Oncorhynchus nerka (sockeye salmon): 115144990
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Entry
115144990 CDS
T07952
Name
(RefSeq) transcription factor Sox-2-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115144990
Transcription factors [BR:
one03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
115144990
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
115144990
NCBI-ProteinID:
XP_029542036
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All DBs
Position
LG17:13803407..13805418
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AA seq
315 aa
AA seq
DB search
MYNMMETELKPTAPQTNSGVTGNSNASGNNQKNSPDRVKRPMNAFMVWSRGQRRKMAQEN
PKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKD
KYTLPGGLLAPGGNAMGAGVGVGGGLGGGVNQRMDSYAHMNGWTNGGYGMMQEQLGYGQH
PGLNAHNTAQMQQMHRYDMSALQYNSMTNSQTYMNGSPTYSMSYSQQSTPGMTLGSMGSV
VKSESSCSPPIVTSSSHSRGAPCQTGDLRDMISMYLPGAEVPEQSAQSRLHMSQHYQSAP
VPGTTINGTLPLSHM
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggaaactgaactgaaaccaaccgcaccccagacaaattctggggtt
accgggaattcaaatgcatctggaaacaaccagaaaaacagtccggaccgagtcaagaga
cccatgaatgccttcatggtttggtcgaggggacaacgaagaaagatggcacaggaaaac
cccaaaatgcacaattcggaaataagcaaaagacttggggccgagtggaagcttctatcc
gagagcgaaaagcgacctttcattgacgaagcgaagcgtctccgggctctccacatgaag
gaacatccggattacaaatacagaccccggaggaaaaccaagaccctgatgaagaaggac
aagtatactctgccaggtggacttcttgcgccaggcggcaatgccatgggcgctggagtg
ggtgtagggggaggcttgggcggtggggttaatcaaaggatggacagttacgcacatatg
aacggctggaccaatggaggttatggcatgatgcaggagcagcttggttatgggcagcac
cctggtttaaacgctcacaacaccgcgcagatgcagcaaatgcaccgctatgacatgagc
gcacttcagtacaactccatgacaaactcccagacctacatgaacggatcacccacgtat
agcatgtcatactcacagcagagcactcctggaatgactctgggctccatgggttcggtg
gtcaagtcagagtccagttgcagtccccccatagtcacgtcttcgtctcactcaaggggt
gctccgtgtcagactggagacctacgggacatgatcagtatgtacttaccgggtgctgag
gtgccggaacaaagtgcccaaagcagactccatatgtcccaacattaccagagcgcacct
gtaccaggcacgacgattaatggcacactcccattatcacatatgtaa
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