Oncorhynchus nerka (sockeye salmon): 115144993
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Entry
115144993 CDS
T07952
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43-like
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
115144993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115144993
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115144993
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115144993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
ZNRF_3_ecto
zf-ANAPC11
FANCL_C
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
115144993
NCBI-ProteinID:
XP_029542038
LinkDB
All DBs
Position
LG17:complement(14210205..14229855)
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AA seq
716 aa
AA seq
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MQAEDAETLMELVNRNEEASVRIDIKREDPKWAHYDVVVLLTIVLAILAIVSIFAFRYRC
KSSRTWDSVHQQTMRAISRLETRMYSSQGCGGSQRHRGGWGSNSSSNSSPVCAICLDEFL
EGQDLRIISCAHEFHKECVDPWLLQHRTCPLCMHNIMGSELSGQPRRTRLQQTPEHSQGF
LHTHPIPFSMRPHYPRGPSGPYPSLGHYSGSPPLDPQTHRFLPSRPLGPGCGYLHPAEGP
GRPHRAGGSCKTAGHPMETHYGPGLRRSCHAYRSGCPSQRSASSSRLHHAPSSAPRASAG
GAHTWGNEGGSCSGGSYRTEHSGYLADGPASDSSSGPCHGSSSDSVLNCTDVSLQGVYGS
WSTFRSSLSSDYDPFVYCGPGPGPTGRRDSMEAGAQRPRSLDSVVNRDSMEAGAQRPRSL
DSVVNRDRGRGGGGRRGGCSEEQQQAVFSHVHYHRHRHHHYREEGEREHAQGQGPGRGSD
EELGATAFGRESGSPPALDKDSPVCPLKDSPCHCPKADHTDSRGAHGHGTEGQGHELSHP
SGPPPVLVTPAPLPPPPTCCHQDHSHGGHPHRRAGRLGDCVLDGPSVRFQQNLDLQDDCS
IHIHYDQGYCCPPPDLPPALLSMPVPLILDSGGMRPLGGLEDWPCCGGPHHVVWQKRVQQ
AHLEPHLLGVPMDITPPPSSRRHHGPHSPADDRNTDFCLYCQTLHNNQGSEEESGV
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctgaggatgctgagacgctgatggaactggtcaacaggaacgaggaggccagc
gtccgcatcgacatcaagagggaggacccaaaatgggcccactatgatgttgttgtcctg
ctcactatagtccttgctattctggccatcgtttcgatctttgctttccggtatcgatgc
aaatccagcagaacctgggactcagtccaccagcagacgatgcgagccatcagtcgtctg
gagacgcggatgtacagctctcagggctgcgggggctcacagcgccaccgtgggggctgg
gggtctaatagcagctctaactccagccccgtctgtgccatctgtctggatgagttcctg
gagggacaggacctgaggatcatctcgtgtgctcatgagttccataaggagtgtgtggac
ccctggctactgcagcaccgtacctgtcccctctgcatgcacaacatcatgggttcagag
ctgtctggacagccacggaggaccagactacagcagacccccgagcacagccagggtttc
ctccacacccaccccatccccttctccatgaggcctcactacccccgcggtccctctggt
ccatacccctccctgggccactatagcggctccccgcctctggacccccagactcaccgc
ttcctccctagccggcccctgggccctggttgcggatacctccaccctgcagagggcccc
ggaaggccccacagagccgggggcagctgcaagacagcaggccaccctatggagacccac
tacggccccgggctccgtcgctcctgccacgcctaccgctccggctgcccttcccagcgc
agcgcctccagttccaggctccaccacgccccctcctctgctccccgcgcctccgcaggg
ggagcccacacctgggggaacgaggggggcagctgctctggggggagctaccggacggag
cacagtggctacctggctgatgggccggccagtgactccagctctggcccctgtcacggc
tcctccagtgactcggtcctcaactgtactgacgtgtccctgcagggtgtgtatggtagc
tggtccacgttccgcagctccctgagcagtgactatgatccgtttgtgtactgcggaccg
ggaccgggaccgacaggccgcagagacagcatggaggcaggggcccagagacccaggtcc
ctggattcagtggtgaacagagacagcatggaggcaggggcccagagacccaggtccctg
gattcagtggtgaacagagacagaggacgaggaggaggaggaagaagaggagggtgctct
gaggaacagcagcaggctgtgtttagccacgtccactaccaccgccaccgtcaccaccac
taccgagaggaaggggagagggagcacgcccagggccaggggccaggcagggggtcggac
gaggagctgggggctactgcttttggccgtgagtcaggatctcccccggctctggacaaa
gattccccagtgtgccctctgaaagacagcccctgtcactgccctaaggcagaccacaca
gacagtaggggggcccatggccacgggacagagggtcagggccatgagctcagccacccc
tcaggcccccctccagtcctggtaaccccagcccccttaccacccccacccacctgctgt
caccaggaccacagccacgggggccacccccaccggagggcaggccggctgggcgactgt
gtgctcgacggcccctcagtgcgtttccaacagaacctggacctgcaggacgactgtagc
atccacatccactatgaccagggttactgctgcccccctcccgacctgccccccgctctg
ctctccatgcctgtgcccctcatcctggactctggaggaatgaggcccctcgggggccta
gaggactggccctgctgtggagggccccaccatgtggtgtggcagaagcgggtgcagcag
gcccaccttgagccccatctgctgggggtccctatggacataaccccacccccatccagc
aggcgccaccacggtccccacagcccagcggacgaccgcaacacagacttttgtttatac
tgccaaacattacacaacaatcagggatccgaggaggagtccggcgtgtga
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