Oncorhynchus nerka (sockeye salmon): 115145317
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Entry
115145317 CDS
T07952
Name
(RefSeq) pre-mRNA-splicing factor 38A-like
KO
K12849
pre-mRNA-splicing factor 38A
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115145317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115145317
Spliceosome [BR:
one03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
115145317
Complex C
U4/U6.U5 tri-SnRNP related factors
115145317
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Wap1
Motif
Other DBs
NCBI-GeneID:
115145317
NCBI-ProteinID:
XP_029542661
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All DBs
Position
LG17:complement(32868894..32872823)
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AA seq
308 aa
AA seq
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MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMALKFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGTSVDCYKYL
EPLYNDYRKIKSQNRNGEFELQHVDEFIDELLHSERMCDIILPRLQKRQVLEEAELLDTR
ISALEEDLDEVETSDEEDEEEEKTERVQTPEPHRRSYRDNDRPRRSPSPRYRRSSRSPRR
RSRSPKRRSPSPRRERHRSKSPRRHRSRERRHRSKSPGHHRSHRHRSHSKTPERSSKKSH
KKSRRGNV
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataggacggttaaagatgccaacagtatacatggaacaaatccacaatacttg
gtagagaaaattattcgtactcgaatctatgaatcaaaatactggaaagaagaatgcttt
ggactgacggctgagcttgtcgttgacaaagccatggcgctgaagtttgtcggtggagtt
tatggcggaaatatcaaacctacaccgttcctgtgtctcactctgaagatgctgcagatc
cagccagagaaagacatcattgtagaatttatcaaaaacgaggatttcaaatatgtccgc
ttgcttggcgccatgtacatgaggttgactgggacatcagtggattgctacaaatacctg
gaaccactgtacaacgactacagaaaaatcaagagtcagaaccgaaatggggagtttgag
ctgcaacacgtggatgagtttattgatgaactgctacactctgagagaatgtgtgacata
atccttcccaggcttcagaaaaggcaggttcttgaggaggcggagctgttagacacgcgc
atcagtgccctggaagaagacctggatgaggtggagaccagcgacgaggaagatgaggaa
gaggagaagacagagagagttcagaccccagagccccacagacggagttaccgagacaac
gatcggcctcgccgctcgccctctccacgctacagacgcagcagtcgttcacccagacgg
aggagccgatcacctaagagacgaagcccatcccccagacgagaacgtcaccgcagcaaa
agcccccgtcgccaccgctcccgagagagacgtcaccgctcaaagtccccagggcatcac
agaagccacaggcatcgcagtcactccaaaaccccagagaggagttcaaaaaagagccac
aagaagagtcgaagaggaaatgtgtga
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