Oncorhynchus nerka (sockeye salmon): 115144444
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Entry
115144444 CDS
T07952
Name
(RefSeq) serine/arginine-rich splicing factor 2-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03040
Spliceosome
one05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115144444
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115144444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115144444
Spliceosome [BR:
one03041
]
Common components
Common spliceosomal components
SR proteins
115144444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBD_AKAP-17A
RRM_PARP14_3
RRM_3
RRM_8
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
115144444
NCBI-ProteinID:
XP_029541357
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All DBs
Position
LG16:complement(31072524..31077336)
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AA seq
211 aa
AA seq
DB search
MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV
RFHDNRDAEDAMDAMDGALLDGRELRVQMARYGRPPDSHFGRRGGGGPPRRHGGYGRRSR
SRSASPRRRRRSRSRSRSRSRGRDYSRSRSRSDSRSRSKSRTPRKSKSPSRSRSRGASRS
RSRSPASNRGSKSRSRSKSRPKSAEDNGTDS
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgagctacggaaggccgccgcccgatgtcgagggtatgacctcgctcaaagtggacaat
ctcacctaccgaacttctcctgagacactacgacgagttttcgagaagtacggccgggtg
ggagacgtgtacatcccccgcgatcggtacaccaaggagagccgcgggttcgctttcgtg
cggttccacgataaccgcgacgctgaagacgcgatggacgccatggacggggccttgctt
gacgggcgggaactgcgagtccagatggcgcgctatggccgtccaccagactctcacttc
gggcgccgaggcggcggtggacctccaaggaggcacggaggctatggtcgcaggagcagg
agtcgttcggccagccctcgtcggcgcagacgcagtcgttcccggagcaggagccgctcc
cgtggccgtgactacagccgctcccggtctcgttccgactctagatcccgttccaagtcc
cgcaccccccgcaagagcaagtccccatctcgatcgaggtcccgtggtgcttccaggtcc
cgctcccgcagcccggcttccaacagaggctccaaatccaggtcgcggtccaagagcagg
cccaagtccgccgaggacaacggaaccgactcttag
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