Oncorhynchus nerka (sockeye salmon): 115145150
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Entry
115145150 CDS
T07952
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 3-like isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115145150
Membrane trafficking [BR:
one04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
115145150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Myosin_TH1
Motif
Other DBs
NCBI-GeneID:
115145150
NCBI-ProteinID:
XP_029542316
LinkDB
All DBs
Position
LG17:complement(21765894..21819720)
Genome browser
AA seq
1519 aa
AA seq
DB search
MASKDVTASCFVSVSRDITESIRKIVDKSSVKFIRGIKLDTKNGKSEDRILVLTTWRLYF
LTAKVPTKIEVTFNFLEIRAMNSHPEFQVVIDLDKSTYSLRLQSRDHLSHVVSHVNFALS
RIFNNSVFSPSICHSDSDLSEGSRKYSPSSETSVETQRACGGFSETYAALCDYNGISCKE
EVQWDVDTIYHSQDNREFNLVDFSHLESRDLAVIVASMAYNTWFTKLYCKDLRIGSEVSE
QVLHTLSKSSSLEELTLENAGLKSDFAQKLSVALSENPASVIHSLNLAHNTLDNQGVSNL
IQQVCRLSKGLRLLNLSKTSLNSKGVVSLSQALCSSDEYSNSLLHLDLSKNPGVLSGEDA
SNLYLFLSQPNCLVHLDLSDTDCAVDSLFGALLRGCCADLSYLNLSKNSFSHRKVKETLP
LFRQFFSSAFSLTHVSLASMKLPPDALRSLFIGLTTNPHINDLHLDLSGCELKSAGASVI
QELFPRVSSIATLDISDNGLDADLLSVLPALSRHTSLKHLYLGKNFNIKSSRVLEEILQK
LVQLIQEEECALQSLSLADSRLRSRGTVLVNALGSNTCLRKVDLSGNSLEDIGAKMLSKA
LQINTTLRSVTWDRNNTSATGFLDVARALEHNFTLQYMPLPLSDISQAYRSAPERAEQAL
TKIQRALLRNNQTQRFSQRQALRLHQGLVTSTAEQVMERLCVRVQQQVCVLRGVGEMEEI
QAAKQVLKEARNSRALYPSLCELAHVLSVDGPVRQRLDSLAGELAKAADKELQVIVDSMV
SLCRELCPLSSSAAERLSPPLSSVSERVSIPRSAIRTALMERAAQDIHRALEEVKLSVVS
YLTNSIVDQILQELYATQKTLTRQVSQVKRWEGTCDGGTGRRSHRHRDSLDITDEELGTS
IDTIAIKKHSSRTRRIRPVSTRLSLCDDSSSSPPPSTSSSFSALSRSASCEGLSELPTQG
APLHHVTRVRPRPPRRHRAGHAPSDTHCTENGAVTPLDDGLPDFYSKRVLPDSQLSSLHK
AHSLRRKKRRNMLAIFGFRRNRNSTLSNQGPESGGDGCGEECHTVATAPTGLVNPQYHTH
TPRTATENVYTLLQPPRSAARACSPGEGADGKVEDQRGEEPVGLSLQPLQSIPPQPGMPG
SRHPFYSPSQPSKLETAHEQPADTDRHWSENRQVDRQWTEGLHTDRERTLIRPADRHSDR
HWTDDKLSDKTWTEGRTAERQMDRYWTESRHADRLMERQWTVDRHTQRQIDRQFDRDRQW
TVSRQQTDRKWAEGRLTDIQIDRQWIESRQSGRQSDRQAQGQHLAQMPLPPYPSDRTPSP
KSETDSQKNMEATVDRQKYSDTQTDRHLHSDTAVGQVEGWRGGGGVPPGRVSVNASKPDP
PPQSSKPIQSKLRQRHLQESSGAEEEADGDRDGGRMERKERDRGRDAEGQPPPIPEKPKT
SYVSSPIEYANERPIPHLAPSAFNKPVLGLADRAFSQGEEAVRPQAPVKPQRNRKAMSCD
TGTDRDALIISRSPQIANL
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atggcatctaaagacgtaactgcctcttgtttcgtcagtgtgagcagggatattacagag
agtatcaggaagattgttgacaagtcatccgtcaagtttatacgcggcattaagcttgac
accaaaaatggcaagtcagaggaccggatactggtcctcacaacatggagactctatttc
ctgacagccaaggttccaacaaagattgaggtgacatttaacttcttggagatccgagcc
atgaacagtcacccagagtttcaggtcgtcatagacttggacaagtccacttattccctg
aggcttcagtcacgtgaccacctcagtcatgtggtcagccacgttaactttgccctgtcc
agaatattcaacaactctgttttctctccctccatctgtcattcagacagtgacctttct
gagggaagcaggaagtactcccccagctcagagacgtctgttgaaacccagagggcctgt
ggagggttttccgagacttatgctgccctgtgtgactacaatggaatcagctgcaaggag
gaagtgcaatgggatgtggacactatctatcactctcaagacaacagggagtttaaccta
gtggacttcagccacctggagagcagagacttggcagtgattgtggcctcaatggcatac
aacacctggttcaccaaactatactgtaaggacctacgcatagggtcagaggtcagtgag
caggttttgcacacactcagtaagtcttccagcctggaagagctcactctggagaatgct
ggtctcaaatctgactttgcgcagaagctgtcagttgcgctctcagagaatcctgcttct
gtcatccactctctgaacttggcacacaacacattggacaaccaaggtgtgtctaacctc
atccagcaggtgtgtcgtctcagcaaaggactgcgtctcctcaacctctccaagacctcc
cttaactccaaaggtgtggtgtctctgtctcaggctctgtgctccagtgatgagtattcc
aactctctactgcacctggacctgagcaagaaccctggggtcctgtctggggaggacgct
tcgaatctgtaccttttcctttcccagcctaattgtctggtccatttggacctgtctgac
actgactgtgctgttgactctctatttggggctctgctgagggggtgttgtgctgatctc
tcctacttgaatctctccaaaaattcattctcacacaggaaagtgaaggagaccttgccg
ttgttccgtcagttcttcagctcggccttcagtctcacccatgtcagcctggcctctatg
aagctaccccctgatgccctgaggtctcttttcataggtctgaccacaaaccctcacatt
aatgaccttcacctggacctcagtggctgtgagctgaaatctgcaggagcttctgtgatc
caggagctgttccccagggtctcctccatcgccaccctggacatctctgacaacgggctg
gatgcagaccttctctcagtcctgccagctctctccagacacacctccctaaagcacctg
tatctgggcaagaacttcaacatcaagagcagcagggtgctggaggaaatcctacagaag
ctggtccaactcatacaggaggaggaatgtgccctccagtccctctccctggctgactcg
cggctgcgttctcgcggtacagtgctagtaaatgctctgggtagtaacacctgcctacgt
aaggtggacctgagtgggaacagcctggaggacattggagccaagatgctgagcaaagcc
ctacagatcaacaccacactcaggagtgtgacgtgggatcgtaacaacacctcagctaca
ggattcctggatgtggctcgagcccttgaacataacttcaccttgcagtacatgcccctc
cccctcagtgacatcagccaggcgtaccgtagcgcccccgagagggcagagcaggcactg
accaagatccagcgtgctctgctgaggaacaaccagactcagcgcttctctcagagacag
gctctacggctgcaccagggcctggtcaccagcactgctgaacaggtgatggagcgtctg
tgtgtgcgtgtgcagcagcaggtgtgtgtgctgcgtggagtaggggagatggaggagatt
caagctgctaaacaagtgctgaaggaggccaggaactctcgcgcgctgtacccctccctc
tgtgagctagctcatgtgctgtcagtagatgggccagtcagacagagactggactcactg
gcaggagaactggccaaggcagctgacaaggaactacaggtgatagttgactccatggtg
tctctctgtcgtgagctgtgtccgctgtcctcctctgcagcagagagattgagtcctccg
ctctcgtccgtctctgagcgtgtgtccatccctcgctcagccatccgtacggccctgatg
gagcgagcagctcaggacatccaccgcgcgctggaagaggtgaagctctcagtggtttca
tatctcaccaactccattgtggatcagatcttgcaggagctctacgccactcaaaagacc
ctgacacgtcaggtgtcccaggtgaagcgttgggaggggacatgtgatggagggacaggc
cggaggtcacacagacacagagactctctggacatcacagacgaggagctgggcaccagc
atagacacaattgccattaagaagcacagctctagaactaggcgaatacgacctgtttca
accagactgagcctgtgtgatgactccagctcctccccgcccccctctacgtcctcttct
ttctcagccctctctcgctccgcatcctgtgagggtctgtctgaactccctacccagggt
gcacctctacatcatgtgacgcgggttaggccgaggcccccacggagacaccgagcagga
cacgccccgtctgacacacattgcactgaaaatggagctgtcactcctcttgatgatgga
ctcccagatttctactccaagagagttctccctgatagtcagttgtcctctctccataaa
gcccactctctcaggcgaaagaaaagacgcaatatgctggccatctttggtttccgtagg
aaccgcaactcaactctctccaatcaggggccagagtctggcggagatgggtgtggggag
gagtgtcacactgttgccacggcacccacagggttggtgaatcctcagtatcacacacac
acacccaggacagccactgagaatgtctacacgctgctgcagccccctcgttctgctgcc
agggcctgctctcctggtgagggggctgatgggaaggtggaggaccagaggggggaggag
ccagtaggcctgagcctgcagccactgcagagcataccaccacagcctggcatgccgggc
agcagacaccccttctactcacccagccagccatcaaagctagagacagcgcacgagcaa
cctgcagatactgacagacattggtcagagaacagacaggtggacagacagtggacagag
gggcttcacacagacagagagaggacattaataagaccggctgacagacactctgacagg
cactggaccgatgacaaactgtcagacaaaacatggacagagggaagaacagcagagaga
cagatggacagatattggacagagagcaggcatgcagatagactcatggaaagacagtgg
acagttgacagacacacacagagacagatcgacagacagtttgatcgagatagacagtgg
acggtgagcagacaacagacagacagaaagtgggcagagggacgactgacagacatacag
atagacagacagtggatagagagcaggcagtcaggcagacagtctgacagacaagcccag
ggacaacatctggctcagatgcctctgcccccttacccgtcagacaggactccatcacct
aaaagtgagactgactcccagaaaaacatggaggcaaccgtggacagacagaagtactct
gacacacagacggacagacatctgcactcagacactgctgtaggacaggtggaagggtgg
aggggtggaggaggggttccccctggacgggtttctgtgaatgcatctaaaccagaccct
cctccccaaagcagcaaacccatccagtccaaactgagacagagacatctacaggagagc
tctggtgcagaggaggaagcagacggagatagggatggtggaagaatggaaaggaaagag
agagatcgaggcagagatgcagagggacagccacctcccattcctgaaaagccaaagaca
tcctatgtgtcttctccaattgagtatgccaatgaaaggccgatcccacatcttgcacca
tctgcattcaacaagccagtgctgggattggctgacagggctttcagtcaaggtgaggaa
gcagtgagacctcaagccccagtgaaaccccagaggaacagaaaggctatgtcttgtgac
acaggcactgacagggatgccctaataatctcgagaagcccccaaatcgcaaacctgtga
DBGET
integrated database retrieval system
