Oncorhynchus nerka (sockeye salmon): 115145091
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Entry
115145091 CDS
T07952
Symbol
usp24
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24 isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
one01002
]
115145091 (usp24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115145091 (usp24)
Enzymes [BR:
one01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115145091 (usp24)
Peptidases and inhibitors [BR:
one01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
115145091 (usp24)
Ubiquitin system [BR:
one04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
115145091 (usp24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
UCH_UBL1
DUF3517
UBA
UBA_7
ubiquitin
Motif
Other DBs
NCBI-GeneID:
115145091
NCBI-ProteinID:
XP_029542207
LinkDB
All DBs
Position
LG17:19599019..19651966
Genome browser
AA seq
2620 aa
AA seq
DB search
METEEEQHMTTLLCMGFPDAVAIRKALRLAKNDINEAVALLTNESPGLGYGYEPMESGPA
PGPSGDGESSGRTGTGGFDPPPAYHDVVESERSNDENGNCSGSSMEFPTTNLYELENRVF
TDHWSIPYKREESLGKCLIAATCLAKHGLADADENCKQFMDRCMHEAFKKLLTSSAVHKW
GTEIHEGIYNMLMLLVELVAERVKRDPIPVGVMGVLTIAFNPDNEYHFKNRMKTCQRNWS
EVFGEEAMFAVSPSNSYQKEPHGWLVDLVNRFGEMGGFTAIQAKLNTQEIEIGCVSALVQ
PLSVCAEYLNSSLVQPMLDPVIHKMITYVQNLEEKDLKDKRLVSIPELLSAIKLLCMRFQ
TTLVTVVDDLRLDTLLRMLKTPHFSTKMNSLKEVTKLIEESTMSKTVKNAIDTDRLLDWL
VENSVLSIALEGNIDQAQYCDRIKGIIELLGSKLSLDELSKIWMIQAGQSSTVIENIHTI
MAAAAVKFNLDQLSHLFVLIQKSWEVESDRVRQKLLSLIGRIGREARSEATTGKVLEVLW
ELAHLPTLPTSLVQQASEEHLAILTDAYAVKETVKRCYIIKCIEDIKKTQTEEEGKTSDI
QSSFLTGSWGKKKAKENSLAKSSQQGSPQAVWVVPALRQLHEITRSFIKQTYQKQDKQSI
IQDLKKNFEIVKLITGSLVVCHRLAVSAAGSNGLAGHTLVDGRYTYQEYLDGHLRFLAFF
LQEASLYLVWNRAKELWDCLVSGPEVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILK
LEPYEITMNGFNLFKTFFENVNLCDHRLKRQGTQLCVERLDLSGMDFIWRIAMETPDEEI
ANEAIQLIITYSYTNLNPKMKKDSVSLHKKFIADCYKRLEAASSALGGPTLTHAVTRATK
MLTATAMPTVATSVQSPSRSTKLVIIERLLLLAERYVITIEDLYSVPRTILPHGASFNGH
PVSLHVTYESTKDTFTLEAHSNETVGSIRWKIAEHLSCPVDNVQIFANDSVLTMNRDQKL
LSQLGFSDEQSLTVKSSGTGTPSGGSSESSASASSSSSSAVFNSAYAMEQEKSLPGVVMA
LVCNVFEMLYQLANLDEPRTTLRVRKLLLLIPTDPEVQDALDNFVPKESSVWSHQKTLFT
LGQGSGSRSPSLGSKQQHQPSAASILESLFRSTAPGMSTFRVLYNLEVLSSKLMPTSDDE
MAKTSVKSFCENFLKAGGLSLVVNVMQRDSIPSEVDYETRQGVYSICLQLARFLLVGQSM
PSLLDDDVIREGDTLSSRPFRNAGRPGRQLSLCGTPEKSSYRQMSLSERSSIRVEEIIPA
ARVAIQTMEVGDFTSTLACFMRLTWAAAAGRLDLVGSPQPIRPEHSSLLPLGVRTRVSST
GSNCSSSSEGEAPPTALHAGICVKQQSVSIKDCIIAREALSLLVTCLQLRTQQLGSFYIL
PCVSDFIIDILLGSASGEIRRVACDQLYTLSQSDSSAFPEIVKPNVFLLRVVLASQLPLW
SPTSVMRGVNQRLLSQCTEYFDLRCQLLDDLTSSEMEVLSVSAVAMLEDEISWLDNFEPS
WSSEMETSEADNILQAGHLRLIKTLLSLCGTEKEQLGHSLIQQLLDDFLFRASRIILNTS
NPASSSPPSHDFFPKCSTASSRLAAYEVLVMLADSSVANLQLITRELLSMHHQSDPSLSK
EFDFLPPVDSRSVSGFVGLKNGGATCYMNAVFQQLYMQPGLAEAFLSIEDDTEQPDESVF
CQVQSLFGHLMESKLQYYVPENFWKIFKMWNKELYVREQQDAYEFFTSLVDQLDEHLKKI
GREQIFKNTFQGIFSDQKICKDCPHRYEREETFMALNLGVTSCQSLEISLDQFVRGEVLE
GTNAYYCEKCKEKRTTVKRTCIKSLPSVLCIHLMRFGFDWESGRSIKYDEQIRFPWVLNM
EPYTVSGMARQDGGAEGGEGRGEAGGSPRKKVTISENYELVGVVVHSGQAHAGHYYSFIK
DRRGSARGRWYKFNDNVVEEFDMNDETLEYECFGGEYRPKVYDQSNPYPDVRRRYWNAYM
LFYQRISDQNSPVLPKKSRVSVMRQEAEDLTLSAPSSPDVSPQSSPRPARANNDRLSVLT
RLVRKGEKKGLFVEKMPARIYQMVRDENLKFMKNRDVYNSDYFNFTLSLASVNATKLKHP
AYQAMARVSLQLAVHFLFHTYLHTKKKLRVDTEEWMTTVEVLLSKSSEACHWMAQYLVGP
EGREITKVCLLECGVREVRVVVAAILEKTLESALHFADSGLDSLTDALLSLLDKDVPENV
KNCNQYFSLFSNFAQRGSGPCHLLLKHSAYRRMLIFLLGPNRQNNQNRRWSPAQAREFLH
LHSTLALMTLHSDLNTQHTHDQGVCKLIVSSIPASSRLLPLNADIMASLFSPEGQPYLLE
VMFAVRELSGPLTVLIEMVTYCSFCNEPFSLGVLQLLKTQLETAPPHELKNVFQLLQELL
VVEDPLQTQRLKYAFESEKGLLALMHQSNNVDSSRCYQCVKFLVTLAQKCAPAKDYFKDL
SGHWSWAVQWLQKKMSEHYWTPQSNVSNETSTAKTFQRTISAQDTLAYATALLNEKEPSG
SSNGSDGSPANENADRSLRQGSESPMMLGDSKSDLEDVDP
NT seq
7863 nt
NT seq
+upstream
nt +downstream
nt
atggagacagaagaggaacaacatatgacaactctcctctgcatgggtttcccagatgca
gtggcgatacgcaaggcgctacgcctggcgaagaacgacatcaacgaggctgttgcgctc
ctgaccaacgaaagccccggtcttgggtatggatatgagccgatggagagtggccctgcc
ccaggcccgagtggagacggggagtccagtgggcggaccgggactggagggttcgaccca
cctcccgcataccacgatgtggtggagagcgagaggagtaatgatgagaatgggaattgt
tcaggcagcagtatggagttccccaccactaacctgtatgaactggagaacagagtgttc
actgaccactggtcaatcccctacaagagagaggagtcactgggcaaatgtctgattgca
gccacctgccttgccaaacacggtctggcggatgcagatgaaaactgtaaacagtttatg
gacaggtgtatgcacgaggcctttaaaaagctcctgaccagtagtgcggtccataagtgg
gggacagagatccatgaggggatctacaacatgttgatgctactggtggagctggtggct
gagagagtcaaacgggaccccataccagttggcgtgatgggtgtactgactattgccttc
aacccagacaatgagtaccactttaagaatcgtatgaagacgtgtcagaggaactggagc
gaggtgtttggagaggaagccatgtttgctgtgtcacctagcaacagctaccaaaaggag
cctcatggctggctggtagatttggtcaatcggtttggagagatgggagggttcactgct
atccaggctaaactcaatacacaggagatagagattgggtgtgtgtctgctctggtccag
cctctctctgtgtgtgcagaatacctcaactccagcctggtgcagcccatgttggatcct
gttatccataagatgatcacctatgttcagaacctggaggagaaggacctgaaagacaag
aggctggtgagcatcccagaactgctgtcggccataaagctgctgtgtatgaggttccag
accaccctggtcaccgtggtggacgacctgcgcctggacactctgctacgcatgctgaag
actcctcacttctctaccaagatgaactccctcaaagaggtgactaagctgattgaggag
agtactatgtctaagacggtgaagaatgccattgacacagacagactgctggactggctg
gtagaaaactctgtcctctcaatagcactggagggtaacatagaccaggcccagtattgt
gatcgaataaaaggcatcattgagttgctgggcagtaaactgtctctggacgagctctct
aagatctggatgatacaggcaggacagtcgtccacggtgattgagaacatccacaccatc
atggctgcggctgccgtcaagttcaacttagaccagctgagccacctgtttgtccttata
cagaagagctgggaggtagagagtgaccgtgtgaggcagaagctgctcagtctgattggg
aggatcggtagagaggcccgctctgaggccaccacagggaaggtgctggaggtgctgtgg
gagttagcccacctgccaaccctgcccacctccctggtacagcaggcgtctgaggaacac
ctggccatcctcactgacgcgtacgctgtgaaggagactgtcaaacgctgctacatcatc
aaatgtatagaagacatcaagaagactcagactgaggaggagggtaaaaccagcgacatt
cagagctcgtttcttactggctcctggggcaagaagaaagccaaagagaactcattggcc
aaatcttcacagcagggcagcccccaagcggtctgggtggttccagctctgcggcagctc
catgagatcacacgttccttcatcaaacagacctaccagaaacaggacaagcagagcatc
atccaggacttgaagaagaactttgagatcgtcaaattgatcacaggatctttggtggtc
tgtcatcgactggctgtgtctgcagctgggagcaatggactggccggacacacactcgta
gatggacgatacacctaccaggagtatctagacggccacctgaggttcctggccttcttc
ctccaggaggccagcctctacctggtctggaacagagccaaagaactatgggattgcctg
gtctctgggcctgaagtctgcgagctggacagagagatgtgttttgagtggttcactaag
ggccagcatgatctggagagtgatgttcagcagcagctcttcaaagagaagatcctcaaa
ttggagccctacgagattactatgaatggcttcaatctgttcaagaccttttttgagaac
gtcaacctgtgtgaccatcgcttgaaacgccaggggactcaactgtgtgtggagcggctg
gacctgtctgggatggactttatctggcgcatcgccatggaaacgcctgacgaggagatc
gctaacgaggccatccagctcatcatcacctacagctacaccaacctcaacccaaagatg
aagaaggattctgtgtctttacacaagaagttcattgctgattgttacaaacgactggag
gcagccagttcagctctaggaggccccacgttgactcatgctgttaccagggcaaccaag
atgctgacggccaccgccatgccaactgttgctacgtcggtccaatcaccttccaggtcc
accaaactggttatcattgagaggctgctgctattggctgagcgttacgtcatcactatc
gaggatctgtactctgtgcctcgtaccattctacctcacggagcgtcgttcaacggccac
cctgtctctctacacgtcacctatgagtccaccaaagacaccttcaccctggaggcccac
agtaatgagactgtaggcagcatccgatggaagatcgccgagcacctcagctgtccagtc
gacaatgtccaaatctttgccaatgacagcgtgttgactatgaaccgggaccagaagctg
ctgtcccagctggggttcagtgatgagcagtctctgacagtgaagagctctggcacaggg
acaccctcaggtggcagctctgaatcctccgcctccgcctcctcctcctccagctctgcg
gtcttcaactcagcctacgctatggaacaggagaagtcccttccaggcgttgtcatggcg
ttggtgtgcaacgtgtttgagatgctctaccagctggccaacctggacgaaccccggaca
accctgcgtgtgcgtaagctgctgctgctgatcccaacagacccagaggttcaggatgct
ctagataactttgttcccaaagagtccagtgtatggagtcaccagaagacgctgttcacc
ctgggtcaggggtcaggctctcggtctccgtctctgggttctaagcagcagcaccagccc
agtgctgcctccatcttggaatcactcttcagatccactgctcctgggatgtccaccttc
agagtcctctacaacctggaggtgttgagttctaagttgatgccaacctcagatgacgag
atggctaagaccagtgtcaagtctttctgtgagaacttcctgaaagctggaggtctcagt
ttggtggtgaacgtgatgcagcgagactctattccctctgaggtggactatgagaccaga
cagggagtctactccatctgtctacaactggccaggttccttttggttggccagagtatg
ccgtcgttgctggatgatgatgtcatccgggagggcgacacgctgtctagtcggccgttc
cgtaatgcggggcgaccggggaggcagctgtcgctgtgtggaacgccagagaagagctcc
tatagacagatgtctctgtctgaacgctcctccatcagagtagaggagatcatccctgct
gcacgcgtagctatacagacgatggaggtgggggacttcacctcgacgttggcgtgcttc
atgcgtctgacatgggcagcagccgctggccgattggacctcgtcggcagtccacagcca
atcagacctgagcacagctcgctcctcccacttggggtccgcacccgtgtcagcagcact
ggaagtaactgcagctccagcagtgagggcgaagcgccacccacagctctgcatgctggg
atatgcgtgaagcagcagagtgtttctattaaagactgcatcatcgctagagaggccctg
tcactactggtcacctgtctacagctacgaacacagcagctaggctcattctacatcctc
ccctgtgtcagcgacttcatcatcgacatcctgctaggatcagccagtggagagatccgg
cgtgtggcatgtgaccagctgtacacgctgagccaatccgacagctctgcgttccctgag
atcgtcaaacccaacgtgttcctgctccgagtcgtccttgcctcccagctgcctctctgg
agccccacgtctgtcatgagaggagtcaaccagaggttgctgtcacagtgtactgagtac
tttgacctgcgatgtcaactactggatgacttgaccagttcggagatggaggtgttgtca
gtgagtgcggtggccatgttggaagatgaaatcagctggttggataactttgagcccagc
tggagctctgagatggagaccagtgaggctgacaacatcctgcaggctggacacctccgc
ctcatcaaaacactactgtcactctgtggcacagagaaggaacaactgggtcactctctg
atccagcagctgttagatgacttcctcttccgagcatcgcgcatcatcctgaacacgtct
aaccccgcctccagctccccccccagccacgacttcttccccaagtgcagtacggccagc
agcagactggcagcctacgaggtgctggtgatgctggcagacagctctgtggccaaccta
cagctcatcaccagagagctgctgtccatgcaccaccagtcagacccttcgctcagcaag
gagtttgacttcctcccgccggtggacagtcgctctgtgtcggggttcgtagggttaaag
aacggtggagccacctgctatatgaatgctgtgttccagcagctgtacatgcagcctggc
ctggctgaggcctttctgtctatagaggacgacacggagcagccagacgagagtgttttc
tgtcaggtccagtctctgttcggacacctgatggagagcaagctgcagtactacgtccct
gagaacttctggaagatctttaagatgtggaataaggagctgtatgtacgagagcaacag
gatgcctatgagttcttcacttcactggtggaccagttggacgagcaccttaagaaaatc
ggccgtgagcagatctttaagaacactttccagggaatcttctctgatcagaagatctgc
aaagactgtcctcaccgatatgagcgagaggagacgtttatggcgctgaacctgggtgtg
acttcgtgtcagagtctggagatctcattggaccagttcgtcaggggggaggtgctggaa
ggaaccaacgcctactattgcgagaagtgcaaggagaagcgtaccacagtgaagcggacc
tgcataaagtccctgcccagtgttctctgtatccatctgatgcgcttcggattcgactgg
gagagcggacgctccatcaaatacgacgagcagatcaggtttccctgggtgctgaacatg
gagccctacacagtgtctggcatggctcgtcaggatgggggggcggaggggggagagggc
cggggggaggcaggtggctcacccaggaagaaggtcactatctctgagaactacgagctg
gtgggagtcgtagtccacagcggacaggcgcacgctggacattactactccttcataaag
gaccgacggggaagtgctagaggaaggtggtataagtttaatgacaatgtggtcgaggag
tttgacatgaacgacgagacactggaatacgagtgctttggaggagagtaccggcctaaa
gtctacgatcagtctaacccttacccagatgtgcggcggcggtattggaacgcctacatg
ttgttttaccagaggatcagtgaccagaactctcctgttctccctaagaagagcagagtc
agcgtcatgaggcaagaggcagaagacctcacgctttcggcgccctctagcccagacgtc
agtccccagtcatcccctcgccctgccagggccaacaatgaccgtctctctgtcctgacc
cgcctcgtacggaagggagagaagaaaggactgtttgtggagaagatgcctgctaggatc
taccagatggtgagagatgagaacctgaagtttatgaagaacagagatgtgtacaacagc
gactacttcaacttcactctgtcactggcctccgtcaacgcgacaaagctgaagcaccca
gcctatcaggccatggccagagtcagtctccagctagcagtccacttcctgttccacacc
tacctccacaccaaaaagaagctgcgggtggacacagaggagtggatgactacggtggag
gtgctgctgtctaaaagcagtgaagcctgtcactggatggctcagtacctggtgggacct
gagggacgagagatcaccaaagtgtgtctgttggagtgtggggtgagggaggtgagggtc
gtagtggcagcgatcttggagaagaccttagagagtgcgctccacttcgctgactctgga
ttggacagcctgaccgacgcgctcctctccctattggacaaagacgttcctgagaacgtc
aaaaactgcaaccaatacttcagcctcttcagcaactttgctcagagaggctctggtccg
tgccatttgttgttgaaacactcagcgtatcgtaggatgctcatctttctcctcggaccc
aacagacagaacaaccagaatcggaggtggagtccagcccaggccagagagttcctgcat
ctccactccactctggccctgatgactctccactcagacctcaacacacagcacacacat
gatcaaggtgtgtgtaagctgattgtgagcagtatccctgcctcctcccgcctcctcccc
ctcaacgctgacatcatggcctcgctcttcagccccgagggacagccttacctgctagag
gtgatgtttgcggtgcgggagttgtcaggccctctgactgtgctgatagagatggtgacg
tactgctccttctgtaacgaacccttctccctcggagtactacagctgctcaagactcag
ttggagaccgctccaccccatgagttgaagaacgtgttccagctgctgcaagagctgctg
gtggtagaggaccctctccagacccagagactgaagtacgcctttgagtcagaaaaaggc
ctgctagcattgatgcaccagagtaacaacgtggacagcagccgctgctaccagtgtgtc
aagttcctggttaccctggcacagaagtgtgctcctgctaaggactattttaaagatctg
tctggtcactggagctgggcagtgcagtggctgcagaaaaagatgtcagaacactactgg
actcctcagagcaacgtgtccaatgagacgtccacagccaaaacgttccagcgcaccatc
tcagcccaggacacgctggcctacgccacagcgctgctcaacgagaaggagccatctggc
agcagcaacggctctgacggcagcccagccaacgagaacgcagaccgcagcctccgacag
ggttccgagtctcccatgatgctcggtgattcaaagagtgatctggaggatgtcgaccct
tag
DBGET
integrated database retrieval system
