Oncorhynchus nerka (sockeye salmon): 115144951
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Entry
115144951 CDS
T07952
Name
(RefSeq) DNA-binding protein RFX2-like isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115144951
Transcription factors [BR:
one03000
]
Eukaryotic type
Other basic domains
RF-X
115144951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
ThermoDBP-RP_arch
Pox_D5
Motif
Other DBs
NCBI-GeneID:
115144951
NCBI-ProteinID:
XP_029541974
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Position
LG17:complement(12298043..12360373)
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AA seq
732 aa
AA seq
DB search
MQSSDGGSDSPSSVVLRTSTSTQAPVVQPVPASQQRVLVQATGSAQKGAQVQQLSVPRVQ
QVPQQVQQVQHVYPSQVQYVGEGGEAVYTNGTIRTAYSYNPEAQLYGQGSGGAYFDSQGG
GAQVTTVVSSAGGGPPHGMVGIAMDVGSSQVISGGGTYLIHGGGMDGGRHHASHSSRSSS
AMLEMAIENLQKSEGIATHKSSLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEQK
LDPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGIRLKPDSPLNRLQEDSQYMAMRQ
QPMHQKQRFKPLQKVDGMGDSLSGGSQHPASTPEQSVAAQSQHHQQYIDVSHVLPPFPTP
DLGTQPLPERINMNDVKKLQNLYRDHCEATLDVVMNLQFHYIEKLWQTFWYSTAPSSDVT
TTIPNSDEDMEGVIPREKLMALCKYEPVKLWMRSCDHILYQALVEILIPDVLRPVPSTLT
QAIRNFAKSLEGWLTTAMSDFPNEIVRTKAAVVSAFAQTLRRYTSLNHLAQAARAVLQNT
SQINQMLSDLNRVDFANVQEQASWVCQCDETVVQRLEQDFKVTLQQQSSLDQWAAWLDNV
VNQVLKPHEGSTSFPRAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFY
LVEHRVAQATGETPIAVMGEFSDLNSMLPMLMDKDPSFSDDMSDMGSDEGRGPNEPTVKR
ERIEINHSLQEI
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcagagttcagatggagggtccgattcgccgtccagtgtggtgctgcgtacgtccacc
tccacccaggcccccgtggtgcagcccgtcccagcctcacaacagagggtgctggttcag
gccacaggttcggcccagaagggagcgcaggtgcagcagctgtcagtccctcgggtgcaa
caggtccctcagcaggttcagcaggtccagcatgtgtacccctcccaggttcaatatgta
ggagaggggggagaggcagtttacactaatggaaccatccggacagcctactcctataac
cctgaggcccagctgtatgggcaaggtagtggaggagcctactttgactctcagggtggg
ggtgcccaggtcaccacggtggtctcctcggccggcggcgggccgccccacggtatggtg
ggcatcgccatggatgtgggcagtagtcaggtcatctccggtggcggcacctatctgatc
cacggcgggggcatggatgggggtcgccaccatgcctcacactcttcccgctcctcctct
gctatgcttgaaatggcgattgaaaacctccaaaagtctgaagggattgcaactcacaaa
agcagcctgctcaacagccatctgcagtggctgctggataactatgagacagcggagggg
gtgagcctgccccggagctccctctacaaccactacctgcgccattgtcaggagcagaaa
ctggaccctgtcaacgctgcctcctttgggaaactcatccgctccgtcttcatgggcctc
aggacccgccgcctcggcactaggggcaactccaagtaccactactatggcatcagactg
aagccagactcaccactcaacagactgcaagaggactctcagtacatggccatgagacag
caacccatgcaccagaaacagaggttcaagcccctccagaaggtggatggcatgggagac
agcctgtcaggaggctcccagcacccagccagcaccccagagcagtctgtggcagcccag
agccagcaccaccagcagtacattgatgtgtcacatgtcctgcccccgttccccacccct
gacctgggcacccagcccctccctgagcgtatcaacatgaatgacgtgaagaagctgcag
aacctgtacagggaccactgtgaggctactctggatgtggtgatgaacctccagttccac
tacattgagaagctgtggcagaccttctggtattcaacagcgccatctagtgacgtaacc
accaccatccccaacagtgatgaggacatggagggggtgatccccagggagaagctgatg
gctctgtgcaagtatgagcctgtcaagctgtggatgaggagctgtgaccatatcctgtac
caggccctggtggagatcctcatccctgacgtgctacgccctgtccccagtactctcact
caggccattcgcaactttgccaagagtctggagggttggctgaccacagccatgagcgac
tttcccaatgagattgtacgcaccaaggcagcggtggtgagtgcatttgctcagaccttg
cgtcggtacacctctctgaaccacctggcccaggcggcccgcgctgtgctgcagaacacc
tcccagatcaatcagatgctcagcgacctcaaccgcgtcgacttcgccaacgtacaggag
caggcgtcgtgggtatgccagtgtgacgagactgtggtccagcggctggagcaggacttc
aaggtgaccttgcagcagcagagctctctggaccagtgggccgcctggctggacaacgtg
gtcaaccaggtcctcaagccccacgagggcagcaccagcttccccagggctgcaagacag
ttcctgctgaagtggtccttctacagctccatggtgatcagggacctgaccctgcgtagt
gccgctagtttcggctccttccatctcatcaggctgctctacgacgagtacatgttctac
ctggtggagcaccgcgtcgcccaggcaaccggagagacgcccatcgctgtcatgggagag
ttcagtgacctaaactcaatgttgcccatgctcatggataaagacccgtccttctcagac
gacatgagtgacatgggcagtgacgagggccgggggcccaacgaaccgaccgtgaaaagg
gagaggatcgaaatcaaccactcgctgcaggagatctga
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