Oncorhynchus nerka (sockeye salmon): 115145208
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Entry
115145208 CDS
T07952
Name
(RefSeq) thyroid hormone receptor alpha-like isoform X1
KO
K05547
thyroid hormone receptor alpha
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04080
Neuroactive ligand-receptor interaction
one04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115145208
04081 Hormone signaling
115145208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115145208
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
one03310
]
115145208
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
115145208
Nuclear receptors [BR:
one03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
115145208
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
115145208
NCBI-ProteinID:
XP_029542444
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Position
LG17:complement(26733874..26834408)
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AA seq
403 aa
AA seq
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MKQHSNWPNGPKRKRKNSTCSLKSMSALSLSVPGYIPSYLEKDEPCVVCGDKATGYHYRC
ITCEGCKGFFRRTIQKNLHPAYSCKYDGCCIIDKITRNQCQLCRFRKCIAVGMAMDLVLD
DSKRVAKRRLIEENREKRKKDEIVKTLQTRPEPDSSEWELIRHVTEAHHHTNAQGSHWKQ
KRKFLPEDIGQSPGAPTPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLTMFSELPCEDQ
IILLKGCCMEIMSLRAAVRYDPESETLTLSGEMAVKREQLKNGGLGVVSDAIFDLGKSLA
QFNLDDSEVALLQAVLLMSSDRSGLTSVDKIEKCQETYLLAFEHYINHRKHNIPHFWPKL
LMKVTDLRMIGACHASRFLHMKVECPNELFPPLFLEVFEDQEV
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagcacagcaactggcccaatggaccaaaaaggaagagaaagaacagcacatgt
tcattgaagagcatgtctgcactgagcctctctgtcccaggatacatccccagctacttg
gagaaggatgagccatgtgtggtatgtggagacaaggccaccggctaccattaccgctgc
atcacatgtgagggctgcaagggtttcttcaggcgaactatccagaagaaccttcacccg
gcttactcctgtaagtacgatggctgctgcatcatcgacaagatcacaaggaaccagtgc
caactgtgtcgcttcaggaagtgcatcgcagttggcatggctatggacctggtgctggat
gactctaagcgggtagccaagcgtcgtctgattgaggagaaccgggagaagaggaagaag
gacgagatcgtgaagactctacagacacgtccggagcctgacagctcggagtgggagctg
atccgccatgtgacagaggcccaccaccacaccaacgcgcagggctcccactggaaacag
aaacgcaagttcctgcctgaggacataggtcagtcccccggggctcccaccccagacgga
gacaaggtagacctggaggccttcagcgagttcaccaagatcatcacccctgccatcaca
cgcgtcgtcgactttgccaaaaaactaaccatgttctcagagctgccttgtgaggaccag
atcatcctattgaaaggttgctgtatggagatcatgtcgcttcgtgccgccgtgcgctac
gacccagagagcgagacgcttaccctgagcggcgagatggcggtgaagagggagcagctg
aagaatggcgggctgggcgtggtgtcggacgccatctttgatttgggcaagagtctggcg
cagtttaacttggacgactcggaggtggccctgctgcaggctgtgctcctcatgagctca
gatcgctctggcctgacatcggtagataagatcgagaagtgccaggagacgtacctgctt
gccttcgagcactacatcaaccaccgcaagcacaacattccccacttctggcccaagctg
ctgatgaaggtgacggatctgaggatgatcggggcgtgccacgccagccgcttcctccac
atgaaggtggagtgtcccaacgaactcttccctccgctcttcctggaggtcttcgaggac
caggaagtatga
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