KEGG   Oncorhynchus nerka (sockeye salmon): 115145105
Entry
115145105         CDS       T07952                                 
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1-like isoform X1
  KO
K12171  E3 ubiquitin-protein ligase SH3RF [EC:2.3.2.27]
Organism
one  Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:one00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:one01009]
    115145105
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:one04121]
    115145105
Enzymes [BR:one01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     115145105
Protein phosphatases and associated proteins [BR:one01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     115145105
Ubiquitin system [BR:one04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    115145105
SSDB
Motif
Pfam: SH3_9 SH3_1 SH3_2 zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-RING_5 zf-C3HC4_3 zf-C3HC4_4 zf-RING_4 zf-RING_11 zf-rbx1 zf-Nse Prok-RING_4
Other DBs
NCBI-GeneID: 115145105
NCBI-ProteinID: XP_029542229
EnsemblRapid: ENSONEG00000008775
LinkDB
Position
LG17:20251382..20312728
AA seq 867 aa
MDESVLLDLLECPVCLERLDATAKVLPCQHTFCRRCLQGILSSRAELRCPECRTLVECAV
DELPSNILLVRLLDGIKQRPRRAGPVAGVCTNGTAGVRMQGNGPRDSGTPGAQPQRGQAK
STPVRGVPQLPCAKALYNYDGKEPGDLKFSKGDVIILRRQVDENWYHGEIGGVHGFFPTN
FVQIIKPLPQPPPQCKALYDFELKDKEADKDCLPFTKDDILTVIRRVDENWAEGMLGDKI
GIFPISYVEFNSAARQLIELDKPGDSSGDSGEGASSGPQSNGGPHRAGEKKNSKKRHSFT
SLTMSHKPCLAPPPQRHSMEISGPVLISSSNPTAAARISEISGGLSCSAPSQVHICTAGL
IVTPPPSSPVTTATVFTFPPETSYTSIPVDARPPPPPPPPQSSAVGAASSLAASQRPSPS
TSEQSGRQRPTVYVALFPYTPRKEDELELRKGEMFLVLERCQDGWFKGTSMHTGKIGVFP
GNYMSPVSRTVSGSTQPKAPLALCTQAGRGVTIVSPSSTPLGAIVPGPDFNKALPICPGP
ALSSPLPAGMVTAAHVTTGQAKVLMHMTSQMTVNQARNAVRTAACHSQDRPTAAVTPIQS
QTSVAYLAVCQSQTCSSSSNPAQGCVRAGVALGCAAASLTPPNVSAASLDGDALRQVAVL
TMPVAPGNGNSMSANSSLACRLDKDGKREKKGILKLLSSNKKKSRPSPPSSPTLEAEQAA
TGDVFQGAMGPDITPSPSSAGVVVGNHGRAVPCPVEPESTAASSSSCSSAPELTHRKSSP
LDGCAPIAPPPRQACSSLTSQQHDARPILCERYRVVVSYPPQSDAELELKEGDIVFVHRK
REDGWFKGTLQRNGRTGLFPGSFVDGI
NT seq 2604 nt   +upstreamnt  +downstreamnt
atggatgaatcagtgctgttggacttgctggaatgcccagtgtgtttggagcggctggat
gccacagccaaggtcctcccttgccagcacaccttctgcaggcgctgccttcagggcatc
ctgagctcccgggcagagctgcgatgcccagagtgccgtacgctggtggagtgtgctgtg
gacgagctgcccagtaatatcctcctggttcggctgttggacggcatcaaacagagaccc
cgcagggcgggccctgtagctggagtctgcaccaacggcacagctggagtcaggatgcag
ggcaacggacccagagactcaggcactccgggagcacagccccagagaggccaggcaaag
agcaccccagtgaggggtgtaccccagctgccctgtgccaaggccctgtacaactacgat
ggcaaggaacctggggacctcaagttcagtaagggtgatgtcatcatcctgcgacgtcag
gtggatgagaattggtaccacggagagattggcggagtccacggtttcttccccaccaac
tttgtccagatcatcaagccactgccgcagcccccgccacagtgcaaggccctctatgac
tttgagctcaaagacaaggaggcagacaaggattgcctgccctttactaaggatgatatt
ctgactgtgattcgccgagtggatgaaaactgggcagagggaatgctgggggataaaata
ggaatcttccccatatcatatgtcgagtttaactctgcggcccgccagctgattgagtta
gacaagcctggggactccagtggggactctggcgagggggcctcgtcgggcccccagagt
aacgggggcccccaccgggccggggagaagaagaacagtaagaagcgccactcgttcacc
tccctcaccatgtcccacaagccctgtctggccccgcccccccagagacactccatggag
atcagtgggccggtcctcatcagctcctccaaccccacggcagccgcacgcatcagcgag
atcagcggaggactgtcctgcagcgcaccctcacaggtacacatctgcacagctggactc
atagtgacccctccccccagcagtcctgttactacggcaactgtcttcacgtttcccccg
gagacgagctatacatccatccccgtggatgctcgccctcctcccccgccgcctccacca
caatcttcagcggtgggagcagcctcctcgttggctgccagtcagagaccctcccccagc
actagtgaacagagtgggcggcaaagacccacagtctacgtggccctgtttccctacacc
ccccgtaaggaggatgagttggagctgaggaagggagagatgttcctggtgctggagcgc
tgtcaagatggatggttcaaaggcacctccatgcacactggcaagataggagtgtttcct
ggcaattacatgagcccagtcagcaggacggtgtccggcagcacccaacccaaagcgccc
cttgctctgtgcacccaggctgggcgaggggtcaccatcgtcagcccctcctccactcct
ctgggggccattgttccagggcctgacttcaacaaggccctccccatctgcccgggccca
gccctctccagccctttacccgcgggcatggtgactgctgctcacgtgacaacgggacag
gccaaggtgctcatgcacatgacgtcccagatgactgttaaccaggcacgcaatgctgtc
aggacagcagcctgccacagtcaggaccggcccacggctgctgtgacgcccatccagtca
cagacatctgtagcctacctggcagtgtgccaatcccagacctgctcctcctcttccaac
cctgcccagggctgtgtccgtgctggggtggcactgggatgtgctgctgcctccctcacc
ccgccaaacgtcagcgccgcgtccctggatggcgatgccctgcgacaagtggcagtcctc
accatgcctgtcgcccctggcaacggcaactccatgtcagctaactcctccctcgcctgt
cggctggacaaggatggcaagagggaaaagaaaggtattctgaagctgttgtcgtctaac
aagaagaagtctcgcccctctcccccctcatcccccaccctggaggcagagcaggctgct
acgggggatgtcttccagggggccatgggccccgacattaccccttctccctcctctgct
ggcgttgtcgtgggtaaccatggccgtgctgtcccctgccctgtggagcctgagtctact
gccgcctcttcatcctcctgttcctcagccccggagttaacgcaccggaagagtagcccc
ctggacggatgtgcccccatcgccccgccacctcgccaggcatgctcctccctcacctcc
cagcagcacgacgctcggccaatcctatgcgagaggtacagagtggtggtgtcctacccc
cctcagagtgatgcagagctggagctcaaagagggagacatagtgtttgtccacaggaag
agggaggacggctggttcaaaggaacactccagaggaacggcaggaccggactgttccct
ggcagcttcgtagacggcatctga

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