Oncorhynchus nerka (sockeye salmon): 115144747
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Entry
115144747 CDS
T07952
Name
(RefSeq) receptor-type tyrosine-protein phosphatase T-like
KO
K13297
receptor-type tyrosine-protein phosphatase T [EC:
3.1.3.48
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
one01009
]
115144747
Enzymes [BR:
one01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
115144747
Protein phosphatases and associated proteins [BR:
one01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
115144747
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
DSPc
Tc-R-P
Pur_ac_phosph_N
PTPlike_phytase
Y_phosphatase3
Ig_2
ig
TM_ErbB1
Ig_3
I-set
Motif
Other DBs
NCBI-GeneID:
115144747
NCBI-ProteinID:
XP_029541654
LinkDB
All DBs
Position
LG2:15441009..15858587
Genome browser
AA seq
1468 aa
AA seq
DB search
MDVYIQYRSDHTSAICSCSFEDPYSSCGYSVALGTNGFAWEQVNTWERPTMDAAVPTGSF
MVVNGSGRASGQKAHLLLPTLKENDTHCIDFHYSLSSREGSSPGALNVYIKVNGGAQGNP
VWNASGSVTEGWVKTELAISTFWPNSYQVIFESVSVQGHPGFIAVDEVRVLAHPCRKAPH
FLRLQNVEVNVGQNATFQCTAGGKWSQHDQLWLQQWNGKDTALMVTRVVNHRRFSATVSV
GDTSQRSTSRYRCVIRSDGGSGVSNYAELIVKAPPTPIAPPELLAVGATYLWIKPNANSI
IGDGPIILKEVEYRTTTGNWAETHIVDAPTYKLWHLDPDVEYEIKVLLTRPGEGGTGPPG
PPLITRTKCADPVNGPQNVNVVDIRARQLTLQWETFGYAVTRCHSYNLTVQYQYVFNQQE
FAAEELIQTSSHYTLRGLRPFVTVRLRLVLANPEGSKESEEIVKQTEEDVPGSVPMESTQ
TGPYEEKIFMQWKAPNETNGVITLYEITYKALSSLDPSADLTTQRGRVFKLRNETHHLFV
GLYPGTTYFFTLKASTNKGFGPPVTTRIATKIAAPSMPEYETDTPPLNETDTTITVLLKP
AQSRGAPVSVYQLVVKEERKQKVRRAADAQECFPVPVSFKNASILDSPHYFAAELPPTYL
TVVQPFTVGDNKTYNGYWNPPLSSSKSYSIYFQALSKANGETKINCVRLATKGASTQDSD
AVEPEKQVDSNVKMAGVIAGILMFVIILLGVVLTFKRRRNAYSYSYYLKLAKKQKETANS
STQREMGPVGTADKSTTKVSTLHKDDPFSTSSQDLNGFTSPSPCTFSVQGKTLQSKSLLN
SYYSVSKEAVAVPATASIDSSHSELAQPSLTIQTYPYGGCESVEMSYQAGQFQPAIRVAD
LLQHITQMKCGQGYGFKEEYEGLTEGQAAPWETAKKDENRNKNRYGNIIAYDHTRVRLQL
LDGDPHSDYMNANYIDGYHRPRHYIATQGPMQETVRDFWRMIWQENSGSIVMVTNLVEVG
RVKCVRYWPDETDVYGDIKVTLIETEPLAEYVIRTFTVQKKGHHEIREIRQFHFTSWPDH
GVPCYATGLLGFVRQVKFLNPPDAGPIVAHCSAGAGRTGCFIAVDIMLDMAENEGVVDIF
NCIRELRSQRVNMVQTEEQYVFVHDAILEACLCGNTAIPVCEFRAIYYNIIRLDPQTNSS
QIKDEFQTLNIVTPRVRPEDCSVGLLPRNHDKNRSMDVLSVDRCLPFLISVDGESSNYIN
AALMDSHKQPAAFIVTQHPLPNTAADFWRLVFDYNCSSIVMLNEMDAAQLCMQYWPEKSS
CCYGPVQVEFISADIDEDIINRIFRICNMARPQDGYRLVQHFQFIGWPAYRDTPLSKRSI
LQLVRRLAKWQEQYDGGDGRTVVHCLMGGGRSGTFCAICSISEMIQQQNIVDVFHTVKTL
RNNKSNMVETMEQYKFCYEVALEALSSF
NT seq
4407 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttacattcaataccgcagtgaccacaccagtgccatatgcagctgttcattt
gaagacccctacagcagctgtggctacagtgtggccctcgggaccaatggcttcgcttgg
gagcaagtcaacacttgggagaggcccaccatggacgcagctgttcccacaggttctttt
atggtggtgaacggctccggccgggcatcgggacagaaggcccacctgctcctgcctacc
ctgaaggagaacgacacccactgcatcgacttccactattctctatccagccgcgaaggc
tccagtcccggggcactcaatgtctacattaaggtgaatggcggcgcccagggtaaccct
gtgtggaacgcctccggctcggtgaccgagggttgggtcaagaccgagctggccatcagt
accttctggcccaactcctatcaggtgatattcgagtctgtatccgtacagggccatcca
gggttcatcgcggtggacgaggtccgagtgttggcccacccatgccggaaagcgcctcac
ttcctgcggctgcagaatgtggaggtgaatgtgggccagaacgccaccttccagtgtacc
gccggggggaagtggtcacaacacgaccaactgtggctacagcagtggaatggtaaagac
acagccctcatggtgacgcgggtggtgaaccaccggcgtttctcagccaccgtcagcgtc
ggggacacgtctcagagaagcaccagccgctatcgctgtgtcatccgctccgatggtggc
tctggggtctccaactacgcagagctaatcgtcaaagctccccccacgcccattgcccct
ccggagctcttggcggtgggggccacctacctgtggatcaagcccaacgccaactccatc
atcggggacggacctatcatcctgaaggaggtggagtaccgcaccaccacgggcaactgg
gccgagacccacatcgtggatgcccccacctacaagctttggcatttggaccccgacgtg
gagtacgagatcaaggttctgctgacccggccaggcgagggaggcacggggcccccggga
cctccactcatcacccggaccaagtgtgctgacccagtcaacgggcctcagaatgtcaat
gtggtggacatccgggcccgccagctcaccctgcagtgggagacgtttggctatgccgtg
acgcgctgccacagctacaacctgaccgtgcagtaccagtacgtgttcaaccagcaggag
tttgcggccgaggaactgatccagacgtcgtcccactacaccctgcggggtctgaggccc
tttgtcaccgttcgccttcgcctggtccttgccaatcctgagggcagcaaggagagcgag
gagattgtcaagcagacggaggaggatgttcccggctctgttccaatggagtccacccag
accggaccatacgaggagaagatcttcatgcagtggaaggcacctaacgagaccaatggt
gtcatcacgctatacgagatcacctataaggctctgagctccttggaccccagtgcagac
ctgaccacccagcgcggcagggtgttcaagctacgcaacgagacccatcacctgtttgtg
gggctctacccaggcaccacctacttcttcaccctcaaagccagcaccaacaaaggtttt
ggaccccctgttaccacccgcatcgccaccaagatagcagccccatcgatgccggaatac
gagacagacacgccccctctgaacgagacggacaccaccatcacagttctgctgaagcct
gcccagtccagaggagctcccgtcagtgtctaccagctggtggtgaaagaggaacgcaag
cagaaggtgcggcgggcagccgacgcgcaggagtgcttccccgtccccgtcagcttcaag
aatgcctccatcttggattcgccccactactttgcggcggagctcccgcccacctacctg
actgtggttcagcccttcaccgtaggcgacaacaagacctacaacggctactggaacccc
cccctctcttcgtccaagagctacagcatttacttccaagccctgagcaaagccaatggg
gaaaccaaaatcaactgtgtgagactggctactaaaggcgcgtccacccaggactcggac
gctgtggagcccgaaaagcaggtggacagcaacgtcaagatggctggtgtcatcgcaggc
atcctcatgttcgtcatcatcctactaggagtggttctcacctttaaacgcagaagaaat
gcatattcctactcttattacctgaaactggccaaaaaacagaaggagacagccaacagc
agcacccagcgtgagatggggccggtgggcacggctgacaagagcaccaccaaagtcagc
actctgcacaaggacgaccctttctccaccagcagccaggacctcaatggtttcacatcc
ccctctccctgcaccttctctgtgcaaggcaaaaccctgcaaagcaaatcccttttgaat
tcctactactcagtgtcgaaggaggctgttgcagtccctgcaacagcatcaatcgacagc
agccatagtgagttggctcagccatcgttgaccatccagacgtacccatacgggggctgt
gagtcagtagagatgtcctaccaagcaggccagttccagccagccatccgtgtagccgac
ctcctccagcacatcacccagatgaagtgtggccagggctacggcttcaaggaagagtat
gagggtctgacggaaggacaggcggccccatgggagactgccaagaaggatgagaaccgc
aacaagaaccgatatggcaacatcatcgcttatgaccacactcgtgtcagactgcaactg
ctagatggagacccccactcggactacatgaatgccaactacatagacgggtatcataga
ccaagacattacatcgccacacaaggccccatgcaggagactgtgagagatttctggagg
atgatctggcaagagaattctggcagtatcgtcatggttacgaacctggtggaagtgggc
agggtgaagtgcgtgaggtactggcctgacgagactgatgtgtacggagatatcaaggtg
acactgatcgagacagagccactggccgagtacgtcattcgcaccttcacagtccagaag
aagggacaccatgagattcgggagatccgtcaattccacttcactagctggcctgaccac
ggtgtgccctgctacgccaccggcctcctaggcttcgtccgccaggtcaagttcctcaac
cctcccgatgccggccccatcgtggcccactgcagtgctggggctggaaggacaggctgt
ttcatagctgtggacattatgctggatatggccgagaacgagggtgtggtggacatcttc
aactgcatccgcgaactgcgctcacaaagggttaacatggtgcaaaccgaggagcagtat
gtctttgtccacgatgccatcctggaagcctgcttgtgtggaaacacagccatcccagtc
tgtgaattcagagccatatactacaacattatcagactggacccacagaccaactctagc
caaattaaggacgagtttcagactctgaacatcgtgactccccgggttcggcctgaagac
tgtagcgtgggactgctcccccggaaccacgacaagaaccgcagcatggacgtcctgtct
gtggatcgctgcctgcctttcctcatctctgttgatggagagtccagtaactacatcaac
gctgccctcatggatagccataaacagccagcagccttcatcgtaacccagcacccgctg
cccaacacggccgccgacttctggaggctggtcttcgactacaactgctcctcgatagtc
atgctcaacgagatggatgcagcgcagctttgcatgcagtactggcccgagaagagctcc
tgctgctacggccccgtccaggtggagttcatctcagccgacatcgatgaagacatcatc
aatcgcatcttcaggatctgcaacatggccaggccccaggatggctaccgtttggtgcag
catttccagttcatcggctggccggcctatcgggacacgcccctgtccaagcgctccatc
ttgcagctggtgagacgtctggccaagtggcaggagcagtacgacgggggagacggacgc
accgtggtccactgcctgatgggtggtggacgtagcggtaccttctgtgccatctgcagc
atcagtgagatgatccagcaacagaacattgtagatgtgttccacaccgtcaagaccctg
aggaacaacaaatccaacatggtggagactatggaacagtacaagttctgctatgaagtt
gctctggaggcccttagctcattctga
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