Oncorhynchus nerka (sockeye salmon): 115144792
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Entry
115144792 CDS
T07952
Name
(RefSeq) receptor-type tyrosine-protein phosphatase zeta-like isoform X1
KO
K08114
receptor-type tyrosine-protein phosphatase zeta [EC:
3.1.3.48
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115144792
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
one01009
]
115144792
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
one00535
]
115144792
Enzymes [BR:
one01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
115144792
Protein phosphatases and associated proteins [BR:
one01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
115144792
Proteoglycans [BR:
one00535
]
Cell surface proteoglycans
Others
115144792
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
Carb_anhydrase
fn3
PTP-SAK
Tc-R-P
PTPlike_phytase
DSPc
PTP-NADK
GUN4_N
Y_phosphatase3
Motif
Other DBs
NCBI-GeneID:
115144792
NCBI-ProteinID:
XP_029541717
LinkDB
All DBs
Position
LG17:complement(5375662..5469014)
Genome browser
AA seq
1514 aa
AA seq
DB search
METAASRCFLLLTQLLLVCQLAEPVQGYGHRAQAAQRKFADDIDWSYAGTLNQNNWANKY
PSCSNARQSPINIEEELTQVKVQFQKLEFEGWEEAMSDMTTIKNDGKTVAVNPEGDFYVS
GGGLRGRFKVGRITFHWGLCKASSEGSEHSLSGVKYPLEMQIYCYEALHFESIDQAIKDG
GRITALSVLLETGIEDNDNYMAIIDGVNSVSRFGKSGMVGPFSLRGLLPNSTDKYFTYNG
SLTTPPCTDTVEWIVFKNTVAISDTQLEMFCEVMTMHQAGYVMLMDYLQNNFREQQQQFM
GQVFSSYTGTEEVLTPICSSEPENVQADPHNLTSLLVMWERPRAVYDAGIEKYSVTYRLA
QGEDSATFQYLTDGDQDVGAMLQDLIANTSYVVQVVAVCTNGLYGHVSEQLSIDMPFEDP
EATPYPDSTEFEGDEDYGPWAKPGEELDNDMDWTTQSTTRTRPTSTTGPPSLPLPAIRTT
TPFVQRRTPTPGTPSRTTQPNRAQTSTEQSERYRSTTRAPAEGAVSAGSRGKGRTQKYTT
TVTTPQSRTDVINTSSTKTEKGRGVAYPVTVPSGKGSGVSMATPLPESRTMATSASSLSQ
EEPPWPTSPSMPLFSSTAASFAGALLQTTQPVFNATPSSSKDHWVSALQTSAPSSSYSAS
PLTPTLPPELQTVDSSASGSTLFGEAQKELDEEWDRVQSSASGEGALPYIPTFTPSLTSE
AAATPNIDTEELSSSFYFESENGSAVTNDTVGSTATVSGVTAAAPWSLGGEVESGSGQGE
SLYDNETSSDFTITERTERDSEEEEPVAEASNSSHESRVGLARERERRAMVPLAVISTLT
FLGLIVLVGILIYWRKCFQIAHFYIEDNTSPRVISVSPTSMRTDTDKQEALPVKQFVKHV
TELHHTNAFSREFEILKECYEEVQACPACPVDLGITTDGSNHPDNKNKNRYINILAYDHS
RVRLSTQADKDGMSGDYINANYVDGFNKSRAYIAAQGPLKSSTVDFWRMVWEQNVGVIIM
ITNLVEKGRRKCDQYWPLDSQEEYGGFLVTVKSSKVLAHYTQRTFTLRNTKVKKVSLKGR
INERTVTQYHYTQWPDMGVPEYTLPVLTFVQKSSKARTDDMGPIVVHCSAGVGRTGTYIV
LDSMLKQIKEEGTVNIMGFLKHIRTQRNYLVQTEEQYVFIHDALVEAILGKETEVPSSRI
HSYVNDLLTPGPSGGTQLEKQFKLISSSNAIQCDYSAALKECNREKNRNSSLIPDERSRV
CLSTVAGETTSDYINASYLTGYRQSTEFIVTQNPLAGTVTDFWKMIWDHNAQVIVTLPGT
PSLAEGEEPYVYWPRKEQPISYEAFTVTLQSENHMCLANEEMLVVQHYVLEATQDDYVLE
VRHYRAPHWPNPDSPISSTFELLSLVKEESSSKEGPTVVHDQVGGVTAGTFCALSTLVRQ
LEAESSVDVYQVAKMFNLMRPRTFTDVEQYQFLYTAMLSLVGTQEDERMLQSSDNNGTVP
GGTASTAESLESLV
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atggaaacggctgcttcaagatgtttcctattgctcactcagctcttgctcgtctgtcaa
ttagctgaacctgtgcaaggatacggacaccgggcccaggccgcccagcgcaaattcgct
gatgacatcgactggtcctatgcggggactctaaaccaaaacaactgggccaacaagtac
ccatcatgcagcaatgctagacagtcgcccatcaacatcgaggaggagctgacacaggtc
aaagttcagttccaaaaactggagtttgagggctgggaggaggcgatgtctgatatgacc
accatcaagaatgatggcaagaccgtggcggtgaacccagagggggacttctatgtgagt
ggaggggggctgaggggcaggtttaaggtggggagaatcaccttccactggggcctctgt
aaggcttcctcagagggctccgagcacagtctcagtggggtcaagtaccccctggagatg
cagatctactgttatgaagcacttcactttgagtccatagaccaggccatcaaggacggg
ggcaggatcacagccctctctgtgctgttagagacaggcatcgaagacaatgacaactac
atggccattatcgacggagtcaacagtgtcagccgattcggtaagagtgggatggtgggt
cccttctctctccgtggcctcctgcccaactcaacagataagtacttcacctacaatggc
tccctcaccaccccaccctgcactgataccgtggagtggattgtcttcaagaacactgtg
gctatctccgacacgcagctggagatgttctgtgaggtgatgaccatgcatcaggcaggc
tatgtgatgttgatggactacctgcagaacaacttcagggagcagcagcagcagttcatg
ggacaggtcttctcctcctataccggcacggaggaggtcctcactcccatctgtagttca
gagccggagaatgtgcaggcagacccccataacctgaccagcctgctggtgatgtgggag
cggccgagggcggtgtacgacgccgggatagagaagtactcagtcacctacaggctggcc
caaggagaggactctgcaaccttccagtacctgactgacggagaccaggatgtgggggcc
atgctgcaggacctgatagccaatactagctatgtggtgcaggtggtggccgtgtgcacc
aacggtctgtacggtcacgtgagcgagcagctgtccatcgacatgcccttcgaagacccc
gaggcaacaccttatccagattctactgaatttgaaggggatgaggactatggaccctgg
gctaaaccaggtgaagaactggacaatgacatggactggacaacccaaagcactacgaga
accaggcccacatcaaccactggcccacccagcctccccttgcctgctatcagaaccacc
accccatttgtccagaggagaacccccacaccaggcactccatccaggaccactcaaccc
aaccgagcacagacttccacagagcagagtgagaggtatcgcagtacaaccagagcacca
gcagagggtgccgtctcagcaggcagcagaggcaaggggagaacccagaagtataccact
acagtgaccactccacaatcacgcactgatgtcatcaacacttcatcaaccaagaccgag
aagggcagaggggtggcgtatcctgtgaccgtcccaagcggaaaaggcagcggtgtttcc
atggccactccgctcccggaaagccggaccatggccacttccgcctcctccctctctcag
gaagaaccaccatggcctacaagtcccagcatgcccttgttttcatccactgccgcctcc
ttcgccggggcactcttgcagaccacgcagccggtgttcaacgccacaccgtccagctcc
aaggaccactgggtctcggccctccaaacctcggccccctcctcttcctactcggcctcc
cccctcactcccaccctcccccctgaactgcagacggtagacagtagtgcctctggctcg
accctgtttggagaagcccagaaggagctagatgaggagtgggacagggttcagagttca
gcctcgggggagggcgcgctcccttacatccccaccttcaccccctcactcacctctgaa
gccgccgccactcccaacatcgacacagaagaactctcctcatcgttctactttgagagc
gagaacggcagtgccgtcaccaacgatacagtgggcagcacggcaacagtatctggggtg
accgcggcggcgccctggtcgctaggtggggaggtggagagtggctcggggcagggcgag
agcctgtacgacaacgagacgtcatcagacttcactatcaccgagcgcacagagagagac
tctgaggaggaggagccagttgcagaggccagtaacagcagccatgagtccagggtgggt
ctggccagggagagagagaggagggccatggtccctctggcagtgatctccaccctcacc
ttcctgggactcatcgtcctggtgggaatcctcatctactggaggaagtgttttcagatt
gcccatttctacatagaggacaacacatcccccagagtcatatctgtttcacccacatcc
atgcgtacagatacagataaacaagaagcccttccagtgaagcagtttgtcaagcacgtg
acagagctccaccacaccaatgcattctccagagagtttgagatattgaaagagtgttat
gaggaggtgcaggcgtgcccggcgtgcccggtggacctgggtatcaccacagacggctcc
aaccatccagacaacaagaacaagaaccgatacattaatatcctggcctatgaccacagc
cgagtaagactctcaacccaggctgacaaagatgggatgagtggagattacattaacgca
aactacgttgacggtttcaacaagtccagggcctacatcgcagcccagggccctctcaag
tccagcaccgtggacttctggaggatggtgtgggaacagaacgtgggcgtcatcatcatg
attaccaacttggtagagaagggacggaggaagtgtgaccagtactggcccctggatagc
caggaagagtacggtggtttcctggtgacggtgaagagcagtaaggttctggcccactac
acccagagaaccttcaccctcaggaacaccaaggtcaaaaaggtttctctgaaggggcgg
attaacgagcggaccgtgacccagtaccactacactcagtggccggacatgggcgtgccc
gagtacactctgcccgtgctcaccttcgtccagaagtcctccaaagccaggacagatgac
atggggcctatcgtagtgcactgcagtgcaggggttggcaggactggaacctacatagtg
ttggatagcatgttgaagcagatcaaagaagagggcacggtcaacatcatgggcttcctc
aaacacatccgcacacagaggaactacctggtacagacagaggagcagtatgtgttcatc
cacgatgctctagtggaggccatcttgggcaaggagacggaggttccctccagtcgcatc
cacagctacgtcaacgacctcctgaccccagggccctccggagggacacagctagagaaa
cagtttaagctgatatcctcgtccaatgccatacagtgtgactactcagcagccctgaaa
gagtgtaacagagagaagaacagaaactcctctttaatacccgatgaaaggtcacgggtt
tgtctgtccacagtggctggagaaactacatcagactacatcaacgcctcatacctcacg
gggtaccggcagagcactgagttcatcgtgacccaaaacccgctggctggcacagtgaca
gacttctggaagatgatctgggatcacaatgctcaggtcatagtcacactgccgggaaca
ccaagcctggcagagggggaagagccatacgtgtactggccccgcaaggagcagccaatc
agctatgaggcgttcacagtgaccctgcagagcgagaaccacatgtgtctggccaacgag
gagatgctggtggtgcagcactacgtcctggaggctacacaggatgactatgttctggaa
gtgaggcactaccgggcgcctcactggcccaacccggacagccccatcagcagcaccttt
gagctgctcagtctggtgaaggaggagagctcctccaaggagggccccacggtggtccac
gaccaggttggcggtgttactgcgggaaccttctgtgccctgtctactctggtgcgccaa
ctagaggcggagagctctgtggacgtgtaccaggtggccaagatgttcaacctcatgagg
cccaggaccttcactgatgttgagcagtatcagttcctatacacagccatgctgagtctg
gtgggcacacaggaggacgagaggatgctccagtcctcagacaacaacggaacagtccca
gggggcaccgccagcacagcagagagccttgagtccctggtgtaa
DBGET
integrated database retrieval system
