Oncorhynchus nerka (sockeye salmon): 115144800
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Entry
115144800 CDS
T07952
Symbol
deaf1
Name
(RefSeq) deformed epidermal autoregulatory factor 1 homolog isoform X1
KO
K23041
deformed epidermal autoregulatory factor 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115144800 (deaf1)
03019 Messenger RNA biogenesis [BR:
one03019
]
115144800 (deaf1)
Transcription factors [BR:
one03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
SAND domain-containing proteins
115144800 (deaf1)
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115144800 (deaf1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAND
zf-MYND
AOC_like
Motif
Other DBs
NCBI-GeneID:
115144800
NCBI-ProteinID:
XP_029541730
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All DBs
Position
LG17:5568986..5600788
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AA seq
550 aa
AA seq
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MDETDSATKGLVLDEESIDAAGEPVEEGVDSDTESEAEVTTMTVMGEPGNIEIGTESLPN
SDDAETAFAEVTTVTVGDVQAAEDNVFTATSASIPEHVLTGRTTLQIGDGLNPQKATLIV
VHTEGIVDATGLKNAAAALSSAPQTPPTPMNPGQEKDGSKYNWDTSVYNNELPVRCRNTS
GMLYKNRLGSGGKGRCIKHSNHWYTPTEFEGMSGRASSKDWKRSIRYAGRPLQCLIQERI
LNPHAASCTCAACCDDLSLCTKDSPSYAGENINMTGPVRLFVPYKRRKKENEQPTTPEKK
DLPLPPPKNITLAPGATFTVSPSGQITTSGTLTFDRTSPGDATALLSEGTAHGEVFTSTE
GTYMLTALPALAMAPQAKVESPSSSPGLVNGGLEVSGVRESQRTWLYLEETANSLLSTVQ
QLKALIDQAKQACHCQAGHDAFSQDKIHGSRKECTLTQPFQSQISFQHPDDPEGKRGSEI
TEIIIKQMCVNCGREAMSQCTGCHKVNYCSTFCQRKDWKEHQHNCCQTSGTVAVQEEVPM
STIDMDKVKV
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggacgagacggactcggcaacgaagggactagtgttggacgaggagtccatagacgct
gccggagagccggtggaggagggggtggattcggatactgagtcggaggccgaagtcacc
acgatgacagtaatgggagaaccggggaacatcgagattgggaccgagtccttgccgaac
tctgacgatgccgagacagctttcgcagaagtcacaacagtcactgtgggggatgtccaa
gcagccgaggacaatgtgttcactgccacctcagcctccataccagagcatgttcttact
ggcaggaccaccctacagattggcgacggtctcaatccccagaaggccactctgatagtg
gttcacactgaaggaatagtggacgcaacaggactgaagaacgctgcagccgccttgtcc
tctgccccccagactccccccaccccaatgaatccagggcaggagaaagatggctccaag
tacaactgggatacatctgtgtacaacaacgagctgccagtgcgctgcaggaacaccagc
ggcatgttgtacaagaacagactgggctcaggtggaaagggacgctgcatcaagcacagc
aaccactggtacacgcccactgagtttgagggcatgtctggccgggcgagcagcaaggac
tggaagagaagcatccgctatgcaggccgtcccctgcagtgcctaatccaggagcgcatc
ctcaacccccatgccgcgtcctgcacttgtgcggcctgctgtgacgacctctcgttgtgt
accaaggatagtccatcttacgcaggggagaacattaatatgactggcccggtcagactg
tttgttccttacaagagacgcaagaaggagaacgagcagccgaccactccagagaagaag
gacctccccctcccaccgcccaagaacatcacactggcaccgggggcaacattcacagtg
tctccgtcaggccagatcaccacgtcagggaccctgaccttcgaccggacgtctcccggg
gacgccacagcccttctctctgagggcacggcacatggcgaggtcttcaccagcacagaa
ggtacctacatgttgacagcgctaccggcactggccatggccccccaggccaaggtggag
tctccatcctcatccccggggctggtgaacggggggctggaggtgtctggggtaagggag
agccagaggacatggctttacctggaggagacggccaacagcctgctgagcacggtgcag
cagctcaaggcactgatcgaccaggccaagcaggcctgccactgccaggcaggccatgat
gccttcagccaggacaagatccacggcagcaggaaggagtgtacactcacccagcccttc
cagagtcagatatcattccagcacccagacgacccagaggggaagagaggctcagaaatt
acagagatcatcatcaagcaaatgtgcgtgaactgtggacgggaggccatgagccaatgc
acgggatgccacaaggtcaactactgttccaccttctgtcagagaaaggactggaaggaa
caccagcacaactgctgccagaccagtgggactgtggctgtccaggaggaggtgcccatg
tcaaccatagatatggacaaagtcaaggtctag
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