KEGG   Oncorhynchus nerka (sockeye salmon): 115145198
Entry
115145198         CDS       T07952                                 
Symbol
kdm4a
Name
(RefSeq) LOW QUALITY PROTEIN: lysine-specific demethylase 4A
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
one  Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:one00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:one03036]
    115145198 (kdm4a)
Enzymes [BR:one01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     115145198 (kdm4a)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     115145198 (kdm4a)
Chromosome and associated proteins [BR:one03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    115145198 (kdm4a)
SSDB
Motif
Pfam: JmjC Tudor_2 zf-HC5HC2H_2 PHD_2 JmjN zf-HC5HC2H Tudor_5 PHD DUF4537 DUF7141
Other DBs
NCBI-GeneID: 115145198
NCBI-ProteinID: XP_029542420
LinkDB
Position
LG17:26194841..26248201
AA seq 1066 aa
MATDTASQQTPGSKIMTFHPSMEEFKDFSRYIAYMESQGAHRAGMAKVISPKDWKPRRTY
DDIDDLVIPAPIQQVVTGQSGLFTQYNIQKKPMTVREFRKTANTDKFCNPRYVDFDELER
KFWKNLTFNPPLYGADVNGTLYDPDVTEWNIGHLNTILDTVERESGIKIKGVNTPYLYFG
MWKSTFAWHTEDMDLYSINYLHFGEPKSWYVVPPEHGKRLERLAKGFFPGSAQSCEAFLR
HKMTLISPSILKKYGIPFEKITQEAGQFIVTFPFGYHAGFNHGFNCAESTNFATQRWIDY
GKIATLCSCRKDMVKISMDVFVRKFQPDRYKAWKAGKDNIPIDHSKPTPEAAEFLTGEKT
GEPGKEGPSPSEAPDQEEDTPGTTAQEETSNLKLKVGKKRQREAVVEAKEDEDTEQAKEE
GEVAQKKVKLEKWSGGHTPAHKEPKPEDVKNELTMLPPNAQTNRNTNASRKLALQMKANN
SIKSTLIKSQPQTNSQSTQPAVPGPSSQSSEKAGPSEDVKPPAPANSPSPAHRLFQRTLS
PTDVLHVHSYAKGDYSEGESKEDMRSNSSDSEAEEQDDSKGAEEVAEDEGVQSKLGKLPH
HHPLMKDSMSDEELPEQPPVEEDGLEGELWAKPFVHLWQNRPPSLKREKEYNRRMGLQAP
YCSVCSLFQTYQRTECADDCKDTPVVLPGGRLRTKPLIAEMCFTTTTEPEEGAEEQALGA
LAPTTPHLEPDGTSLLISCSHCSVRIHTSCYGVDPKIVTKDWKCARCKANAMTESCCLCS
LRGGALQKANNKKWVHVLCAVAVLEARFVNITERSPVDLSGIPLQRFKLKCYYCKKRMKK
TSGCCVQCSHGRCSTAYHPTCAQAAGVLMQPDEWPFVVYVTCCRHKGPIQTERNKAAMHE
LTVGQRVICKHKNGRYYQCDVVQLSKETFYEVNFDDGSFSDNLFPEDIVSRNCAQLGPPS
QGEVVQVRWTDGLVYGAKFVAAHVIQMYQVEFEDGSQLTAKRDDVYTLDEELPKRVKSRL
SKASDMRFDGIFEDKEAIQQSKRQRVINSRYRGDYIEPVIYRAIME
NT seq 3201 nt   +upstreamnt  +downstreamnt
atggcaacagacactgcatcccagcaaactcctggctccaagatcatgacctttcaccct
tccatggaggagtttaaggacttcagccgttacatcgcctacatggagtcacaaggagct
caccgagctggaatggctaaggttatttcacccaaagactggaagcccagacgtacttat
gatgacatagatgacctggtgatccctgctcctatacagcaagtggtgactggccagtcc
ggtctcttcacacagtacaacatccaaaagaaacccatgaccgtccgagagttccgcaag
actgccaacacagacaagttctgtaacccccgatatgtggattttgatgagctggagaga
aagttttggaagaacctgacttttaacccccctctctatggagcggatgtcaacggaaca
ctctatgatccagacgtgacagagtggaacattggtcatctgaacactatcctggacact
gtggagagggagagtgggatcaagatcaaaggggtaaacactccttacctgtattttggc
atgtggaagagtaccttcgcctggcacactgaagacatggatctctacagcatcaactac
cttcactttggagagcccaagtcctggtatgttgttccccctgaacatgggaagagattg
gagcgtctcgctaaagggtttttccctgggagtgctcagagctgtgaagctttcctgcgg
cacaagatgactctaatctcaccctccatcctgaagaaatacggcataccatttgagaag
atcacccaggaggcaggccagttcatagtgaccttcccttttggctaccatgctggtttc
aaccacggcttcaactgtgcagagtctaccaactttgccacacagcgatggattgattat
ggcaaaatagccacactgtgctcgtgccgtaaagacatggtgaagatctccatggatgtg
tttgtgaggaagttccaaccagatcgctacaaggcatggaaggcagggaaagacaacatt
cctattgaccactccaagcccacgccagaggctgctgagttcctgacgggagagaagaca
ggggagcctgggaaggagggtccaagccccagcgaggcccctgaccaggaggaggacacc
ccaggcaccactgcacaggaggagacgagcaacctgaagctgaaggttgggaaaaagcgc
caacgggaagcagttgtggaggcaaaggaggatgaagacactgagcaagctaaggaggaa
ggagaggtagcgcaaaagaaagtcaagctggaaaagtggagtggaggacacaccccagca
cacaaagagccgaaaccggaggacgttaaaaatgagctaacaatgctaccacccaacgca
cagaccaaccgaaacacaaacgccagccgaaagctagcacttcagatgaaagccaataac
tctattaaatccactctaattaagtctcagccacagactaacagtcagtcaacccaacca
gcagtaccaggcccctcctcccagagctcagagaaggccggccccagtgaggatgtgaag
cctccagcaccagccaacagccctagccctgctcaccgactcttccagaggaccctgagc
ccgacagacgtgctgcacgtccacagctacgccaagggagactacagcgagggagagagc
aaggaggacatgaggagcaatagtagtgatagtgaagcagaggaacaggacgacagcaag
ggggcagaagaggtagcggaggatgaaggtgtgcaaagcaaactggggaagctgcctcac
catcaccctctgatgaaggacagcatgagtgacgaggagctgccagagcagcccccagta
gaggaggatgggttagagggagagttgtgggccaagccctttgtccatctgtggcagaac
agaccccccagcctgaagagagagaaggagtacaaccgtcgcatgggcctccaggcccca
tactgctccgtgtgctcattgttccagacctaccagcggacggagtgtgctgatgactgt
aaggacactccagtggtgttgcctggaggcagactgaggactaagcctctgatcgctgag
atgtgtttcactaccaccaccgagccagaggagggtgctgaggagcaggcgcttggagca
ctggcgcccaccacccctcacctggagccagacggcaccagcctgctcatcagctgctcc
cactgcagtgtccgcatacacaccagctgttatggcgtggatccaaagattgttactaag
gattggaagtgtgctcgctgtaaggccaacgccatgactgagagttgctgtttgtgttcg
ctgaggggtggagccttgcagaaagccaacaacaagaagtgggtccatgtgctgtgtgca
gtagcagtgttggaggctcgctttgtgaacatcactgagagaagccctgtggatctgagt
gggattcctctacagaggtttaaactgaaatgttactactgtaagaagaggatgaagaag
acgtccgggtgctgtgtgcagtgttcccatggccgctgttctacggcctaccaccctacc
tgtgcccaggccgctggggtcctcatgcagccagacgagtggcctttcgtggtctacgtc
acctgctgccggcacaagggccctattcagacagagcgtaacaaagcagccatgcatgag
ctcaccgtgggacagagggtgatctgtaagcacaaaaatggccgctactaccagtgtgac
gtggtacagctttccaaggagacattctatgaggtcaactttgatgacggctccttcagc
gacaacctctttcccgaggacatcgtgagccggaattgtgcccagctaggccccccatcg
cagggggaggtggtgcaggtccggtggacagatggtctagtctacggggccaagtttgtg
gctgctcacgtcatccaaatgtaccaggtggagtttgaagacgggtcacaactaacagcc
aagagagatgatgtctataccctggatgaggagctgcccaagagagtcaagtcaagactg
tccaaagcgtcagacatgcgtttcgatggtatatttgaggacaaggaggccatccagcag
tcgaagaggcagagagtgatcaactcacggtacagaggagactacatcgaacctgtgatc
tacagagccatcatggagtag

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