Oncorhynchus nerka (sockeye salmon): 115144921
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Entry
115144921 CDS
T07952
Name
(RefSeq) AP-3 complex subunit delta-1-like isoform X1
KO
K12396
AP-3 complex subunit delta
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
115144921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115144921
Membrane trafficking [BR:
one04131
]
Endosome - Lysosome transport
Others
AP-3 complex
115144921
Endosome - Golgi transport
115144921
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3D1
Cnd1
HEAT
INTS1_R4
HEAT_2
PDS5
RTP1_C1
RasGEF_N_2
TOR1L1_N
Vac14_Fab1_bd
gpW
Motif
Other DBs
NCBI-GeneID:
115144921
NCBI-ProteinID:
XP_029541923
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All DBs
Position
LG17:complement(11132278..11173903)
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AA seq
1246 aa
AA seq
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MALKIVKGSIDRMFDKNLQDLVRGIRNHKEDEAKYISTCIDEIKQELKQDNIAVKSNAVC
KLTYLQMLGYDVSWAAFNIVEVMSSSKFTYKRIGYLAASQCFHESTDVIMLTTNQIRKDL
SSPNQYDTGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPES
LRPAFPRMKEKLEDPDPGVQSAAVNVICELARRNPKNYLSLAPLFFKLMTSSTNNWVLIK
IIKLFGALTPLEPRLGKKLIEPLTNLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHSAS
IQLCVQKLRILIEDSDQNLKYLGLLAMSKILKTHPKSVQSHKDLILQCLDDKDESIRLRA
LDLLYGMVSKKNLMEIVKKLMLHVDKAEGTTYRDELLTKIIDICSQSNYQYITNFEWYIS
ILVELTRLEGTRHGHLIASQMLDVAIRVKAIRAFAVAQMATLLDNAHLLTGNTQHSGICE
VLYAAAWICGEFSEHLEDPMATLEAMLRPKVATLPGHIQAVYVQNAAKLFSTVLCGQEGA
PADSKVAQETSQLLIDRLPVFVQSDNLEVQERASCILQLVKYIQKLQQKDVEVAEEVTAL
FAGELNPVAPKAQKKVPVPEGLDLDAWINEPPSGSESEDEGRKTKGKAVFAKEESRHTKP
RYTEVDEKELAKRREVRKAEQANNPFYIKASPSSQKVYQEAVGVEHIPVVQIDLSVPLKV
PGMPMSDQYVKLEEERREKNKTDRKKKDKKKRREKGRQRRGDSGPESEEDITPAHMVDIV
TEEMPENALPSDDDDKDPNDPHKALNIDLDKPLADSEKKLPVRTHRPDEVLKSPIEDAEG
LEVTSEPKKKSRKEKKDKESKKDKEKKKKKHKQEEGEDLMEAGSEEPVQSKVTNDVAAQP
PASTPEASDLDFWLSNAPVPSDPQEAAAVTDAPPASTPDAASGVAAVVPDSEPEETKSSK
HKKKKQKREKDKKKKHHHHHHHSDGAREESVQNGTVEDEEPLPPMSNYALLAENSYIKMM
KQDADEVCDIQGNLHDGSQVVVSVIFENKCDSFIKSMEFNVMDSLNSKLQRPEGAGPHDS
LTVPFHLPPGISNEARFIFSVQSIVMPQKLKGTLTFIVKTEDSSTHEKLDFKLHFTCTSY
LITTPCYSDAYAKLLESGDLKGSSLKLEGINQPFHHLLARICFHHHFSVVERIDSCASMY
SRSIQGHHVCLLVKTADQTVSIDAKCDEPGLLRNVLDEIKLTFSQC
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgaagattgttaaagggagcatcgatcggatgttcgataaaaaccttcaagat
ttagtacgtggcattaggaatcacaaggaagatgaggctaaatacatctccacctgcatc
gacgagatcaagcaggagctcaagcaggacaatattgctgtcaagtccaatgccgtctgc
aagctcacctacttgcagatgctgggctatgacgtcagctgggctgcattcaacattgtg
gaagtcatgagctcctccaaattcacatacaagagaattggttacctggccgcctcccag
tgctttcatgagagcactgatgtaatcatgctgacaaccaatcagatccgaaaggatctg
agcagtcctaaccagtatgacaccggcgtggctctcactggcctctcctgcttcgtgacc
cctgacctggctcgggatctggccaatgacatcatgactctgatgtcccacacaaagcct
tatatcaggaagaaggcagtcctgatcatgtacaaggtgttcctgaagtaccccgagtct
ctgcgaccagctttccccaggatgaaggagaaactggaagatcctgaccctggggtccag
tcagcggctgttaatgtcatctgtgagctggccaggaggaaccctaagaactacctttct
ctggccccgcttttcttcaagctcatgacctcatccaccaacaactgggtcctcatcaag
ataatcaagctgtttggtgccctcacacccctggagcctcgcttggggaagaagctgata
gaacccttaacaaacctcatccacagtacctctgctatgtcacttctatatgaatgtgtc
aacactgtgatagcagtgttgatttccctgtcctctgggatgccaaatcacagtgctagt
attcagctctgtgtccagaaactgagaatcctgattgaagactcggaccagaacttgaag
tacctgggcctgctggccatgtccaagatactgaagactcatcccaagtctgtccagtcc
cacaaggacctcatcctccaatgtctggatgacaaggacgagtccatccgcctgagggct
ctagacctgctctacggcatggtgtccaagaagaacctgatggagatagtgaagaagctg
atgctgcacgtggacaaagccgagggaaccacttacagagatgagctgctcaccaagatc
attgacatctgcagccagagcaactaccagtacatcaccaactttgaatggtacatcagt
atcctggtggagctgactcgtctagagggcacgcggcacggccacctcatcgcctcccag
atgctggacgttgccatccgggtgaaagccatccgagccttcgccgtggcccagatggct
actctgctggacaacgcccacctgctgaccggcaacacacagcacagcggcatctgtgag
gtgctctacgccgccgcctggatctgtggagagttctcagaacacctggaggaccccatg
gcgactctggaggccatgctgcgtcccaaggtggccaccctgccgggccacatccaggcc
gtgtacgtgcagaacgctgccaagctgttttctacggtgctgtgcggccaggagggggca
ccagcggacagcaaggtggcccaggagaccagccagctgctcattgacaggctgcctgtg
tttgtccagagtgacaacctggaggtgcaggagagggcctcctgcatcctgcaactggtg
aagtacatccagaagctgcagcagaaggacgtggaggtggctgaggaggtgacagctctg
tttgctggagagctcaaccctgtggcccccaaggcacagaagaaagtgcctgttcctgaa
ggtctggacctggatgcgtggatcaatgagcctccgtctgggagtgagtctgaggatgag
ggtaggaagaccaagggcaaggctgtgtttgccaaggaggagtccagacacaccaagcca
cgctacactgaagtggacgagaaggaattggctaagaggagagaagtaaggaaggcagag
caggccaacaaccccttctacatcaaggcctccccgtcctctcagaaggtataccaggag
gctgttggtgtggagcacattccagtggtgcagattgacctcagtgtgcctctcaaagtc
ccagggatgccaatgtcagaccaatatgtgaagctggaagaggagcgtcgggagaaaaac
aagacagacaggaagaagaaggacaagaagaagaggagggagaagggccggcagaggagg
ggggactcgggcccagagagtgaggaggacatcacccctgcacacatggtggacatcgtc
actgaagaaatgccagagaatgccttgcccagtgatgacgatgacaaagatcccaacgac
ccccacaaagctttgaacatcgacctggacaagcccctggcagacagcgagaagaagctg
ccagttaggacacaccgtcccgatgaggtcctcaagagccccatagaggacgcggagggg
ttggaggtcacttcagagcccaagaagaagagcaggaaggaaaagaaggacaaggagagt
aagaaggataaagagaagaagaagaagaaacacaaacaagaggaaggggaggatcttatg
gaggctgggtcagaggagcctgtccaatcaaaagtgaccaacgatgtggcagcccagcct
cctgcctccacaccagaggcttcggatctggatttctggctctcaaatgctccagtgccc
tctgaccctcaggaggccgcagcagtaacagacgctccccctgcctccactcctgacgct
gcgtctggtgtggctgccgtggtcccagactctgagcctgaagagactaaatcctccaag
cacaagaagaagaagcagaaaagggagaaggacaagaaaaagaagcaccaccatcatcat
caccatagcgatggagccagagaggagtctgtgcagaacggcacggtggaggacgaggag
cctctgccacccatgtccaattacgccctgctggctgagaactcctacatcaagatgatg
aagcaggatgctgatgaggtgtgtgacatccaggggaacctgcatgacggtagccaggtg
gtggtctctgtcatctttgaaaataagtgtgacagtttcatcaagtccatggagttcaat
gtgatggactctctcaactccaagctgcagcggcctgagggagccggcccacatgacagc
ctcaccgtgcccttccatctgccccccgggatctctaacgaggcacggttcatcttctca
gtgcagagcattgtgatgcctcagaaactgaagggaaccctcaccttcatagtcaagact
gaggattcctccactcacgagaaactagactttaaactgcactttacctgcacctcatac
ctgatcaccactccctgctacagtgacgcgtatgctaagctgttggagtcaggggacctc
aagggaagctctctgaagctggagggaatcaaccagcctttccaccatctactggctagg
atctgcttccaccaccacttctctgtggtggagaggattgattcctgtgcctccatgtac
agcaggtcaatccagggtcaccatgtgtgtctgctggtcaaaactgctgatcagaccgtg
tctatcgatgctaaatgtgacgagccggggctgcttaggaatgtgctggatgagatcaag
ctgaccttctctcaatgctga
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integrated database retrieval system
