Oncorhynchus nerka (sockeye salmon): 115144887
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Entry
115144887 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: A disintegrin and metalloproteinase with thrombospondin motifs 9-like
KO
K08624
a disintegrin and metalloproteinase with thrombospondin motifs 9 [EC:3.4.24.-]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
one01002
]
115144887
Peptidases and inhibitors [BR:
one01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
115144887
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
GON
TSP_1
ADAMTS_spacer1
Reprolysin
Pep_M12B_propep
TSP1_spondin
ADAMTS_CR_2
TSP1_CCN
Reprolysin_5
ADAMTS_CR_3
Reprolysin_3
Reprolysin_2
Reprolysin_4
BLM_N
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
115144887
NCBI-ProteinID:
XP_029541863
LinkDB
All DBs
Position
LG2:32461386..32533417
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AA seq
1964 aa
AA seq
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MHMLFWGLGFLLFLPDFLNIVSSTGRSLLSSRKAEISEQLGAYEIVTPERVNEAGDNFPT
SVHFKRKRRSVEDSPGNSSDQWALPSIHYKISAFGQNYHLNLTPESGFIAPLYTVTVLGA
PIVNITDFTPEEETEEDTEYQHCFYKGHVNAQTENTAVISLCSGLLGTFRSPEGEYFVEP
LHSYNGELYEEEHTKPHIVYRKKASENEAAVEDTACDTSGHKHRHKRNSDKVKRRPLSSS
SSSMLDDLDDLDDLSAGLTADPFSRTERESGRRPANDSSGDSGPHRRSKRFLSYPRFVEV
MVVAXSKMVEHHGSNLQHYILTLMSIVSSIYKDPSIGNLINVVIVKLVIINNELDGPTIS
FNAQTTLKNFCIWQQRQNHQDENHHSHHDTAILITRQDICRARDKCDTLGLAELGTVCDP
YRSCSISEDNGLSTAFTIAHELGHVFNMPHDDSNKCKEEGVKIQQHVMAPTLNYYTNPWM
WSKCSRKYITEFLDTGYGECLLDEPISRPYSLSQQLPGRIYNVNKQCELIFGPGTQVCPY
MVQCRRLWCTSPEGAQRGCRTQHMPWADGTECSPGKASIRETYRKMKGSDREREGNGQMG
INRKEHDATAPVRRRGEAWSPLGSLRADVWRRIKIAVRECNQPVPKNGGKYCVGRRMKFR
SCNSEPCSKQKKDFREEQCAAFDGRHFNINGLPPNVRWVPKYSGIQMKDRCKLFCRVAGS
TAYYQLRDRVIDGTPCGPDTNDICVQGLCRQAGCDHVLNSKARRDKCGVCGGDNSSCKTV
ADTFNMVRYGYNEVVRIPSGATNIDVRQHSYSGKPEDDNYLAVSNSRGDFLLNGEFVVSM
FKREIKVGNAVIEYSGSDHVIERINCTDRIEEEIIVQVLSVGNLYNPDVRYSYNIPIEDK
PQQFVWDAYGPWQDCSRPCQGERKRKILCSRESDRVVVSDQRCHGAARPAMVTEPCNAEC
EIRWHVARKSECTVPCGVGYRTLEIYCAKLSRADGKTQKVDERYCSSQRKPDDKESCHGD
CNPGGWEYSSWSECSKSCGGGSRRRAAVCGKSSEAGSDESKCSQRDKLTTVQNCNEFLCP
AWKTGDWSECLVTCGKGYKHRQTWCQFAEDRLDDRFCDSMSKPESVQTCQQQDCASWQVG
PWGQCTTSCGPGYQMRAVKCVVGSYGSVMDDTECNAATRPTDTQDCELTQCPISHPVPPG
TKVPSHLPHKTQWRFGSWTQCSATCGKGTRMRYVSCRDNQGGVAEDSACSHLAKPPAREV
CSVVACGQWKVLEWTSCSVSCGQGKTTRQVVCVNFSDQIVDVVECDADDRPATEQECAMS
QCPAARSSDSRPLPSPSGGPRNNLPTTADGRGGGRAQAHQWRTGPWGACSSTCAGGFQRR
VVVCQDENGYAVNNCEEHSKPIEQRSCESGPCPQWVYGNWGECTKPCGGGIKTRLVACQR
PNGERFNDLSCEILDKPPDREQCNTQSCPSNPHWSTDPWSSCSSACGKGSKNRKVSCVTR
SGRPVPEDNCKHLTQPSKERSCRGRRCPKWKAESWGECSASCGNGIQEREVFCEFGNRRS
PEETECPPSSRPASSQTCRVTDCPSPYRWSKGEWQSCSKSCGSGHRRRAVLCMDQTGEEV
HEMFCVDQRRPDDSESCNTHVCEFIWITGDWTECSASCGQGYHRRLVSCSEVHGGNDNYE
YGHQSLSNCPGTPPESYMPCSQSPCPPTHEWRVGVWGPCSVSCGGGVMERTVQCVSTEGQ
GSGSCPSDTKPEASKVCSSPACHLPTSCSDVQSLSGVQPDGEQFLNVQGKALKVYCAGMQ
TDRPQEYLTLTTGEGENYSEVFGFRLIDPTQCPANGTRREDCECRRDYTAAGLSTFTRVR
LDLSKMHIITIDWQFAFTRDGHRVPFATAGDCYSAARCPQGRFSINLSGTGFQLAEETKW
ISQGNYAVADIHKSQDGSRVTGMCGGYCGKCTPSSGSYLLITVA
NT seq
5895 nt
NT seq
+upstream
nt +downstream
nt
atgcatatgctgttttggggactagggtttttgctatttctccctgactttttgaatata
gtgtcatccacggggagatcgctattgagttcaagaaaagctgaaatttccgagcagctt
ggcgcatatgagattgtaactccggagcgagtgaatgaagccggtgacaactttcccacg
agcgtgcacttcaaaaggaaaaggcgtagtgtggaggatagcccaggcaactcctctgac
caatgggccttgccatcaatccattacaaaatatctgcgtttggacagaactatcacctc
aacctgacacccgagtcaggatttatcgctccgctatacactgtgacagtacttggagca
cctatagttaacataacggatttcaccccggaggaggagacggaagaggatacggagtat
cagcactgcttctataaaggacatgtgaatgctcaaacggagaacaccgcagtcatcagt
ctctgctctggattgcttggcactttcaggtcaccggaaggggaatattttgtggagccc
cttcacagttacaatggagaactctatgaagaagaacacaccaaacctcatattgtgtac
agaaagaaagcctctgagaatgaggcagccgtggaggacactgcttgtgacacatcagga
cataaacacagacacaagaggaacagcgacaaggtgaagagacgtccgctgtccagcagt
agcagcagcatgctggatgacctggacgacctggacgacctgtctgcaggcctgactgcc
gatcccttctccagaacagagagagagagcggcagacggccggctaatgacagcagcggc
gactcaggacctcacaggagatcaaagcgcttcctctcctatccccgctttgtagaagtc
atggtggtggcanacagcaagatggtggaacatcacgggagcaaccttcagcactacata
ctcacattaatgtctatcgtgtcttccatctacaaggatcccagcatcggaaatctgatt
aacgttgtgattgtgaagttagtcataatcaacaatgagctggatggcccaaccatttcc
ttcaatgcacagaccactttaaagaacttctgtatctggcaacagaggcaaaatcaccaa
gatgagaatcatcactcccaccacgacacagccattctcatcaccaggcaagacatctgc
cgagcgcgggacaagtgtgacacattagggcttgcagagcttggcactgtgtgtgatcca
tacagaagctgcagtattagtgaggacaatgggctcagcactgcgttcactatcgcccat
gaactgggccatgtattcaacatgccccatgatgacagcaacaagtgcaaagaggagggg
gttaaaatacagcagcatgtgatggcgcccacactcaactactacactaacccctggatg
tggtccaagtgtagcaggaaatacatcacagagttccttgacacagggtatggagagtgc
ttacttgatgagcccatttctaggccatacagtctgtcgcagcagctgcctggacggata
tacaatgtcaataaacaatgtgaattgatatttgggccgggaacacaggtgtgcccatat
atggtccagtgccgcagactgtggtgcaccagcccagagggggcccagaggggctgcagg
acccaacacatgccttgggctgacgggaccgagtgctctccaggaaaggcaagtatcaga
gagacgtaccgcaagatgaaaggatctgatagggagagggaaggaaatggacagatgggg
ataaatagaaaggagcacgacgccaccgcccccgtgagacggcgtggggaagcctggtct
ccgttgggctctctgcgcgcggacgtgtggcgtcgcatcaagattgccgtgcgcgagtgc
aaccaacctgtgcccaagaacggggggaagtactgtgtggggcgcaggatgaagttccgc
tcgtgtaactcagagccctgctccaagcagaagaaagacttcagagaggagcagtgtgct
gcctttgatggccggcacttcaacatcaatggtctacctcctaacgtgcgctgggtaccc
aagtacagcggaattcagatgaaggatcgctgtaagctgttctgcagggtggctggcagc
acggcctactaccagctcagggaccgggtcatcgacggcacgccatgtggccccgacacc
aacgacatctgtgtgcagggcctgtgcaggcaagcgggatgtgaccatgtgttgaattcc
aaggcgaggagagataagtgtggtgtgtgtggcggtgacaactcctcgtgcaagaccgtg
gcagacaccttcaacatggtgcgctacggatacaacgaagtggtgagaatacccagtggt
gctacaaatattgatgttcgtcaacacagctactcagggaaaccagaggacgataactac
ctcgctgtttcaaacagtcgtggggacttcctgctcaatggcgagtttgtagtcagcatg
tttaaaagggaaatcaaagtgggcaatgccgtcatcgagtacagcggatccgaccacgtc
atcgagagaatcaactgcactgaccgcatcgaggaggagatcattgtccaggtgctttct
gtaggtaacttgtacaacccagacgtcaggtactcctataacatccccatcgaggataaa
ccccagcagtttgtctgggatgcctacgggccctggcaggactgcagcaggccctgccaa
ggagagcgtaagaggaagatcctgtgtagtagagagtcggaccgtgtggtggtctcagac
cagaggtgccatggggccgccagaccagccatggtcacagaaccctgcaacgcagagtgt
gaaatcaggtggcatgtggcgaggaagagcgagtgcacagtcccatgtggggtgggatat
cgtacgctggagatctactgcgccaaactcagccgtgccgatggaaagacccagaaggtg
gacgagcgttactgcagcagtcaacgcaaacctgacgacaaggagagttgccatggagac
tgtaacccaggaggatgggagtactcatcttggtcagagtgctccaaaagctgtggagga
gggtcccggcgtcgtgcggctgtgtgtggaaagtcttctgaggcgggaagtgatgagagc
aagtgcagccagagagacaagctgaccaccgtccagaactgcaatgagttcctatgtcct
gcgtggaagaccggagactggtctgagtgcctggtgacgtgtgggaaagggtacaagcat
cggcagacatggtgccagtttgcggaggaccgactggacgaccgcttctgtgactcgatg
tccaagcctgagtccgtccagacgtgtcagcagcaggattgtgcttcgtggcaggtcgga
ccatggggacagtgcactacctcgtgtggacccggctaccagatgcgagcagtgaagtgc
gttgtggggtcatacggatccgtcatggacgacactgaatgtaacgctgccacgcggccc
actgacactcaggactgcgaactgacccagtgtcccatcagtcacccggtaccgccgggg
accaaagtgccctcccacctcccacacaaaacccagtggaggttcggctcctggacacag
tgtagcgccacttgcggcaaagggacccggatgcgctatgtcagttgccgtgacaaccag
ggtggggttgcggaggattctgcctgctcccacctggccaagcccccggccagggaggtg
tgctctgtagtggcctgcggacagtggaaggtccttgaatggacatcttgttctgtatcc
tgcgggcaggggaagaccacgcgccaggtggtgtgtgtgaacttcagtgatcagatagtg
gacgtagtggagtgtgacgctgatgaccgtccggccacagagcaggagtgtgccatgtcc
cagtgccctgctgcccgctccagtgactctcggcccctcccttcacccagcgggggcccc
cgcaataacctgcccacaactgctgatgggcgcggtggagggcgagcccaggcccaccag
tggagaacaggaccctggggagcgtgctcgagcacgtgtgcgggcggcttccagaggcgt
gtggtagtgtgccaggatgagaatggttatgctgtcaacaactgtgaggagcactccaaa
cccatcgagcagcgctcctgtgagtccggaccctgtccacagtgggtctatgggaactgg
ggagagtgtaccaagccgtgtgggggaggaataaagacgcggctcgtggcgtgtcaaagg
cccaacggagagcgctttaacgatctgagctgtgagattcttgacaaaccgcccgaccgt
gagcagtgcaatactcagtcgtgcccgtctaacccccactggagcacagacccatggagc
tcgtgttcttccgcctgtggtaaaggatcgaagaaccgtaaggtgagctgtgtgacccga
tccggtcgacctgttccagaggacaactgtaaacacctgacccaacccagcaaggagagg
agctgccgggggcgccgctgccccaaatggaaggcagagagctggggagagtgctcagcg
tcatgtggcaatggaatacaagagcgggaagttttctgtgagtttggaaaccggcgcagc
ccggaggagactgaatgccccccatcctcccgtccggcctccagccagacctgccgggtc
actgactgcccgtctccgtaccggtggagcaagggagagtggcaatcgtgtagtaagtcg
tgtgggtcgggccaccggcgtcgagcggtgctgtgtatggaccagacaggggaggaggtc
catgagatgttctgtgtggatcagagaaggccagatgactctgagagctgtaatacccac
gtctgtgagttcatctggatcacaggggactggacagagtgctcggccagctgtggacag
ggataccacagacgcctagtctcctgcagtgaggtgcatggtgggaatgataactatgag
tatgggcatcagtctttgtccaactgccctgggaccccccctgagagctacatgccgtgt
agccaaagcccctgtcctccaacacacgagtggagagttggagtctggggaccttgttca
gtaagctgtggaggtggggtgatggagaggacagtgcagtgtgtgtctactgagggacaa
ggcagtggcagttgtccctcagacactaaaccagaagccagcaaagtctgcagcagccct
gcctgccatctgcccactagctgcagtgacgtccagagtctgtctggcgtccagcctgat
ggtgaacagtttctcaacgtacaaggaaaagcactcaaagtctactgtgcaggaatgcag
actgacaggccgcaggagtacctcaccttgacgaccggagagggagagaactactctgaa
gtctttggcttcagactgatagaccccacacagtgccctgctaacgggaccaggagagag
gactgtgagtgtaggagagactacaccgctgcaggcctctccaccttcaccagagtacga
ctggacctcagcaagatgcacatcatcaccatagactggcagtttgctttcacacgcgac
ggccacagagttccctttgccacagctggagactgctacagcgctgcccggtgtccacag
ggtcgattcagcatcaacctctcagggacaggcttccagctagctgaggaaaccaagtgg
atctcccaaggaaactatgcagttgctgatatacacaaatcccaggatggcagcagagta
acaggaatgtgtgggggttactgtgggaaatgcactccgtcctccggctcttacctgctc
atcacagtggcctaa
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