Oncorhynchus nerka (sockeye salmon): 115144956
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Entry
115144956 CDS
T07952
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 10-like
KO
K08625
a disintegrin and metalloproteinase with thrombospondin motifs 10 [EC:3.4.24.-]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
one01002
]
115144956
Peptidases and inhibitors [BR:
one01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
115144956
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Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
Reprolysin
Pep_M12B_propep
ADAMTS_CR_2
TSP_1
Reprolysin_5
Reprolysin_3
PLAC
Reprolysin_2
ADAMTS_CR_3
TSP1_spondin
Reprolysin_4
TSP1_CCN
DUF4953
Peptidase_M57
Motif
Other DBs
NCBI-GeneID:
115144956
NCBI-ProteinID:
XP_029541985
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Position
LG17:complement(12490113..12543450)
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AA seq
1118 aa
AA seq
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MEMLWRTLACIVVIIVMVATEVAESQTAEKFTQSQATFLSSLGQYEIVIPVRVGPQGETL
DTEDGGADSPNHHRRSHRSAEDQQQDLSQLYYQLSTTKTNFFLNLTLQGGLLSHQFRVEY
WRRGRLAWSHPYAPQCLYVGHLQGQPHSSMVALSNCNGLQGVIVAGGEEYLVEPLTPAEN
LTRAERGKGRPHVVYKRSSLRHQYMDQSCGVIDEKPGKGMAWWQRTLKTPPNPISRGQLP
LKRSVSRERYVETLVVADKMMVGYHGRRDIEQYILAVMNIVAKLFQDSSLGNAVNIVVTR
LILLMEDQPTLEINHHAGKSLDSFCKWQKSIQNRNGNGNAIPDNGIAHHDTAVLITRYDI
CIYKNKPCGTLGLAPVGGMCEPERSCSINEDIGLATAFTIAHEIGHTFGMNHDGVGNGCG
SRSQETAKLMAAHITMKTNPFVWSACSRDYITNFLDSGMGSCLNNVPPKQDFLYPTTAPG
QAYDADEQCRFQYGVKSRQCKYGEVCSELWCMSKSNRCITSSIPAAEGTICQTNTIEKGW
CYKRVCVVYGTRPEGVDGGWGLWTPWEECSRTCGGGVSSSIRHCDSPRPTIGGKYCLGER
KRFRSCNIDECPAGSQDFREIQCSDFDNVTFRGKFYTWKPYRGGGVKFCSLNCLAEGYNF
YTERAPAVVDGTPCRDDSLDVCVNGECKHVGCDRILSSDVREDRCRMCGGDGSSCEAIEG
LFNDSLPEGGYEEVVRIPKGSVFIHIQELNVSLNFLVLKSKGEQFFINGKLTIDTPRRFD
IAGTTFHYRRPTDQPETLEALGPTNMTIIVMVLVREENPGIHYRFNPPVSRNLLSGYAWH
YTSWSRCSALCAGGGQTQQVVCKKQMDHTVVYNHFCDKKSKPKDKKRACNSEPCSPSWWS
GVWSECSRSCNGGLRTREVLCKRKISPTEEKVQDDSACTPPRPPLTEPCSNHTCPPEWLA
LDWSECNPSCGPGFRHRVLLCKRGESGDILPESQCPKHGRPTTRVRCNLQRCPPPMWVTG
PWGECSARCGLGQEKRSVQCLAQTGQPSNECPDLQRPAAMQQCKSKCDLSSLPLDIPEGD
PEECKDVNTVAYCPLVLRFKFCSRPYFRQMCCKTCQGH
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgctatggaggaccttggcctgcattgttgtcatcatcgtcatggttgccacc
gaggtcgcagaaagtcagactgctgaaaagttcacccagtcacaagctacgttcctgtcc
agcctgggccagtatgaaattgtcatcccggttcgtgtggggccgcagggcgagaccctg
gacacagaggatggaggtgcagacagccccaaccaccaccggcggagccaccgcagtgct
gaggaccagcaacaggacctgtcccagctgtactaccaactctccaccaccaaaactaac
ttcttcctcaacttgaccctgcaggggggcctgctgtcccaccagttccgtgtggagtac
tggaggaggggccgtctggcctggagccacccttatgccccccagtgtctctatgtaggc
cacctgcagggtcagccccactccagcatggtggctctcagcaactgtaatggcctgcag
ggggtgatcgtggcgggtggtgaagagtacctcgtcgagcctctgaccccggccgaaaac
ctcactagggcggagagggggaagggccgcccccatgtggtttacaagaggtcatctctt
cgccaccagtacatggaccagtcctgtggtgtcatcgatgagaagccaggtaaaggcatg
gcctggtggcagaggactctgaagactcctcccaatcccatcagccgaggccagctgccc
ctgaagaggtctgtgagcagagagcgctacgtagaaacactggtggtggccgacaagatg
atggtggggtaccacggccgccgggacatcgagcagtacatcctggctgtcatgaatatt
gttgccaaactgttccaggattctagcctggggaacgcagtgaacatcgtggtgacccgc
ctcatcctgctcatggaggaccagccgactctagagatcaaccaccatgcagggaagtcc
ctggacagcttctgtaagtggcagaaatccatccagaaccggaatggcaacgggaatgcc
atcccagacaacggcatcgctcaccacgacactgctgtgctcatcaccaggtacgacatc
tgcatctacaagaacaagccatgtggaaccctaggtctagcaccagtgggagggatgtgt
gagccagagaggagctgcagcatcaacgaggacattggcctggccacagccttcaccatc
gcccatgaaataggacacacgtttgggatgaaccatgacggagttggcaacggctgtggc
tcccgtagtcaggagacagccaagctgatggctgcacatatcaccatgaagaccaaccct
ttcgtctggtccgcctgcagccgagactacatcaccaacttcctggactcaggcatgggt
tcctgcctcaacaacgtcccccccaagcaggattttttgtaccccactacggcccccggc
caggcctacgatgcagatgagcagtgccgcttccaatatggagtgaagtctcggcagtgt
aaatatggggaagtctgcagtgagctgtggtgcatgagcaagagcaaccgctgcatcacc
agcagcatacccgccgccgaaggaaccatctgtcaaaccaataccatagagaaagggtgg
tgctataagagagtgtgtgtggtctacgggacgaggccagagggggtggacggcggctgg
ggtctctggactccctgggaagagtgcagccgtacctgtgggggaggagtgtcctcctcc
atccgccattgtgacagccctaggccaaccattggtggaaagtattgtctgggagagagg
aagcgcttcagatcgtgcaatattgatgagtgccctgcaggctctcaggatttccgggag
attcagtgctccgacttcgacaacgttactttccgggggaaattctacacctggaaaccc
tacaggggaggtggagtgaagttctgctctctgaactgcctggcggagggatataacttc
tacacagagcgtgctccggctgtggtggacgggacgccatgtcgggacgactctctggat
gtctgtgtgaacggagagtgcaagcacgtgggctgtgaccggatcctgagctcggacgtg
cgcgaggaccgctgccggatgtgcgggggtgacgggagcagctgtgaggccatcgagggc
ctcttcaatgactccctgcctgaaggaggttatgaagaggtggtcagaatccccaaagga
tccgtgttcattcatatccaggagctcaacgtctccctcaacttcctagtgctgaagagt
aaaggagaacagttctttatcaatgggaagctgaccatcgacacccctcgtaggttcgac
atcgcagggaccaccttccactaccgccggcccactgaccaacctgagaccctggaggcc
ctggggcccaccaacatgaccatcatcgtcatggtactggtgagggaagagaacccaggg
atccactaccgcttcaaccctccagtcagcagaaatcttttgagtggatatgcctggcac
tacacatcctggtcccgctgctctgcactctgcgctgggggtggtcagacccagcaggtc
gtgtgtaagaagcagatggatcacaccgtggtctacaaccacttctgtgacaagaagagc
aaacccaaagacaagaagcgagcctgcaactctgagccatgctccccaagctggtggtct
ggggtgtggtctgagtgcagtcgcagctgtaacgggggcttgaggaccagagaggtgttg
tgtaagaggaagatctctcctacagaggagaaggtccaggacgacagtgcctgtactcct
ccacgaccacctctcactgaaccctgcagcaaccacacctgcccccccgagtggctggcc
ctggactggtcagagtgtaatcccagttgtggtccagggttcaggcaccgtgtccttctg
tgtaagcgtggggagagtggagacatactgccagagtcccagtgtcccaagcatgggcgt
cccaccaccagggtgcgctgtaacctgcagcgctgcccaccacccatgtgggtcacaggg
ccctggggagagtgctcggccaggtgtggtctgggtcaggagaagcgctctgtgcagtgt
ctcgcacaaaccggccagccgtccaatgagtgcccagacctccagcgcccggcagccatg
caacagtgcaagagcaaatgtgacctcagtagcctacccttggacatccccgagggtgac
cctgaagagtgcaaagatgtgaacacagtggcgtactgccccctggtgctcaggtttaag
ttctgcagccgcccctacttcagacagatgtgctgtaagacctgccaaggacactga
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