Oncorhynchus nerka (sockeye salmon): 115144802
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Entry
115144802 CDS
T07952
Name
(RefSeq) ATP-binding cassette sub-family C member 8-like
KO
K05032
ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115144802
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
one02000
]
115144802
Transporters [BR:
one02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
115144802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_29
nSTAND1
ABC_ATPase
AAA_23
TraD_N
Motif
Other DBs
NCBI-GeneID:
115144802
NCBI-ProteinID:
XP_029541733
LinkDB
All DBs
Position
LG17:2993728..3144664
Genome browser
AA seq
1425 aa
AA seq
DB search
MSLAFCGNENNSLAYNVERGILNNGCFLDALNVVPHIFLLFITFPILFIGWGSQSSKVHI
HHSTWLHFPGHNLRWLLTFILLFVLVCEIAEGIVSDGFTQSLHLHLYMPAGLAFMAGITS
IIYYHNIETSNFPKLLLALLFYWVLAFLMKTIKFAKYTEHSVGLRQLRYCITGLLALLYG
LLLAVEINVILGRRYLCFTEATEVKPPEDLQDLGVRFLQPFVNLLSKATYWWMNTFITAA
HRRPIDLKVIGKLPIAMRALTNYLKLRKAFESQRRPLGSMPQGPKWIWRALCQAFGRPLI
ISITFRFLADLLGFAGPLCISGIVHHISKDNRTIQPPIKLLGVYFISSQEFLANAYVLAV
LLFFALILQRTFLQASYYVAIETGINLRGAIQTKIYNKIMRLCTSNMSMGGLTVGQICNL
VAIDTNQLMWFFFLCPNLWAMPVQIIVGVILLYYLLGISALIGATVIAVLAPVQYFVATK
LSQAQKSTLGGIWLRGIKLLKLYAWEHIFCHSVEETRGKELTSLQTFALYTSISIFMNAA
IPIAAVLTTFVVHVHISEEADLSPAVAFASLSLFHILVTPLFLLSSVVRSTVKALVSAQK
LSEFFSSDEIGDEQEPNATMPTGPSNHNTIPSGPRNHNNKYQAVPLKVVNRKRHPRDDWN
NYSHEGGNPPPQEGDQDLCIRITSGYFTWTDGTPTLSNVNIKVPFGQLTMIVGQVGCGKS
SLLLAALGEMQRVSGTVTWNILPSLDSEGDDSPTSDKDAADDGDIQKRGSVAYASQKPWL
LNATLVENITFEMPMIKPRYKAVIEACSLQPDIDILPQGDQTEIGERGIILSGGQRQRIG
VARALYQQTNVVLLDDPFSALDIHLSDHLMQEGICKLLREEKRTVVLVTHKLQYLPHADW
IIAMKDGTIQTEGTLKDIQNSDPKLFEQWKTLMHRQDWEFEKETVAESMTVLERKNLRRA
MYSKEAAKTEEEHEVSYPCECGFSHSWYLSVFSVLCCLGIVLCLVTSVAVEWTGLRVAKE
LHHNLLSKIILAPMRLFETTPLGNILNRFSSDTNTIDQHIPATLECLSRSTLLCVSALGV
ISYVTPVFLIALVPLAIACYFIQKYFRVASRYESRFRQRLLEYTDANNIASLFPLPSQQQ
SRLSPAWQWEYVGACVVLIAAVASISNSLYNHLSTGLVGLGLTYTLMVSNYLNWMVRNLA
DMEVQLGSVKRINGLLKTEPENYEGLMAASQVPDGWPRQGEIQIQNLSVRYDTTLKPVLK
QVNAHISPGQKVGICGRTGSGKSSFSLAFFRMVDMFEGRIIIDDIDIAKLPLQTLRSRFS
IILQDPILFSGTIRFNLDPEMKATDDMLWEALEIAQLKPVVKTLPGGLDAMVTEGGENFS
QGQRQLFCLARAFVREVYSHPQHRMKPQPPIDMATVRQEGVFGER
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atgtccttggcgttctgtggaaacgagaacaattcgttggcatacaacgtggaacgcggc
atcctcaacaacggctgcttcctggacgcgctcaacgtggtgccgcacatcttcttgctc
ttcatcactttccccatcctcttcattggctggggcagccagagctccaaggtgcacatc
caccacagcacctggctgcacttccctggtcacaacctgcgctggctcctcaccttcatc
ctcctctttgtcctggtctgtgagattgctgagggaattgtttccgatgggttcacccag
tccctccacctgcacctgtacatgcctgcaggcctggccttcatggctgggatcacctcc
atcatctactaccacaacatagagacctccaacttccccaagctactgctagccctactg
ttctactgggtcttggcctttctgatgaaaaccatcaagttcgccaagtacacggagcac
agcgttggcctgagacaactccgctactgcatcacaggactcctggccctgctctacgga
ctgctactggctgtggagatcaatgtcatactgggcaggcgctacctgtgtttcactgag
gctacagaggtgaagcctccagaggacctgcaggacctgggggtgaggttcctgcagccc
ttcgtcaacctgctgtccaaggccacctattggtggatgaacacattcatcacggcagcc
caccgccgccccatagacctcaaggtcatcggcaagctgcctatcgctatgcgagccctc
accaactacctgaagcttcgcaaggctttcgagagccagaggaggcctctgggctctatg
ccgcagggccctaagtggatttggagggccctatgccaggcgtttggacggcccctcatc
atcagcatcaccttccgcttcctggctgaccttctgggcttcgctgggcccctgtgtatc
tctggcatcgtccatcacatcagcaaggacaaccgtaccatacagcccccgataaagctg
ctgggggtctactttatctcctctcaagagttcttggcgaatgcctacgtgctagccgtg
ctgctgttcttcgccctcatcctgcagagaacattcctccaggcctcgtattatgtggct
attgagaccggcatcaatttacgaggggctatacagactaagatctacaataagatcatg
cggctgtgcacctccaacatgtccatgggaggactgaccgtaggacagatttgtaacctg
gtggccatagataccaaccagctcatgtggttcttcttcctctgtcccaacctgtgggcc
atgccagtccagatcattgtgggggtgattctactctactacctcctggggatcagtgcc
ttgatcggggccacagtcatcgctgtcctggcccctgtccagtactttgtggccaccaag
ctgtcccaagcacagaagagcactctgggggggatttggctgcggggaatcaagctgctg
aagctgtacgcctgggaacacatattctgtcacagtgtggaggagaccaggggcaaggag
ctcaccagtctgcagacctttgccctatatacgtccatatctatattcatgaacgcagcc
atccctatcgcagctgtcctgaccacgtttgtggtccatgtgcacatctctgaggaggct
gacctgtcccctgctgtagcctttgcctccttgtccctgttccacatcctggtcactcct
ctcttcctgctctccagtgtggtacggtccacggtcaaggcccttgtcagtgcccagaag
ctgagtgagttcttcagtagtgatgagattggagatgagcaggagccaaatgctaccatg
cccacgggccctagcaaccacaataccattccctccggccccagaaaccacaacaacaag
taccaggcagtgcctctgaaggtggtgaacaggaagagacatcccagggacgattggaac
aactacagccatgagggaggcaacccacccccccaggagggagaccaagacctctgcatc
aggataaccagtggatatttcacctggacagatgggactcccaccctgtctaacgtaaac
atcaaggttccctttggtcagctgactatgatcgtgggtcaggtgggttgtgggaagtcg
tccctgttgctggcagctctgggagaaatgcagagagtctctgggactgtcacctggaac
attttgcccagcctggactcagagggagatgacagccccacatcagacaaagatgctgct
gatgatggagatatccagaagagaggctctgtggcctacgcttcccagaagccctggctg
ctcaatgcgacgctagtggagaacatcaccttcgaaatgcccatgatcaaacccaggtac
aaggctgtcattgaggcgtgttccctgcagccggatatcgacatcctgccacagggagac
cagacggagattggagagaggggtataattctgtcaggagggcaacgccagcgtataggt
gtagccagagccctgtaccaacagaccaatgtggtcttactggatgacccgttctcagcg
ttggacattcacctgagtgaccacctgatgcaggagggcatctgcaaactgctgagagaa
gagaagaggaccgtggtgctggtcactcacaaactacagtacctaccacatgctgactgg
atcatagcgatgaaggacggcaccattcagaccgaggggactctaaaagacatccagaac
tctgatcctaagctgtttgaacagtggaagaccctgatgcaccggcaggactgggagttt
gagaaggagacagtggctgagagtatgacggtgttggagcgtaagaacctgcggagggcg
atgtactccaaggaagctgccaagactgaggaggagcacgaagtttcctatccttgtgag
tgtggtttcagccactcgtggtacctgtcagtgttcagtgtgctgtgctgtctgggcatc
gttctgtgtctggtcacctctgtggctgtagagtggacaggcctgagagtggccaaagaa
ctacaccacaacctgctcagcaagatcatactggcacctatgaggctgtttgagaccact
cccctgggtaacatcctcaacaggttctcctctgacaccaacaccatagaccagcacatc
cctgccaccctggagtgtctgagtcgctccaccctgctgtgtgtgtcggcgctgggggtt
atctcctatgtgacccctgtgttcctcattgctctggtgcccctggccatcgcctgctac
ttcatacagaagtacttccgggttgcctccaggtacgagtccaggttcagacagaggtta
ttggagtatactgatgccaacaacatcgcatctctcttccctcttccctcacagcagcaa
tcgcggctaagtcccgcatggcaatgggagtatgtaggagcctgtgttgttctgatagca
gccgtggcctccatcagcaactctctgtacaaccacctctccactggcctggtgggactc
ggactcacctacacactcatggtatccaactacctgaactggatggtgcggaacctggca
gacatggaggttcagctgggttcagtcaagaggatcaacggcctgctgaagactgagcct
gagaactacgagggactgatggctgcatctcaggtgccggatggctggccacggcaagga
gagattcagatccagaacctgagtgtgcgttacgacaccaccctgaaacctgtcctcaaa
caagtcaacgcacacatcagccctggacagaaggtggggatctgtggtaggacaggaagt
gggaagtcttctttctccttggccttcttccgcatggtcgacatgttcgaggggcgtatc
atcatagatgacattgacatcgccaagctgcctctgcagactctgaggtctagattctcc
atcatcctccaggaccccatcttattcagcggaaccatccggtttaacctggacccagag
atgaaggctacagacgatatgctgtgggaggctctggagatcgctcagctcaaacctgta
gtcaagactttaccaggaggactggacgccatggtgacggagggaggggagaacttcagc
cagggccagagacagctcttctgtctggccagagccttcgtcagggaagtctatagccat
cctcagcataggatgaagccacagcctcctatcgacatggccacggtgaggcaagaaggg
gtgtttggagagaggtga
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integrated database retrieval system
