Oncorhynchus nerka (sockeye salmon): 115145109
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Entry
115145109 CDS
T07952
Name
(RefSeq) SLIT and NTRK-like protein 6
KO
K25837
SLIT and NTRK-like protein 6
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04514
Cell adhesion molecules
one04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115145109
04517 IgSF CAM signaling
115145109
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_LRWD1
LRR_14
LRR_9
LapA_dom
Motif
Other DBs
NCBI-GeneID:
115145109
NCBI-ProteinID:
XP_029542241
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Position
LG2:4868336..4877233
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AA seq
867 aa
AA seq
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MPRILTSPHGSTSLTQASFGLATVFLTLHNGYNGQKMLPRILFLCSFFTAACFQDIHPSK
VFLSESCDSLCTCEEKDGILYLNCEERNISKISQIKVPSALPFHLNLYKNDLVELNAEDL
EGLKNAVSLHLGANSIQELEPGVFSALGSLKKLHINSNFLVTLKEDTFHGLVNLEFLQAD
TNFIRVVEPGAFSKLIRLKVLILNDNAIEFLPSNIFRFVPLTHLDLRGNQLQTLPYVGFL
EHIGRIMELLLEDNDWMCDCEILHLKIWMENMRAQSAIGEVVCSSPHHLRGTILAKIKRD
VLCPSHADINLEEPSKSLDMVVTPSSKVAEIPKLEDVVKIPTPSYVPGSPCVEHCSCHNH
PVAGFLMHCQDRGIQRISDIGILEQSPTKLVLTGNMIQRLLKYDFVTYDSLELLNLANNR
IDYIDNETFLSLSNLKKLYLNGNRIETLSATMFIGLHNLEYLYLEYNIIKEIVPGAFNPL
PNLKLLSLNNNLLTSLPLQIFRNVPLTKLNLRKNLLMYLPVSNVLDQLDSLEQIYLEDNP
WDCSCDLISLKQWVEKLRKDTVVGSILCHTPRKVEKAELRALRNELLCRGLVTYSLPTDE
DETTTVATDGSRSGFFSSITDSVPLSVLILSLLVIFLMVIFCSAGIVAFLVHRRRRRVKK
KQAEEQPRESSSPIHLQYSMYGQKTTHHTLGQRTGNTVYDERSHSPIVQICRNPTYCTQH
KEYESDLNELDEPKHICRSIMETENTSPLTGSNLKFRAVTSDCPTEFVTLGDASSLYKNI
LERERVRELQQLGITEYLRKNMSQLQPTVEMQVPGHHEELKLMETIMLSRPRKVMVEQTK
NEYFELKANLHTEPDYLEVLEHQTAFN
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcatccttacgtctccacatggatcaacctctctaacccaagcatcatttgga
ttagccacagtctttctcactctgcacaacggatacaacggacagaaaatgctaccccgc
atccttttcctttgctcatttttcactgctgcttgtttccaagacatccacccctccaag
gtatttctgagtgaatcctgtgactcattgtgtacttgtgaagaaaaagatggcatcctg
tatcttaactgtgaggagagaaatatcagcaagatctcccaaatcaaagtgccgtcagct
ctacctttccacctcaatctgtacaaaaacgacttggtggagttgaatgcagaagacttg
gaaggtttaaagaatgccgtttcacttcatctcggggctaatagcatacaagagcttgaa
cctggcgtctttagtgcactgggctccttgaagaagctccacatcaacagtaatttcctg
gtcacgttgaaggaagacacttttcacggcttggtaaatttggagtttctccaggcggac
acaaacttcatccgcgtggtcgagccgggggcattcagcaaactcatccgcctcaaagtt
ctgatcctcaacgacaacgccattgagtttcttcccagcaatattttccggtttgttcca
ctcacccacttggacctgcgggggaaccagttacaaaccctgccttacgttggcttcctg
gagcacattgggcggatcatggagcttcttctggaggacaacgactggatgtgcgattgt
gagatccttcacctgaagatctggatggagaacatgcgggcccagtcggccattggggag
gtggtctgcagcagcccccatcacctcaggggcaccatcctggccaaaatcaaacgggat
gttctctgcccctcgcacgctgatatcaacttagaggagccttccaagtcactggacatg
gtggtcactccgtcttccaaagtggcagagattccgaagttagaggatgtcgtaaagatt
ccgacaccttcttatgttccagggagtccttgtgtggagcactgttcttgtcacaatcac
cctgtggctgggtttttaatgcattgtcaggatagagggattcaacggatttcagatatt
ggaatacttgagcaaagccctaccaagctggtgctcacaggaaacatgattcagagactg
ttgaaatatgactttgtcacatatgacagtttagagttattgaatttagccaacaatcga
attgattacattgacaatgaaacttttctcagcttaagcaatttgaaaaaactttatctc
aacggcaacagaattgaaaccctttccgcgactatgttcattggactccacaaccttgaa
tacctatatttggaatataacattatcaaagaaattgtcccaggagcttttaatcctttg
ccaaatctcaaactcttgtctttgaataacaatctgctgactagtctcccattgcagata
tttcgcaacgtgcccctcaccaaactgaacctgagaaaaaatctgctcatgtacctgcct
gtaagcaacgtgctggaccagcttgactctttagagcagatttatttagaggacaacccc
tgggactgcagctgtgacttaatcagtctcaaacagtgggttgagaagctgaggaaagac
acagtcgtaggttccattttgtgtcacacaccgagaaaagtggagaaggctgagctgagg
gcccttagaaacgagttgctgtgccgcggcctagtgacctactccttgcccacggatgag
gacgagacaaccacagtggcgactgacggctctaggagcggtttcttcagctcaatcacg
gactcagttccgctctccgttctgatccttagcttgctcgtcatcttcctcatggtcatc
ttctgttcagcagggattgtggcattcctcgtgcacagaaggcgaaggagggtgaagaag
aaacaggcggaggagcagccgcgagagagcagcagccccatccacctgcaatacagtatg
tacggccagaaaaccacccaccacacactggggcagaggaccggaaacaccgtgtacgac
gagcgctcacacagccccatcgtccagatctgccgcaaccccacctactgcactcagcat
aaagaatatgagtccgacctcaatgaactggacgaaccaaagcacatctgtcgtagcatc
atggagacagagaatacttcccctctcacaggctctaatttgaagttcagagctgtgacg
tcagactgcccaactgagttcgtaacactcggcgatgcgagctccctctataaaaacata
ctagagagggagagggttagggagctgcagcagctcggaattactgaatacctcaggaaa
aacatgtcccagctacaaccaacggtagagatgcaggttccaggacaccacgaggaactg
aaattaatggagactattatgttgtcgagaccgaggaaggtcatggtggaacaaacgaaa
aacgagtactttgaactcaaagctaacctacacaccgagccagattatttggaggttctg
gagcatcaaactgcatttaactga
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