Oncorhynchus nerka (sockeye salmon): 115145278
Help
Entry
115145278 CDS
T07952
Name
(RefSeq) rho guanine nucleotide exchange factor 18-like isoform X1
KO
K21066
A-kinase anchor protein 18
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115145278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115145278
Membrane trafficking [BR:
one04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
115145278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
PH_13
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
115145278
NCBI-ProteinID:
XP_029542577
LinkDB
All DBs
Position
LG17:29339760..29411896
Genome browser
AA seq
817 aa
AA seq
DB search
MSISCKQNRLTILQDGFLKDYLHWTSATTSPNLARRERDKSSLAPEGPSGSPKVPDMTLS
PRRPSAQPAASSSSSSSNSHTAAASLNLNHCHNSSSGSLPGDMDEMDSLRFGIKRFNEYA
VSLTPSTPGSIIVEDAYYSAVQADLESDAQDLDVESWSLAVDQQYLKKHTKEMVKRQDVI
YELMQTEMHHVRTLKIMLRVYVRELKEHLQMDVRCLDCLFPRLESLLELHTHFLSRLKER
RRVATQLSSDKNYNIQRLADILTTQFSGEIGERMKESYGDFCSRHTEAVSYYKEQLHNKK
FQNLIRKINNLSIVRRLGVTECILLVTQRITKYPVLVERIVQNTEVGTEEHEELTRSLGL
IKDCIVHVDAQVNLHQKASRLRDIAHKMEPKSLGKIKDGHVFRGEDLALGRRRLLHDGTV
NHKAASGRLKDILAVLLSDVLLLLQEKDQRYVFSTVDNKPSVISLQKLIVREVAHEEKAM
FLICASPNEPEMYEIHTASKEERKTWMTHLRQAVESCRHTERLFSEEEARAPKFKEFQDS
LSQKDGQIVAGLTEKLQLFADMAESVAGLEDIASRSHLLLRGDASDLHQGETLLKGAITE
VENLQNLLLSGVTELVPRPEEVLGSGAMPRKADTFEGYDSSPTILNKKGSVKKKNYSGGD
KARDRSQRACSDTQLKEIQALEQPPAIITQQDRHIKLQRSSLTERASFPGRHRGNVLMEQ
EKQRMLALQREELASFHKLQLLHRQEQARWESERERHRLQAEAAEDSLRQREEECRRLEE
KREELERQREMYQQDLERLRESTLNVKKERLGQDNRD
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatatcatgtaaacaaaaccgattgaccattttgcaggatggatttctgaaagat
tatctgcattggacctctgcaaccacctctcctaacctagcccggagggagcgggacaag
tcctcgctggcccctgagggcccctccggctcgccgaaagtcccagacatgaccctcagc
ccacggagacccagtgctcagcctgctgcctccagcagctcttcctccagcaacagtcac
actgctgcagccagcctcaacctcaaccactgccacaacagcagctctggatccctccca
ggggacatggacgagatggacagcctccgcttcgggataaagcgcttcaacgagtatgcg
gtgtccctgaccccttccacccctggctccatcatcgtagaggatgcatactactctgca
gttcaagctgatctggagtcagatgcccaggacttggatgtggagtcatggagcctggct
gtggaccaacagtacctgaagaaacacaccaaggagatggtcaagagacaggacgtcatc
tacgagttgatgcagacagagatgcatcacgtacggaccctgaagatcatgttgcgtgtg
tacgtgagggagctgaaagagcaccttcagatggatgtgcggtgtctggactgtctgttc
ccgcgcctggagagcctactggagctacacacacacttcctgtcccgcctcaaagagcgg
cgccgagtcgccacgcagctcagcagcgacaagaactacaacatacagagactcgctgac
atcctcaccacacagttttcaggtgagataggggagcggatgaaggagagctatggtgat
ttctgtagccgccacacagaggctgtcagctactacaaggagcagctgcacaacaagaag
ttccaaaacctcatacggaaaatcaacaatttgtcaattgtgagaagattgggagtgaca
gagtgtattctcctggtgacacagcgcatcacgaagtacccagttctggtggaacgcatt
gtccagaacacagaagtgggcacagaggagcatgaggagctgacgaggtctctgggtctg
atcaaagactgcatcgtccacgttgatgcccaggtcaacctccatcagaaggcctcgcgt
ctccgagacatcgcccacaagatggagcccaagtctctgggcaagatcaaagatggccat
gtgttccgcggagaggacctggccctgggcagacgcaggctgctgcacgatgggaccgtc
aaccacaaggctgcctctggcagactcaaagatattcttgctgtgctgctgtcagatgtt
ctgttgttactccaagagaaagaccagagatatgtcttctctactgtggacaacaagcca
tcagtgatctccctccagaaattgattgtgcgggaggtggcccatgaggagaaggccatg
ttcctaatctgtgcctcccccaatgagcctgagatgtacgagatccacaccgcctccaag
gaggagcgcaaaacctggatgacacacctccgccaggcagtggaaagttgtcgacacaca
gagaggctcttcagtgaggaggaggctcgagcccccaaattcaaagagttccaagatagt
ctgagccagaaggatggccagatcgtggcaggtctgacagagaagctgcagctgtttgca
gacatggcagagtccgtggctggtcttgaggatatcgcctcacgctcccatctgctgctg
cgtggtgacgcctcagacctccaccagggggagacgctgctcaagggagccatcactgaa
gtggagaaccttcagaacctgttgttgtctggtgtgacagagctagtgccacgtccagag
gaggtgttagggtccggggctatgcccaggaaagcagacaccttcgagggctacgacagc
agccccaccatcctcaacaagaaaggcagtgtgaagaagaagaactacagtggcggggac
aaggccagagacaggagccagagagcctgctctgacacccagcttaaggagattcaggcc
ctggagcagccaccggccatcatcacccagcaagaccgccacatcaagctgcagcgcagc
tccctcactgagcgtgcctccttccctggccgtcaccgtggcaacgtgctcatggagcag
gagaaacagaggatgctggccctgcagagggaggagctggccagcttccacaagttgcaa
ttactgcaccgacaggagcaggctcgttgggagagcgagcgggagcgccaccgattgcag
gcagaggccgcagaggacagtctgaggcagagagaggaggagtgcaggaggctggaggag
aagagagaggagctggagagacagagggagatgtaccaacaggatctggagagactgagg
gagtcgaccctcaacgtcaagaaggaacgcctggggcaagacaatcgagactaa
DBGET
integrated database retrieval system
