KEGG   Oncorhynchus nerka (sockeye salmon): 115144582
Entry
115144582         CDS       T07952                                 
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC5-like isoform X1
  KO
K14721  DNA-directed RNA polymerase III subunit RPC5
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03020  RNA polymerase
one04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    115144582
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    115144582
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:one03021]
    115144582
Transcription machinery [BR:one03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Pol III specific subunits
     115144582
SSDB
Motif
Pfam: RPC5 RPC5_C
Other DBs
NCBI-GeneID: 115144582
NCBI-ProteinID: XP_029541489
LinkDB
Position
LG16:complement(17528873..17543393)
AA seq 702 aa
MASEEDDDPIIQEIDVYLAKSLADKLYLFQYPVRPSSMTYDDVTHLSAKIKPKQQKVELE
MAINTLSPNYCRSKGEQIALNVDGTTSEDSNTYSVKMMDKQTFTSIQSTTNTSRYAAAVF
RKGELHITPLQGILQMRPSFSYLDKADGKHREREAANEGGDSSQDEVEEDVKAVTVRFSR
PESDQARQRRIQSYDFLQKKQAEEPWVYLHYHGLNDGRSDHERQYLYCQAMGGSENTELV
KTPKEYLAMLMPPITEEKIVRPVGPSNVLSMAQLRTLPLGDQVKTLLKNVKVIPFANLMG
LLTPGTDSTAVLRCIQQVALLVQGNWVVKSDVLYPKNSCSPHSGVPAEVLCRGRDFVMWR
FTQERSVMRKEVTAIIKLLPEDVKDFLEHMAMPRINRGWEFLLPSDSDFIKKHPDVAQRQ
HMLWIGIQSKLEKVFNFSKEDVVSKKDPQTEAIHVSGEQRLKAAHERARQNQPSLQKDLS
ARRQGKGGAGPSGGAGVRVKEEPVSDGEDEPMDTSSSSSALPNGLVNGYPSAATSAALNP
HNGHGGTPTPSPSPELRDFVWNLFRKQHVLTLSEVKRLFNLHLASLPPGDSLFHSISDRL
LQDTILMSHCKQILVPFPAQSTAAADEQKVFAVWETGETFDKHRQVLYEIFMKNYRVRRN
VIQTRLTQEMGDQVTKDDVDRLLKECCVSFGGMWYLKGTLQS
NT seq 2109 nt   +upstreamnt  +downstreamnt
atggccagtgaggaggacgatgaccccatcatacaagagattgatgtatacctagctaaa
agccttgcggacaagctatatctgttccagtatccagtacgcccttcctctatgacctat
gatgatgtcactcatctatctgccaagatcaagcccaagcagcagaaggtggagttggag
atggccattaacactctgagtcctaactactgtcgaagtaaaggagagcagatcgccctc
aacgtggacggaaccacctcagaggactccaacacctactctgtgaagatgatggacaaa
cagacgttcacatccatccagtccacaaccaacacctccagatacgctgctgctgtcttc
aggaaaggggagctccacatcacaccgctgcagggtatccttcagatgcgacccagcttc
tcctatctggataaggctgacggcaaacacagagagcgggaggccgctaacgaaggggga
gactcttctcaggatgaggtggaggaagacgtcaaggccgtcactgtgaggttttcccgt
cctgagtcggaccaggctcgtcagcggcgtatccagtcgtacgacttccttcagaaaaaa
caggcagaggagccctgggtctacctgcactaccacggcctcaacgatggccgttcggac
cacgagaggcaatacctgtactgccaggccatgggaggctctgagaacacagaactggta
aaaacaccaaaggagtacctggcaatgctcatgccccctatcacagaggagaagattgtg
aggcccgtaggtcccagtaacgtgctgtccatggcccagctccggaccctgccgctaggt
gaccaggtcaaaaccctgttgaagaacgtcaaagtgataccgtttgccaacctgatgggt
ttgttgacccctgggacagactccactgcggtgctgcgctgcatccagcaggtggcgcta
ctggtgcagggcaactgggtggtcaagagtgacgtgctgtatcctaagaacagctgtagt
ccccacagtggtgtgcctgctgaggtgctgtgtcgaggaagagactttgtgatgtggaga
ttcactcaggagcgctcagtgatgaggaaggaggtcacagccatcatcaagctcctaccg
gaggatgtgaaggacttcttggaacacatggcgatgcctcgtataaaccgtggctgggag
ttcctgttgccaagcgacagtgacttcatcaaaaagcaccctgacgtggcccagcggcag
cacatgctgtggattgggatacagagcaaattggagaaggtcttcaacttctctaaggag
gacgtggtatccaaaaaggacccacaaacagaagctatacacgtgagtggcgagcagcgt
ctgaaggcagcccatgagcgtgcacgacagaaccagccctctcttcagaaggacctgagc
gctcgtcgacagggaaagggtggagccggaccgagcggtggagccggggtcagagtcaaa
gaggaacctgtcagcgacggtgaagacgaacccatggacacatcctcttcctcctccgct
ctccctaacgggttggtaaacggttacccatctgccgccacttccgctgccttgaatcct
cataacgggcacggcgggactcccacgccctcaccgtcacctgagctgagggactttgtg
tggaacttgttcaggaagcagcatgtactgacgctgagcgaagtcaagaggctgttcaac
ctccacctggcctccctgcctcccggagacagcctgttccactccatctcagaccgcctg
ctacaggatactatactgatgagccactgcaaacagatactggtgccttttccagcccag
agcacagcagctgctgatgagcagaaggtgtttgctgtgtgggagacaggagagaccttc
gacaagcatcgtcaggtcctgtatgagatcttcatgaagaactaccgggtgaggaggaac
gtgatccagaccaggctgacgcaggagatgggagaccaggttaccaaggatgatgtggac
cgcctgcttaaggagtgctgtgtgagctttggagggatgtggtacctcaagggtacccta
cagtcctga

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