Oncorhynchus nerka (sockeye salmon): 115145044
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Entry
115145044 CDS
T07952
Name
(RefSeq) methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial-like isoform X1
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00280
Valine, leucine and isoleucine degradation
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
115145044
Enzymes [BR:
one01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
115145044
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
ATPgrasp_ST
ATP-grasp_3
RimK
NQRA_N
MCCA_BT
RnfC_N
ATP-grasp_4
Leo1
Motif
Other DBs
NCBI-GeneID:
115145044
NCBI-ProteinID:
XP_029542133
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Position
LG17:17741219..17761186
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AA seq
716 aa
AA seq
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MFAVLKVQTLQGLRIFQQKCIWTKGSVRFASVGQGRIEKVLIANRGEIACRVMRTAKKMG
VRSVAVYSDADRHSMHVAMADEAYNIGPAASQQSYLSMEKVLEVAKTSGSHAVHPGYGFL
SENTEFAEACKQEGIIFIGPPSSAIRDMGIKSTSKYIMSAAGVPIIEGYHGDDQSDEKLQ
AEAVRIGYPVMIKAVRGGGGKGMRISHTAEDFHEQLESARREARKSFNDDVMLVEKFVED
PRHVEVQVFGDQHGNAVYLFERDCSVQRRHQKIIEEAPGPGISEEVRWKLGEAAVRAAKA
VNYVGAGTVEFIMDAQHNFYFMEMNTRLQVEHPVSEMITGTDLVEWQLRVAAGERLPLLQ
DEIKLMGHSFEARIYAEDPNNDFLPGAGPLLHLSTPPADEYTRIETGVREGDEVSAHYDP
MIAKLVVWGEDRSAALKKLRYGLRQYNIVGLNTNIDFLLSLSGHPEFEAGNVTTSFIPQH
YEQLFPKPIPPSRATLCQAALGLLLRERASTQTFRDKSNDPFSPFACSNGRRVNILYSRN
MTLQLGETSESEPPSPEVEVTVTYNSDGTYSMEIGGEVFQVSGEVETEGQTSFLHCSVNG
VKSRPKLVILDNTVHLFSMEGSAEVSVPVPKFLAGVSTGAQGGAVAPMTGTIEKVLVKAG
DTVQMGDALMVMNAMKMEHTIRAPKAGVIKKVFFKEGSQANRHAALVEFEEAAEEE
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctgtcctgaaagttcaaaccctacagggtctaagaatatttcaacagaaatgt
atatggaccaaaggatcagtacggtttgcctcagttgggcaaggcaggatagagaaagta
ctcattgccaacagaggagagattgcctgccgtgtgatgcgaacagcaaagaagatgggt
gtgcgctctgtggcagtatacagtgatgcagaccgtcattccatgcatgtggccatggca
gatgaggcctataacattgggccagctgcatcccagcagagttacttgtcaatggagaaa
gtcttggaggttgccaagacatctggatcacatgctgtccatccgggatatggcttcctg
tcagagaacacagagtttgctgaggcgtgcaaacaggagggtatcattttcattggtcct
ccatcatctgccatcagagacatgggtatcaaaagtacatcgaaatacattatgtcagct
gcgggtgttcctatcatcgagggttaccacggagacgaccaatcagatgagaagctccaa
gctgaggctgtcaggatcggctacccagtgatgataaaggctgtgcgtggcgggggtggt
aaaggaatgcgcatttcacacaccgctgaagatttccatgagcagcttgagtctgcgaga
cgagaggctcgcaagtccttcaacgatgacgtcatgctagtggagaaatttgtagaggac
cccagacatgtggaggtccaggtctttggggaccagcatggaaatgctgtctacctgttt
gagagggactgcagcgtgcagagaaggcaccagaagatcattgaggaagcaccagggcct
ggtataagcgaggaggtgaggtggaaactgggagaggcagcggtgagagcagccaaagcc
gtcaactatgtgggagcaggcactgtggagttcatcatggatgcacagcacaacttctac
ttcatggagatgaacacacgtctgcaggtggagcacccggtgtctgagatgatcactgga
actgacctggtggagtggcagctcagggtggctgcaggcgagaggctgcccctcctgcag
gacgagatcaaactgatgggccattcatttgaggccaggatatacgctgaggaccccaac
aatgacttcctccctggggcaggacccctccttcatctgtctacacccccggcagacgaa
tacacacgcatcgagacgggcgtcagggaaggagatgaagtgtcagcccactatgatccc
atgatcgctaaactggtggtgtggggagaagaccgatctgctgctctgaagaagctcaga
tacggtctacgccagtacaacattgtaggactcaacaccaacattgacttcttgctgagt
ctgtctgggcatccagagtttgaggcggggaatgtgaccaccagcttcatcccccagcac
tatgagcagctgttccctaaacccatccctccctccagggccacactgtgtcaggctgcc
ctgggcctgctcctcagagagagggccagcactcagaccttcagagacaagtccaacgat
cccttctctccttttgcctgcagtaacggccggagggtgaacatcctatacagtaggaat
atgaccctccagctgggtgaaactagtgagtccgaacctccttcaccagaagtggaagta
acggttacatacaattcagatgggacttattctatggagattggaggggaagtgttccag
gtgtcaggggaggtggagacagagggacagacatcattcctgcactgctctgtcaacggg
gtgaagtcccggcccaaactggtcatccttgataacacagtacacctcttctctatggag
ggcagcgcagaggtgagcgttccagtgcccaagttcctggctggtgtgagcacaggagca
cagggaggagctgtggcacccatgaccgggaccattgagaaggtgctggtgaaggcaggt
gacactgtgcaaatgggagatgccttgatggtgatgaatgccatgaaaatggagcacacc
atccgagcacctaaagctggagttatcaagaaggtgtttttcaaagagggctcccaggcc
aaccgacacgcagccctggttgagtttgaggaagccgctgaagaggaataa
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