Oncorhynchus nerka (sockeye salmon): 115144804
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Entry
115144804 CDS
T07952
Symbol
cdhr5
Name
(RefSeq) cadherin-related family member 5 isoform X1
KO
K16505
cadherin-related family member 5
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115144804 (cdhr5)
Cell adhesion molecules [BR:
one04515
]
Cadherins
Cadherin related
115144804 (cdhr5)
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
DUF6039
Motif
Other DBs
NCBI-GeneID:
115144804
NCBI-ProteinID:
XP_029541734
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Position
LG17:5701603..5714782
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AA seq
611 aa
AA seq
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MEKKYPHFTLRTLLSFLLVFLLHRSTEAQQICSMPGATPPTIRENNAVGAVVTTITTEEG
VTLTIASNPADSFGLNGNDLTAVKVLDYETKTSFTIDLLCVKGDQFLTLIIVVLIENVND
NPPVFAESQYTLNVDELSPVGKSVGAIVATDADKDRLYYSLVPDTEGFRLQENSPNILVQ
HALDYDAVTSVTLILSAQDTPSSTPPSFTATATIHVNIMDIDNRPPWFQPCTETILDMSK
ICLSSGYTGTVNLTEQVVGALPLLPGPVHAIDGDKGLNVPIMYRFPTGSESDIFQINQNT
GDITMSKAADIAGPLTLTVLALQTSNGDQFATTTVTIVVVKKSVNPPQFEKMEYEGFISA
DAGVDSMVLESKASNRPLKVQAKDTDYADGINPDVRYEVQGSTEFTITPQGFILMTKNVM
PGTVSMNLGKGPGELKDGVQYTNEGFQNDGDTSSVGSKGPEEMDGKRSIGNGVTSRAVEE
NVMKVSAPLYSNLLLDTSSLAGSDKADSEKEVKPILTKERRVEEGYKSVWFKEDIDPNAK
EEVVIIPDNGEREGDDDDDDEEEEGFREEEEEYDNSSPQTPKVLFSDADMDDGRGVRFED
FEKEKIQTSDL
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaaatatccacactttactttgaggaccttgttgagctttctgcttgtgttt
ttgcttcacagatcaactgaagcgcaacagatatgctccatgcctggggcaacgcctccc
actattagagagaacaacgctgttggtgctgttgtgaccacaatcaccacagaagaagga
gtgaccctaactattgccagtaatcctgcagactcttttggtctgaatggcaatgatctt
acagcggtaaaagttttggactatgagactaaaacgtctttcaccattgaccttctttgt
gtaaaaggtgaccaatttctcactctaataatagtggtacttattgagaatgtgaatgac
aacccgccagtatttgcagaaagccagtacactctcaatgtcgatgagttgtcacctgta
ggcaaaagtgtcggtgcaattgtagcaacagatgcagataaggatcgactctattacagc
ctagtgccagatacagagggttttagactgcaagaaaacagcccaaatatactagtgcaa
catgctcttgactatgacgcagtgacaagtgtgacacttatattatctgctcaggatacc
ccctcatccacaccaccttcattcactgccacagccactatccatgtcaacatcatggac
attgacaaccgtccaccatggtttcagccctgcacagaaaccatacttgacatgtccaaa
atctgcctcagctctggatatacaggaacagtcaacttaacagagcaagtggttggtgca
ttgccattgctgccaggtccggtgcatgccattgatggtgacaaaggcttaaatgtgcct
ataatgtacagatttccaaccgggtctgaatctgacatttttcagatcaatcagaacact
ggggacatcaccatgtcgaaggcggcagatatagcgggcccactgaccttaacagttttg
gctttacagacatccaacggcgaccagtttgcgaccacaacggtcactatcgttgttgtg
aaaaagagtgtgaacccgccgcagtttgagaagatggagtatgagggcttcatctctgca
gacgcgggtgtagacagcatggttctggagagcaaagcctccaacaggccactcaaggtc
caggccaaggacacagactatgctgatggcatcaaccctgatgtgagatatgaggttcag
ggaagcactgaattcaccattaccccgcaaggcttcatcctcatgactaaaaacgttatg
ccaggcactgtttccatgaatcttgggaaaggtcccggtgaactcaaggatggggtgcag
tacaccaacgagggcttccagaatgacggagacactagcagcgtgggatccaaaggccca
gaggagatggatgggaagcggtccatcgggaatggagtgacctccagagctgtggaggag
aatgtcatgaaggtctcggctccactgtactccaaccttctgcttgacaccagcagcctg
gcagggtctgataaggccgacagcgagaaggaggtgaagcccatcctgaccaaggagagg
cgtgtggaggagggctacaagtcagtctggttcaaagaggacattgaccccaatgccaag
gaggaagtggtcatcatacctgacaatggggagcgggaaggggatgacgatgatgatgat
gaggaagaggaggggtttagagaggaggaagaagaatatgacaactcgtcaccacagacc
ccaaaggtgttgttctctgatgctgatatggatgatggccgtggagtgaggtttgaggat
tttgagaaagaaaagatccagacgtctgacctgtga
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