcccaaagacgaggaggacgaggag
gggatgattcttgagaaccagatagccaacggccttgtgatcaccagtgatgacttgtga
DBGET
integrated database retrieval system
