KEGG   Oncorhynchus nerka (sockeye salmon): 115145256
Entry
115145256         CDS       T07952                                 
Name
(RefSeq) LOW QUALITY PROTEIN: ataxin-2-like protein
  KO
K23625  ataxin 2/2L
Organism
one  Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:one00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:one03019]
    115145256
Messenger RNA biogenesis [BR:one03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     115145256
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 115145256
NCBI-ProteinID: XP_029542543
LinkDB
Position
LG17:28414510..28443874
AA seq 982 aa
MSFRRQNQQPGSGGRKTSNGTAGPAALPSHISGSNANRAVPGRTRNTMKPPSQSSPVFEG
VYNNTRMLHYLTAVVGSTCDVRVKSGNVYEGIFKTLSSRCELVVDAVHKRSEGGEADGDG
GGGLPPSLPRIEEITDTMIFSPGDLVTMTCRDVDLNYAIRDAFTDTAISSSRVNGEHREK
VLQRWDGGDSNGEGFDLETDTSNGWDASEMFKFNEETYGVTSTYDSSLSMYTVPLERGSS
DGFRQREARAARLANEIEGSPQYRHRTNLENDDKSEEDKYSAVVRERDEGRERGSPGFQS
SAGSRDGKYIPLPQRAREMGVPPSSLRGGASGPIPNRTGVPGSSRPSQGSDRCSPLSIRG
AYSPHQSQASPPGQPSSPTPSSSSHPIPHSISQPQALADTSRSSVNGVSSRTSPKAQRSV
QTNRTLRNPSSQSSPAVSRSPKPDDPALAGPSYLDTSSSSIASGPTPLFTVDVNEILSSA
AKERTEGPASPQDGKSGKVPSVLQRTQLEELRKFGKEFRLQPSPSSAGPTSSDSAQPSPS
DSATTAESVPAPGHTPSQDPQSGEGSSFTLTPTTPTPSPAPNTASQSSGPDRQTPQPARS
PGSEEEEGSERAEGVADQVKKSTLNPNAKEFVFKAPMTLVKPSPAPTPPRPTPPSPSVVL
QPPPGQQAIYSTPYLSYLSPVQIQGHSVQAPQMYQYTMSSVQQGKYPRSKGQVVGPRPDH
HGSSQPQMLQAAASAAGPPLVASPYPQAYLQYSQVIQGMPHYPGQPVYSMLQGGARMLTQ
AGHPQAMGPQYPGQTEGPPGPQQAMYASQQFSHHSSSMHPPQPSSTPTGSQPPPQHTAPS
PGHGQSGQGGPQPQSMYHSGPLPAPTPPNMPPGHSSPQASYPMQGYSLPTHQPMAQHYPG
LGQLTQAHVAQGMSGPHHPGGHGPPQMMLHYAPPPQQGPGSAQQHGPPPQQGAHQHYYIQ
HPQAVQVQAHPTQQLSFHPPGN
NT seq 2949 nt   +upstreamnt  +downstreamnt
atgtcctttcgtcgacagaaccaacaacccggttcaggcggacgaaaaacctccaatgga
acggcagggcctgccgctttgccctctcatatcagcgggagcaatgccaacagagctgtg
cctggaaggacaagaaatacaatgaagcctccatctcaatcctctcccgtatttgaaggt
gtctacaacaacaccaggatgcttcactatctcacagctgtagtgggctccacctgtgac
gtccgagtgaagagtggaaatgtgtatgaaggcatcttcaagaccctcagctcaaggtgt
gagctggtggttgacgctgtccacaagcggagcgaaggaggagaggcggatggagatgga
gggggaggcttgcctccctccctgcccaggatcgaggagatcacagacaccatgattttc
agccccggcgacctggtcacaatgacttgccgagatgtggacctcaactacgccatcaga
gatgctttcacagatacagcaatcagctcatcgcgggtgaacggggaacaccgggagaag
gtgctgcagaggtgggacggaggggacagcaatggagaaggcttcgacctggagacggac
acgtctaatggctgggatgccagcgaaatgttcaagtttaacgaggagacatatggcgtc
acgtccacctacgattccagcctctccatgtacactgttcccctggaaaggggcagctcg
gatggcttccgacagagggaggcacgtgcggcccgcctagcgaatgagattgagggcagt
ccccagtaccgtcaccgcaccaacctggagaacgacgataagagtgaggaggacaagtac
agtgccgtggtccgagagagagacgaggggagggagaggggcagccctggattccagagc
agtgccgggagcagggacggtaaatatattccgcttccccagagggccagggagatgggc
gtcccccccagcagcctgaggggaggagcctctgggccaatacccaatcgaacaggagtc
cccggctcctctagaccatcccagggttcggataggtgcagcccgctgtcaatcaggggc
gcctactctccccaccagtcccaagccagccccccgggccagcccagtagccctaccccc
tcttcttcctctcacccgatccctcactccatctctcaaccacaagctctggctgatacc
tcgcgctcttctgtcaacggagtgtcatccagaacttcccccaaagcccagagatccgta
cagaccaatcgaactctgcgcaacccaagctcccagtcctcacctgcagtctctcgctct
ccaaaaccagacgaccccgctctggctggcccttcctacctggacacttcctcctcctcg
atcgcctctggccccacccctctgttcactgtggatgtgaatgagatcctaagctcagcg
gctaaggagaggacagaaggcccagccagccctcaagacggcaagagcggcaaagttccc
tcagtcctgcagagaacacagttggaggagctacggaaatttggcaaagagttcaggctc
cagcccagcccctcttctgctggccccacctcctcagactccgcccagccctccccatca
gactccgccaccacagcagagtccgtacccgcccctggccacaccccctcccaggacccc
caatctggagaggggtcctccttcaccctgacccccaccacccctaccccctctccagcc
cccaacaccgcctctcagtcatcaggaccagacagacagacaccccagccagccaggtcc
cctggcagcgaggaggaggagggcagcgagcgagcagagggtgtggctgatcaggtgaag
aagtctacgctgaaccccaacgccaaagagttcgtcttcaaggcacccatgacgctggtg
aagccgtccccagcccccacccccccgcggcccactcctcccagcccctctgtggtgctc
cagcctcccccgggacaacaggccatctacagcaccccctatctgtcctacctctccccc
gtacagatacagggacactctgtacaggctcctcagatgtatcagtacaccatgtcttca
gtccagcaggggaagtatcccagatctaaaggccaggtggtaggccctcgtccggaccac
cacggctcttcccagccccagatgctccaggctgcagcgtctgcagcaggccctcccctg
gtggcctccccctacccccaggcctacctgcagtacagtcaggtcatccagggcatgccc
cactaccccggacagccggtgtactccatgctgcagggtggggccaggatgctgacccag
gcgggccacccccaggctatgggccctcagtaccccggacagacagagggtcccccggga
ccacaacaggccatgtatgcctcccagcagttctcccaccattctagctccatgcacccg
ccccagccctccagcacccctactgggagccagccccctccccagcacactgcccccagc
cctgggcacggacagtcgggccagggaggcccccagccccagtccatgtaccactctggg
cccctgccagcgcccacaccccctaacatgccccctggccacagctctccccaggcctct
taccccatgcagggctacagcctgcccacccaccagcccatggcccaacactaccccggc
ctgggacagctcacacaggcccatgttgcccaaggtatgtctggccctcaccacccagga
ggccacggcccgccccagatgatgctgcactatgctccacccccacagcaaggcccaggc
tcagcccagcagcatggccctcccccccagcagggggcgcaccaacactactacatccaa
catccacaggctgtacaggtgcaggctcaccccacccagcagctctccttccacccccct
ggaaactga

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