Oncorhynchus nerka (sockeye salmon): 115145344
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Entry
115145344 CDS
T07952
Name
(RefSeq) putative tyrosine-protein phosphatase auxilin isoform X1
KO
K09526
DnaJ homolog subfamily C member 6
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115145344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115145344
03110 Chaperones and folding catalysts [BR:
one03110
]
115145344
04131 Membrane trafficking [BR:
one04131
]
115145344
Spliceosome [BR:
one03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115145344
Chaperones and folding catalysts [BR:
one03110
]
Heat shock proteins
HSP40 / DNAJ
115145344
Membrane trafficking [BR:
one04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
115145344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTEN_C2
DnaJ
Y_phosphatase
Motif
Other DBs
NCBI-GeneID:
115145344
NCBI-ProteinID:
XP_029542698
LinkDB
All DBs
Position
LG17:34657644..34726253
Genome browser
AA seq
998 aa
AA seq
DB search
MSLLGGYKKKTCSYDGYESLQLVDSSGNFNNGGGRGSGIGGGSVAATLGGPKAGPLREDD
CSTMDSSGPPSPDMDANYGGGLLDMVKGGAGKFFSNFKDNLKDTLKDTSTKVMHQVATYT
KGELDIAYITSRIIVMSYPAEALQIGNQNHVEDIRSFLDSRHADHYTVFNLSQRNYRGAK
FSNRVSECNWPPRQAPSLHNLFAVCKNMHNWLKQNPKNVCVITCSDGRAPSGVLVCAMFC
FCHLFSNPVPAMQLLSAKRPGSGLWPSHRRYIGYVCSMVSEKPSLPHSKPLVVKAVTMSP
VPCFNKQRIGCRPFCEVLIGETKIFSTAQDYERMREHRVQDGKVVFPLGVNVQGDVVISV
YHMRNTIGGRLQAKVSNTQILQIQFHTGFIAPGTSVLKFTKPELDACDSPEKYPQLFHVL
VDIEVEGTDKQKDLTPPWEQFPNKDLIPNVLFSCHQEHQDALAIADEMEGLDLEEPSRSH
SGSDSRPHGEDSEPSDDEMLSLSSQQSNASGERHGGAQAGPRGPKRPEQPQALATAPPPP
EEMDLLGLDGAAVNAPCPKPQPPTTNTTTDLLGDLFGASPQPPPGSGPASAQSTPQKIAP
PSTSPCPSPAFDPFGAGPMPKPQELMGSFRGPAGNLGNRGLPAPLLHAARSPSPTMQNTG
KGRSSPVPPTTPVVTIQQPPNAMGGWDWNKSAAPGGGFGMGSRSASTSPTGSVHSTPTHQ
VNPKTLDPFADIGNLGGSLGGGSGFSSKPTTPTGTTPAFPPMGSPSRPPPSPQHGGGWQA
NTGFPSWQPGGGGGGGQAGWQPQPQGQGGPPSQPKPSPSHSMPHTSPSNRPNYNISFSAM
GGGAAPNAAGKPQPNMGTKPKVATANFDDLLSGQGFAGAKKKEGPRTIAEMRKEEMAKEM
DPEKLKILDWIEGKERNIRALLSTMHTVLWEGETRWKPVGMADLVTPEQVKKVYRKAVLV
VHPDKATGQPYEQYAKMIFMELNDAWSEFDSQGQKALY
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgagcctactgggtggctataagaaaaagacctgcagttacgatggctatgaatcttta
cagttggtcgatagcagcggtaacttcaataacgggggagggagaggcagcggaatcggc
ggcggctcggtagcagcaaccctaggaggaccgaaggcaggcccactgcgcgaggacgac
tgcagcaccatggacagctcaggtcctccatctccagatatggatgccaactatggcgga
gggctgctggatatggtgaaaggcggagccggcaagttcttcagcaacttcaaggacaac
ctgaaggacacactcaaagacacctccactaaagtcatgcaccaggtggccacgtacaca
aaaggagagctggacattgcctacatcacatcacgaatcatagtgatgtcatatcctgcg
gaggcgttgcagatcggcaaccagaaccatgtggaggacatccgctctttcctggactca
cggcacgctgaccactacaccgtcttcaacctgtcacagcgcaactatcgcggcgccaag
ttctccaaccgggtctcggagtgtaactggccgccccgccaggctcccagcctgcacaac
ctgtttgcggtgtgtaagaacatgcacaactggctcaaacagaaccccaagaatgtgtgt
gtcatcacctgctcggatgggcgtgctccctcgggtgtgctggtctgtgccatgttctgc
ttttgccacctcttcagcaacccagtgcccgccatgcagctactcagcgccaagagaccc
ggctcaggcctctggccctcgcaccggaggtacataggctatgtgtgcagtatggtatca
gagaagccctccctgccccactcaaagcccctggtggtcaaggcggtcaccatgagtcca
gtaccctgcttcaacaaacaacgtatcggctgcagacctttctgtgaggtcctcataggg
gagactaagatcttctctacggcacaggactatgagaggatgcgagagcacagggtccag
gatgggaaggtggtcttccctctaggtgtgaatgtccagggtgatgtggtcatctctgtc
tatcatatgagaaacaccataggaggacgactgcaggccaaggtgtccaacacccagata
ctccagatccagttccacacaggcttcatcgctccagggacgagcgtgttaaagtttaca
aagccggagctggatgcgtgtgactctccagagaagtacccacaactgttccatgtgttg
gtggacattgaggtggagggtacagacaagcagaaggacctgacccctccctgggaacag
ttccctaataaagacctgatccccaacgtactgttctcatgtcaccaagagcaccaggac
gccctcgccatcgcagatgagatggagggactggacttggaggagccaagccggtcccac
agtggttcagacagtcgccctcacggggaggacagtgagccgtctgatgatgagatgctg
tccctgtccagccagcagagcaacgctagcggagagcgacacggaggggctcaggctggc
cccaggggccccaagagaccagagcagcctcaggccctcgccactgctcctcctccccca
gaagaaatggacctcctgggcctggatggggctgctgtgaacgccccctgccccaaaccc
cagccccccaccaccaacaccaccacggacctcctgggggatctgtttggagcctccccc
cagcccccacctgggagtgggcccgcctcggcccagtccaccccccagaaaatagcccct
ccctccacctccccttgcccctccccagcattcgacccatttggggcgggtccgatgccc
aagccccaggagctgatgggttccttccggggtccagcaggtaaccttggtaaccggggg
ctgcctgcccccctcctgcatgcagctcgctctccgtcccccactatgcagaacactggc
aagggacggagctccccagtcccgcccaccacccctgtggtcaccattcagcagcctccc
aacgccatgggaggatgggactggaacaagtctgcagctccaggagggggttttggtatg
ggcagtaggtcagccagcaccagccctaccggatcagtccatagcacccccacacaccag
gtcaatcccaagaccctggacccattcgctgatattggaaacctggggggcagtctggga
ggaggctctggcttctccagtaagcctaccacccctacaggcaccacccctgccttccca
cccatgggctccccttcacggcctcctccctcgccccagcacggtgggggctggcaggct
aacacaggcttcccctcgtggcagcccggtggtggcggtggtggagggcaggcagggtgg
cagccccaaccccagggtcagggtggcccaccctcccagcccaaacccagccccagccac
tccatgccgcacacctccccctccaacagacccaactacaacatcagtttctctgccatg
ggaggaggggctgctcccaatgcagccgggaaaccacagcccaacatgggtaccaagccc
aaagttgcaacggctaacttcgatgacctgctgtctggccaaggttttgctggagccaag
aagaaggaaggtcccaggacaatagcagagatgaggaaggaggagatggctaaagagatg
gaccccgagaaactcaagattctggattggatcgaggggaaggagcgtaacatccgggcc
ttgctgtccaccatgcacacggtgctctgggagggggagacccgttggaagcctgtaggc
atggctgacctggtgaccccagagcaggtcaagaaggtttaccgcaaagccgtgctggtg
gtccatccagacaaggccacgggacagccctatgaacaatatgccaagatgatttttatg
gaactgaatgacgcctggtcagaatttgacagccaaggacagaaagcactctactga
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