Oncorhynchus nerka (sockeye salmon): 115144941
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Entry
115144941 CDS
T07952
Name
(RefSeq) procollagen galactosyltransferase 2-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00310
Lysine degradation
one00514
Other types of O-glycan biosynthesis
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
115144941
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
115144941
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
one01003
]
115144941
Enzymes [BR:
one01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
115144941
Glycosyltransferases [BR:
one01003
]
O-Glycan biosynthesis
O-linked Gal type
115144941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
115144941
NCBI-ProteinID:
XP_029541957
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Position
LG17:complement(11717134..11747208)
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AA seq
622 aa
AA seq
DB search
MMLGMMPAVGAVGVGLFCALLVAFMPGGMSDIATLVQDPVRPESSLLKPKIMIAILARNA
AHSLPHYLGCIDRLDYPKERIAIWAATDHSVDNSTAMLREWLKQAQDQYHYVEWRPMEQP
KSYTDEWGPKHWPPSRFNHVMKLRQAALKAARERWADYILFADSDNLLTNPRILNLLMAE
NLTLVAPMLESRSLYSNFWCGITPQGYYKRTPDYQPIREWKRLGCFAVPMVHSTFLLDLR
RDASQELAFYPPHPDYSWAFDDIMVFSFSARQADVQMYVCNREHYGFLPVPLKASQNVDE
EKESFTHTIAEAMIDHNIAPSEYLYNPQMPQDKMGFDEIFLINLKRRLDRRQRMLSTMTS
LGLQATLTDAVDGKALNTSQLQALGIEMIPGYQDPYSGRVLTRGEIGCFLSHHSTWVQLV
ERGLSKVLVLEDDVRFEPRFKRRMMTIMEEVEKAQLDWDLIYVGRKRMQVRQPERSVEGV
NNLVEADYSYWTLGYALSAQGARKLLAAQAFSKMLPVDEFLPVMFNKHPNSDFMSHFEPR
DLKAFSVEPLLLYPTHYTGEPGYVSDTETSTIWDDEATATDWDRQHQHARKTEQQGRIHT
VAQNSVTGDSPPPAARSTRDEL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgggaatgatgcctgcggttggagccgtgggagtcgggctgttctgcgctcta
cttgtcgccttcatgcccggtggcatgtcagacatagcgactctggtgcaggacccggtc
cgacccgaatcgtccctgctgaagccaaaaatcatgatcgccattctggctcgcaacgcg
gcgcacagcctgccgcactacctgggctgcatcgacaggctagactacccgaaggagcgg
atcgctatatgggcagcgacagaccacagtgtggacaacagcacagccatgctgagggag
tggctgaagcaggcccaggaccagtaccactatgtggagtggagacccatggagcagccc
aagtcctatactgatgagtgggggcccaagcactggcctccgtcccgcttcaaccatgtg
atgaagctgaggcaggctgctctgaaggcagcacgggaacgctgggcagattatatactg
tttgcagacagtgataacctgctgaccaaccccaggatcctgaacctactcatggctgag
aacctgactctggtggcccccatgctggagtctcgctctctctactccaacttctggtgt
ggcatcactccccagggttactataagcgtactccagactaccagccaatcagggagtgg
aagcgtctgggttgcttcgccgtacccatggtgcactctaccttcctgttagacctgagg
cgtgacgccagtcaggagctggccttctacccccctcaccctgactacagctgggccttc
gatgacatcatggtattctccttctccgcccgacaggcagatgtccagatgtatgtgtgt
aacagagaacactatggcttcctgccggttcctctgaaggcctcacagaatgttgacgag
gagaaggagagcttcacacacactatcgctgaggccatgattgaccacaacatagcgccc
tcagagtacttgtacaatccccagatgccgcaggacaagatgggctttgatgagatcttc
ctgatcaatctgaaacgtcgtctggacaggagacagagaatgttgagcaccatgacctct
ctgggtctgcaggccacccttactgacgcagtggatggcaaggctctgaacacttctcaa
ctgcaggcgttgggtatagagatgattccaggttatcaggacccatactctggccgtgtt
ctaaccagaggagagataggctgcttcctcagccaccactccacctgggtacagttggtg
gagcgtggtctttccaaggtgctggtgttggaggatgatgtgaggtttgagcccagattt
aagaggcgaatgatgaccatcatggaggaagtagagaaggcccagctggactgggatctc
atctatgtggggcgtaagcgtatgcaagtgcgtcagccggagcgttcagtggaaggggtt
aataacctggtggaggcggactactcgtattggacgctgggctatgctctgtcagcgcag
ggtgccaggaagctgctggctgctcaggccttcagcaagatgctacctgtcgatgagttc
ctccctgtcatgttcaacaaacaccccaattctgacttcatgtctcactttgagcctcgg
gacctgaaggccttctccgtggaacccctcctcctctaccccacccactacacgggcgag
ccaggctacgtcagcgacacagagacctccaccatctgggacgacgaggccaccgccacc
gactgggaccgccagcaccagcatgccaggaagacagaacagcaaggccgcatccacacc
gtggcccagaacagtgtgacgggtgactcacctccacccgctgctcgctccacacgagac
gaactctga
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