Oncorhynchus nerka (sockeye salmon): 115144688
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Entry
115144688 CDS
T07952
Symbol
fan1
Name
(RefSeq) fanconi-associated nuclease 1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
115144688 (fan1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
one03400
]
115144688 (fan1)
Enzymes [BR:
one01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
115144688 (fan1)
DNA repair and recombination proteins [BR:
one03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
115144688 (fan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAN1_TPR
VRR_NUC
Fan1_SAP
FAN1_HTH
BsuBI_PstI_RE
MFS_3
DUF913
Motif
Other DBs
NCBI-GeneID:
115144688
NCBI-ProteinID:
XP_029541566
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All DBs
Position
LG17:complement(685814..704313)
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AA seq
793 aa
AA seq
DB search
MAPRPLSYAPSRLNKRKKGGKAEVSVKTQRMSTRSKKARFEKRDGEEPDDDLTINKLLTS
TTTTADDDKQHGTAESSTGNCDTLLKSSTEVPEEERQRRKVKLEEEGEQEEQEESPVTGS
SDQLTEPDTDRGTDEQDSESPRLPYYLGNFLTVLEAVLENEDDRMLFNQEDLSAIHGFER
LSVTGQKLYVRLFQRKLKWLQVNKLNYNEISTDLGPVAQELVEGGFLQTDSDLQELGEVL
DLLPAPELRSLAKTFHLGGPGSGTQKHQLVEGLLKLSRQRSLFALAPGQNNIGTVILKRA
KQLAGSCVRLHRGPRAVFSRVLLLFSLTDGLEEEETAGGGQGQLYTILLVNSGRLAFPDY
TVQRRAKLFLDREDLIRYEAAMRALQEVITAMQTGHWEDALGLYTAAKMTWQETSKTYDL
SHQEELPVFLRCFTTGWAYTRILSRGVEVLQRLRCYKEAVKELRSLLSQSVYCPDSRGRW
WDRLALNLQQHLKLPEQAISSIRDGLSDPLVRTGHQLSLHQRANRMKESPSYKNYHLVLS
DLPTIHVNDVTHVTIRGQLFPHEGGTGKNVFLMPAEEGAEGGYSTVMCSVEELSLAHYRR
QGFDQGIHGEGSTFSTLFGLLLWDVIFMEGIPDVFRNPYQPCPLDLFTDCFYGNRREAIE
TRVQVLCEASIETLHNLMAEAWTNQEGKVCSLVNWERFSSLQRAQSLVSCLGGSFLGGMI
TRMAKDYRHCRAGLPDLVVWNTSNNTYKLVEVKGPSDKLSQKQQIWLDELQRLGADVEVC
HVTATGARGAWLE
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggccccgcgacctctgtcctatgctccatccagactgaacaagaggaagaaaggaggg
aaagcggaggtctctgttaaaacacagaggatgtctactcgcagcaagaaagccagattt
gagaagagagatggtgaagaaccagatgatgacctcactataaacaaactccttacgtca
acaacaacaacagctgatgatgataagcagcacggaacagcagaatcttcaactggtaac
tgtgacactcttttgaagagcagcacagaggtgcccgaggaggagcgtcagagaagaaaa
gtaaaactagaggaagaaggagaacaagaagaacaagaagaatccccagtgaccggtagc
agtgatcagctgacagagcctgacacagacagaggaactgatgagcaagattccgagtca
ccgcggttaccgtactacctgggtaacttcctgaccgtgctagaggcagtgctggagaat
gaagacgataggatgctgttcaatcaagaagacctttcagccatacacggctttgagcgt
ctgtcagtgacaggacagaagctgtatgtgagactgttccagaggaaactgaagtggctc
caggtcaacaagctaaactataatgagattagcactgacctgggacctgtagctcaggag
ctggtggaaggaggtttcctacagacagacagtgacctccaggagcttggggaggtgctg
gacctgctgcccgccccggagcttcgtagcctggctaagacgttccacctggggggccct
gggtctggtacccagaaacatcagctggtggagggactcctgaagctgagcagacagagg
tctctgttcgccctggcccctggacagaacaacattgggactgtcatactaaagagggcg
aagcagctagctggttcctgtgtacgtctgcatcgcggccccagggctgtgttctctcgc
gtcctcctcctcttctccctgacagacggtctggaggaggaggagacggccggagggggt
cagggtcagctctacaccatcctactggtcaactctggccgactggccttccctgactac
accgtacagcgcagagccaaactgttcctggatagagaagatcttatcaggtacgaggcg
gcgatgcgagcgctgcaagaggtgatcacagccatgcagacaggccactgggaggacgct
ctgggactttacactgcagccaagatgacctggcaggagacgagcaagacgtacgacctc
agccaccaggaagagctgccagtgttcctgcgctgtttcaccacagggtgggcctacaca
cgcatcctgtccaggggagtagaagtactgcagagattacgttgctacaaggaagcggtg
aaggagctgcgctcactattgtcccagtcagtctactgtccagacagcagggggcgatgg
tgggacagactggcactcaatctccagcagcacctcaaactacctgaacaggctatcagc
tccatcagagacggtctctctgaccccttggtgaggacgggccaccagctttcactccac
cagagagccaataggatgaaggaatcccctagctacaagaattaccaccttgtactcagt
gacctgcccaccatccacgtcaacgatgtcactcatgtcactatccgagggcagctcttc
ccccacgagggggggacagggaagaatgtgttcctcatgcctgctgaggaaggggcagag
ggaggatactccactgtcatgtgttctgtggaagagctgtcactggcacactaccgtcgg
caaggctttgaccaagggatccatggagagggctccacgttttccactctgtttggtctt
ctgttatgggacgtcattttcatggaggggattccagacgtcttccggaacccctaccag
ccctgcccactggacctcttcacagactgtttctatgggaaccggagggaggcgatagag
acgcgtgtgcaggtgctctgtgaggcgtccattgagacgctgcacaacctaatggctgag
gcctggaccaatcaggaggggaaggtgtgttcactggtcaactgggagcgcttctcatcc
ctgcagcgggcacagagtctagtgtcttgtctgggtggatcgtttctgggagggatgatc
actaggatggccaaggactacagacactgtcgagcaggactgcctgacctagtggtgtgg
aacacatccaacaacacctacaagctggtggaggtgaagggccctagcgacaaactgtcc
cagaagcaacagatctggttggatgagctacagagactgggggctgatgtagaggtttgt
cacgtcactgccaccggggccagaggagcttggctggaatag
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