Oncorhynchus nerka (sockeye salmon): 115145809
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Entry
115145809 CDS
T07952
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00061
Fatty acid biosynthesis
one00071
Fatty acid degradation
one01100
Metabolic pathways
one01212
Fatty acid metabolism
one03320
PPAR signaling pathway
one04146
Peroxisome
one04216
Ferroptosis
one04920
Adipocytokine signaling pathway
Module
one_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
115145809
00071 Fatty acid degradation
115145809
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
115145809
09143 Cell growth and death
04216 Ferroptosis
115145809
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
115145809
03320 PPAR signaling pathway
115145809
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
one01004
]
115145809
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115145809
Enzymes [BR:
one01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
115145809
Lipid biosynthesis proteins [BR:
one01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
115145809
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of breast milk
115145809
Exosomal proteins of breast cancer cells
115145809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
GSG-1
Motif
Other DBs
NCBI-GeneID:
115145809
NCBI-ProteinID:
XP_029543213
LinkDB
All DBs
Position
LG18:8206946..8263234
Genome browser
AA seq
699 aa
AA seq
DB search
MQMQAQDLLRQLQIPELEDVCQYMHSLPANILMGVGAIAALTTYWYATRPKALKPPCDLN
MQSVAMTGDGYVRRSILNKNDEHMTHYYSDARTMYEVFLRGMRVSIDRPCLGSRKPNQPY
KWLSYREVADKAECIGSALLHRGHSQTGDKHIGIFSQNRPEWTISELACYTYSLVCVPLY
DTLGLEAIEYIIDQAAISTVICDLVDKVRLILDCVSGKEHTLKTIVIMEAFDKELVVRGQ
QSGIEILSLKDVEAVGKAHHHQPLPPTPDDLALICFTSGTTGNPKGGMLTHGNVIANCAA
FIKITEVHCMLNLHDIHMSYLPLAHMFERVVEGVILIHGARIGYFQGDIRLLMDDLKTLQ
PTVFPVVPRLLNRMFDKIFGQANTPLKRWLLDFASRRKLAEMMNGVVRKDSLWDKLIFQK
VQNNLGGRVRLMITGAAPVSPTVLTFLRAALGCQFYEGYGQTECTAGCTMSVPGDWTAGH
VGAPLPCNYVKLADVTEMNYFAANGEGEVCVKGPNVFKGYLNDPEKTKEVLDQDGWLHTG
DIGKWLPNGILKIVDRKKNIFKLAQGEYIAPEKVENIYIRSDPVAQIFVHGDSLQACLVG
IVVPDPDFLPGWAKKKGIEGSYLEMCASKELKNAILEDILRLGKEGGLKSFEQVRDISLH
TEMFSVQNGLLTPTLKAKRTDLRSHFQEQIDLLYAKIKM
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgcagatgcaagcccaggacctcctgagacagctgcagatcccagagctggaggatgtg
tgccagtacatgcacagcctgcccgccaacatcctgatgggcgtgggcgccattgccgcc
ctcaccacctactggtacgccacacggcccaaggccctcaagccgccctgcgacctcaac
atgcagtcagtggccatgacgggtgatggttacgtcaggcgttccattctgaataaaaac
gacgagcacatgactcactactacagtgacgcacggaccatgtacgaggtattcctccga
ggcatgcgggtgtccattgataggccctgtctaggatcaagaaaacccaaccagccttac
aagtggctgtcataccgagaggtggcagacaaagcagagtgcattggctcagctcttctc
cacagagggcactcccagactggagacaagcatatcggcatcttttcccagaacaggcca
gagtggaccatttcagagctggcctgttacacatactccctggtgtgtgtaccactgtat
gacacgctaggcctcgaggccattgaatacatcatcgaccaagctgccatctctacggtg
atctgtgacttggtggacaaagtgcggctcatcctggactgcgtgagcggcaaggagcac
acattgaagacaatcgtgatcatggaggccttcgacaaggagcttgtggtccgcggacag
cagagcggcatcgagatccttagcctgaaggatgtggaggctgttggcaaagcccaccac
caccagccattacccccaacaccagatgacctggcactcatctgcttcactagtggaacc
acaggaaacccaaagggtggaatgcttacacatggcaatgttatcgccaattgtgctgct
ttcatcaagataacagaggtgcactgcatgctgaacctccacgacattcacatgtcctac
ctacctctagcacacatgtttgagagggtggtggagggagtgatcctgattcacggtgcc
cggattggctactttcagggggacatccggctcctgatggacgacctgaaaaccctgcag
cccacagtcttccctgtcgtcccccgcttgctcaaccgcatgtttgacaagatcttcgga
caggccaacacgccactgaagaggtggctgctggattttgcctccaggaggaagcttgcg
gagatgatgaatggtgtggtcaggaaggacagcttgtgggacaagctcatcttccaaaaa
gtccagaacaatcttgggggtcgtgtgaggctgatgatcacaggagcggccccagtttct
ccaaccgtcctgacgttccttcgtgccgcacttggctgccagttttacgaaggctatggt
cagactgagtgcacagctgggtgtaccatgtccgtgcctggggactggacagcaggtcat
gtgggggctccactgccttgcaactatgtaaagctggcagacgtgactgagatgaactac
tttgctgccaatggggaaggagaggtgtgtgtaaaaggaccaaacgtattcaagggctac
ctgaatgacccggagaagacgaaggaggtcttggatcaggatggctggctccacacggga
gacattgggaagtggctgcctaatggcattctgaagattgtggacaggaagaagaacatc
ttcaagctggctcaaggagagtacattgccccggagaaggtcgagaacatctacatccgg
agcgacccggtggcccagatctttgtccatggcgatagcttgcaggcatgcctggtgggc
attgtggtgcctgatccagacttcttaccaggatgggcaaagaagaagggcatcgagggt
tcttatttggagatgtgcgcaagcaaggagttgaaaaatgccattctggaggacattctg
aggctggggaaagaaggggggctgaagtcttttgagcaggtgagagatatctcgctgcac
acggagatgttctctgtccagaacggcctcctgacgcccacgctcaaggccaagaggaca
gacctccgcagtcacttccaagagcagattgacctgctctatgcgaagatcaagatgtga
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