Oncorhynchus nerka (sockeye salmon): 115144912
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Entry
115144912 CDS
T07952
Name
(RefSeq) transducin-like enhancer protein 1 isoform X1
KO
K04497
groucho
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04310
Wnt signaling pathway
one04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
115144912
04330 Notch signaling pathway
115144912
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115144912
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
ADF / Cofilin
SCMC complex
115144912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TLE_N
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_NUP159_NUP214
Beta-prop_IP5PC_F
WD40_RFWD3
HALZ
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
115144912
NCBI-ProteinID:
XP_029541903
LinkDB
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Position
LG17:10652315..10704031
Genome browser
AA seq
858 aa
AA seq
DB search
MEESQIYILFKYKAGFNCMATRMNELSRKCPRMRGRRFFLENSAPRMFPQNRPPAPLQPP
PGSSASAAAAAASGAPQALKLTYPETLDRIKEEFQFLQTQYHSLKMECEKLATEKTEIQR
HYVMYYEMSYGLNIEMHKQTEIAKRLNVICAQLIPFLSQEHQQQVVQAMERAKQVTMGEL
NASIGQQLQAQHLSQHVAQGLQGLHSMQMGPHPGGLPHPGLALGGGSSLLALSGALGAQL
AAKEGHERAHLEAAAAAAAAEHHRGWLRGRGAMLPIMDVDREAGPSSMSNGDKGRTADYL
SNGKKRRADEKEFMTDYGSDADKSDDNLVVDEDPSSPRSVHSYSSRENGLDKLPPSRKDA
PPQASPASLASSSSQASPSRSKDREPPREKSSTPGMKPGTPHGSQDSSTPGPSAPPQFRP
VPGKPGVDPLGKTKNIMDHMSLGLRNPLAVQGAYPPGAFSLPPPGVNGELAGAAAAYGAG
LHLVSPQMNGSAAAAAAAGYGRSPVVGYESPHPHMRVPGLPASLQSTASGKPAYSFHVSA
DGQMQPVPFPPDALLGPGIPRHARQIHTLNHGEVVCAVTISTSTRHVYTGGKGCVKVWDI
SQPGSKSAMAQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLATPTPRIKAELTS
SAPACYALAISPDNKVCFSCCSDGNIVVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLW
TGGLDNTVRCWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVSKPDKY
QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGSSIFQSKESSSVLSCDISPDDQ
FIVTGSGDKKATVYEVIY
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatctcaaatatatatattgtttaaatacaaagcgggcttcaattgcatggct
acacgaatgaacgaactgagtagaaaatgtccacgcatgagaggaagaagatttttttta
gagaattcggcgcccagaatgtttcctcaaaaccgacctccggcacctctccagccaccc
cctgggtcttcagcgtctgcggcggcagctgcagcctcgggagccccccaggccctaaag
ctcacctacccagagaccctggaccgcatcaaggaggagtttcagttcctccagacccag
taccacagcctgaagatggagtgtgagaaactggccacagagaagactgagatccagaga
cactatgttatgtattacgagatgtcctacggccttaatattgaaatgcacaaacagacg
gagatcgccaagcgcctgaatgtgatctgtgcccaactcatccctttcctgtcacaggag
caccaacaacaggtggtccaggccatggagcgcgccaagcaggtgactatgggggagtta
aatgcatcgatagggcaacagctgcaggcgcagcacctctcccagcacgtggcccagggt
ttgcagggtctgcacagtatgcaaatggggccccatcccgggggcctccctcaccctggc
ctggcactgggaggagggtccagcctcttggctctgtctggggccctgggggcccagctg
gctgccaaggagggccacgagagggcccacctggaggctgccgctgctgcagccgccgca
gagcaccacagaggctggctgcggggacgcggggcgatgctgcccatcatggacgtagac
cgtgaagcgggaccgagctctatgtccaacggggataagggccgtacagcagactacctc
agcaacgggaagaagaggagggcagacgagaaggagttcatgacggactatggcagcgat
gcggataagagtgatgataatttggtggtggatgaggacccctcgtccccccgcagtgtc
cactcctactcgtctcgagaaaacggcctggacaagttgcccccgtctcgtaaagacgcc
cctccccaggccagccctgcgtccctggcctcctccagcagccaagcctccccctcccgc
agcaaggaccgggagccaccgagggagaagtccagtaccccaggtatgaagccaggcacc
ccccacggttcccaggactcctccacccccggtcccagtgcacccccacagttccggccc
gtccctggcaaacctggcgttgaccctctgggtaaaaccaagaacatcatggatcacatg
tctctgggtctgaggaaccctctggcggtgcagggagcgtatccccccggggcatttagc
ctgccccctccaggagtgaacggggagctggcaggggcagcggcagcctatggggcgggg
ctccatctggtctccccccagatgaacggctctgcagctgccgcagctgcagccggatat
ggacgatcaccagtggtgggctatgagtctcctcacccccacatgagggtaccagggtta
cccgccagcctgcagtccactgcctcagggaaacctgcctactctttccatgtaagtgcg
gatggacagatgcagccggtgcctttccctccagacgccctgctgggcccgggcatcccg
cggcacgcccggcagatccacactctgaaccatggagaggtggtgtgtgccgttaccatc
agcacctccacacgccacgtctacaccggcggcaaggggtgtgtcaaggtgtgggacatc
agccagcctggcagcaagagtgccatggcccagctcgactgtctgaatagggataactac
atccgctcctgcaaactcctccctgatggccggaccctcatcgttggaggcgaggccagc
acactgtcaatctgggacttggccacacccactccccgcatcaaggcggagttgacgtct
tctgccccggcctgctacgctctggccatttcccccgacaacaaggtctgcttctcctgc
tgcagcgacggaaacattgtagtctgggacctgcacaaccagaccctggttaggcagttc
cagggccacactgacggggccagctgtattgacatctccaacgatgggaccaaactgtgg
acgggggggctggacaacacagtacgctgctgggacctgagagagggacgacagctgcag
cagcacgacttcacctcacagatcttttctttgggctactgtcctacaggagagtggctg
gcagtgggcatggagagcagtaatgtagaagtgctgcatgtctccaaaccagacaagtac
cagctgcacctccatgagagctgtgtgctctccctcaagtttgcctactgtggtaaatgg
tttgtgagcacaggcaaagataaccttctgaacgcatggcggacaccctatggatcaagc
atattccaatcaaaggagtcgtcttctgtgctcagctgtgacatctcccctgatgaccag
ttcattgtgacaggctcgggtgacaagaaggccactgtgtacgaagtcatctactga
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integrated database retrieval system
