KEGG   Oncorhynchus nerka (sockeye salmon): 115145367
Entry
115145367         CDS       T07952                                 
Name
(RefSeq) protein mago nashi homolog
  KO
K12877  protein mago nashi
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03013  Nucleocytoplasmic transport
one03015  mRNA surveillance pathway
one03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115145367
  09122 Translation
   03013 Nucleocytoplasmic transport
    115145367
   03015 mRNA surveillance pathway
    115145367
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:one03019]
    115145367
   03041 Spliceosome [BR:one03041]
    115145367
Messenger RNA biogenesis [BR:one03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     115145367
Spliceosome [BR:one03041]
 Complex C
  Other components
   EJC/TREX
    115145367
SSDB
Motif
Pfam: Mago_nashi
Other DBs
NCBI-GeneID: 115145367
NCBI-ProteinID: XP_029542738
EnsemblRapid: ENSONEG00000017702
LinkDB
Position
LG17:36338887..36342695
AA seq 147 aa
MSTSDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEE
LKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGL
RVFYYLVQDLKCLVFSLIGLHFKIKPI
NT seq 444 nt   +upstreamnt  +downstreamnt
atgtcaacgagtgacttttatttgagatattatgtcgggcacaagggaaagtttggacac
gagttcttggaatttgagtttagaccagacggtaagctgagatacgcgaacaacagcaac
tacaagaatgatgtcatgatcaggaaagaggcgtacgtacacaagagtgtgatggaggaa
ctaaagaggatcatagatgacagtgagatcaccaaggaagatgatgcactgtggccaccc
ccagacagagtgggcagacaggagctggagatcgtcattggggatgagcacatttccttc
acaacttccaagattggttccttgattgatgtcaaccagtcgaaggacccagaaggcctc
cgcgtgttctattacctggtccaggatctgaaatgtcttgtcttcagtctcattgggcta
cacttcaagatcaagcccatctaa

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