Oncorhynchus nerka (sockeye salmon): 115144470
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Entry
115144470 CDS
T07952
Name
(RefSeq) sorting nexin-5-like
KO
K17920
sorting nexin-5/6/32
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115144470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115144470
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115144470
Membrane trafficking [BR:
one04131
]
Endocytosis
Macropinocytosis
Sorting nexins
115144470
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
115144470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
Motif
Other DBs
NCBI-GeneID:
115144470
NCBI-ProteinID:
XP_029541392
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All DBs
Position
LG16:complement(32867606..32889999)
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AA seq
399 aa
AA seq
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MTSTIDDSDKEKALSVSVDLNNDTSLLIDIPDALCERDKVKFTVHTKTTLSSFQKPDFSV
PRQHEDFIWLHDALVETEDYAGLIIPPAPPKPDFESAREKMHKLGEGEATMTKEEYTKMK
QELEAEYLAVFKKTVQVHEVFLQRLSSHPILSKDRNFQIFLEYDQDLSVRRKNAKETFGS
FFKNMVKSADEVIISGIKEVDDFFEQEKTFLLDYSSKIKDSTARAEKMTRSHKNVADDYI
HISSTLNSFSVDDNTALKKHFEKLSDLFEKLRKVEGRVASDQELKLTELLRYYMRDIQAA
KDLLYRRARTQADYENSNKALDKARLKSKAVAAAEDQQQQCLQRFNKLSESGKRELTSFK
GRRVVAFRKNLIEMAELEIKHAKNNMSLLQDCIELFKSS
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctaccattgatgatagtgacaaagaaaaggccctctctgtgtctgtggaccta
aacaacgacacctctctactcatcgacattcctgatgcactctgcgaacgagacaaagtc
aagttcactgtccacaccaagaccaccctgagctcctttcagaagccagacttctctgtt
cctaggcaacatgaggactttatctggctccatgacgctctggttgaaactgaagactac
gctgggctcatcatccctccagcgcccccgaagccagactttgagagcgccagggagaag
atgcataaactgggcgagggagaagccaccatgaccaaggaggaatacaccaagatgaaa
caggagttagaggctgagtacctggctgttttcaagaagactgttcaagtccacgaagta
tttctgcagcgtctatcttctcaccccatcctgagcaaggacagaaacttccagatattc
ctggagtatgaccaggatctgagcgtacggaggaaaaatgccaaggagacgtttgggagt
ttctttaagaacatggtgaagagtgctgatgaggtcatcatctcagggataaaggaagta
gatgatttctttgagcaggagaagaccttcctgcttgattattcgtccaagatcaaagac
tccactgccagggcggagaagatgacccgctcccacaaaaatgttgctgatgattacatc
cacatctcttctactttgaacagtttctctgtcgatgacaacacagcacttaaaaagcac
tttgagaagttatctgacctgtttgagaaactccggaaagtggagggtagagtggcgtcg
gaccaggagctgaagctcacagagctgctacgctactacatgagggacatccaggcagcc
aaggacctgttgtacagacgggccaggacccaggcagactatgagaacagtaacaaggct
ctggataaggcccggctgaagagtaaagctgttgctgcagcggaggaccaacaacaacag
tgtctgcagaggtttaacaagctttctgagtcggggaaaagagagctgaccagttttaag
ggcaggagagtggtggctttccggaagaatctaatagagatggctgagctggagattaag
catgctaagaacaacatgtctctgctgcaggactgcattgagcttttcaagagcagctga
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