Oncorhynchus nerka (sockeye salmon): 115145592
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Entry
115145592 CDS
T07952
Symbol
traip
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115145592 (traip)
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115145592 (traip)
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115145592 (traip)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-RING_11
zf-RING_Vps41
zf-C3HC4_4
zf-RING-like
Gp58
RING_XB3-XBAT31
MAD
zf-RING_16
WEMBL
Zn_ribbon_8
Uds1
Crescentin
Fez1
zf_RING_Vps8
KxDL
T3SSipB
RINGv
Aminoglyc_resit
ATG14
Baculo_PEP_C
zf-Nse
SLX1_C
AAA_13
Motif
Other DBs
NCBI-GeneID:
115145592
NCBI-ProteinID:
XP_029542949
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All DBs
Position
LG2:28879536..28884940
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AA seq
455 aa
AA seq
DB search
MPIRAYCTICSDFFDHSRDVAAIHCGHTFHYECLLQWFQTAPNKTCPQCRKQVSTRHIIN
KLFFDIGGEGEGSSADPECLQNELDRMKAVLSTKERDWRDRLKMVEGLKETVDRQKKDLD
IVRKEIGEKDMLCSVLRKQMKYLENQQSETQAAKEEARRLRTKMKTYESLDVVLQGQRAE
VESMISDMGVGQAAMEELSIYCISLKKEYENLKGSLRYSNEMSEKLKREVFASNNKLQKA
TMEMNRTNDDMKAVQNDLTNADKEITSLKKKVEILQKTLSTPTRTNEALSRLVFESPAPV
QLQQPRLHQPANSEDIDLNMTFDITTPDLVDKRASQVPSKKMRLDPATLSSSPTKHSDSA
SFGSKAREEEVPMGTFFRNSILFRKKTFGSMLDPQRSKLGAIRSGYDGLGGRTKFFQPSP
LSDIRPLMMKAKRKKVSRPAPPKISTCLTLDSYLE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgcctattcgtgcctactgtaccatctgttccgatttcttcgatcactccagagatgtg
gctgccatacactgtgggcacaccttccactatgaatgtcttcttcagtggtttcagact
gcccccaacaagacatgtccacaatgtagaaaacaggttagcaccagacacattatcaac
aagttgttctttgacattggtggtgaaggagagggatcctctgcggatccagagtgtttg
cagaacgagctcgatagaatgaaagctgttttaagtaccaaagagagagactggagggac
agactgaagatggtagagggcttgaaggagactgttgacaggcagaagaaagacctggac
attgttaggaaggagattggcgagaaagatatgctctgctcagttctcaggaaacagatg
aaatacctggagaaccagcagagtgagactcaggctgctaaggaggaggcccgacgactc
aggaccaaaatgaaaacatatgagagtctggatgtggtgttacagggtcagagggctgag
gtggaatccatgatcagtgacatgggtgttggccaggctgccatggaggagctctccatc
tactgcatctctctcaagaaagagtatgagaacctaaaagggagcctcagatattcaaat
gaaatgtctgaaaagctcaaaagggaggtgtttgcttcaaacaacaagttgcagaaagcc
acaatggagatgaacaggaccaatgatgacatgaaagctgtccaaaatgacttgaccaac
gcagacaaagagatcactagtctgaagaaaaaagttgagattcttcaaaagaccctgagc
acaccaacccgcactaacgaagcattgagcagactagtctttgagagccctgccccagtg
cagctgcaacagccccgtctccaccagcctgccaacagtgaggacattgaccttaacatg
acatttgacatcaccacacctgacctggtggataagagggcgtcacaggtcccatccaaa
aagatgcgtctggatccagccacgttgtcgtcctcgccaaccaaacacagtgacagcgcc
tcgtttggaagcaaggccagagaggaggaggtgccaatgggtacattcttccgtaactcc
attctgttcaggaagaagacctttggcagcatgctggacccccagaggagtaaactggga
gctatcagaagtggttatgatggacttggagggagaaccaaattcttccaaccttctcct
ttgtcagatattcgcccgctcatgatgaaggcaaagagaaaaaaggtttcccgaccagct
cctcccaagatctccacctgtcttactctggacagttatctggagtga
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