Oncorhynchus nerka (sockeye salmon): 115145956
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Entry
115145956 CDS
T07952
Symbol
cdan1
Name
(RefSeq) codanin-1
KO
K19531
codanin-1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115145956 (cdan1)
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
115145956 (cdan1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Codanin-1_C
Motif
Other DBs
NCBI-GeneID:
115145956
NCBI-ProteinID:
XP_029543524
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All DBs
Position
LG18:17019491..17041031
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AA seq
1425 aa
AA seq
DB search
MLSCFWSALQGNAVATFARLLPFWSAPNSKQQAECQTAPAQTRMAALLESLLQKEVEAIK
AVEWLKHDGDSDSLAWCKPLKIERQEFVPFLLNFLREQSCSTLTHGPATPAKTPSQPRVS
QPSQQGPGFSSEHREGCRSTGPGTGPRSASRVQLFSSTPSLSPGAEWDTTQPPSGSHCLG
GISALSSPSFSSARSPAPASTSRHPPSERRSTQRASLGDFMPSPPELQQHHSLSLGVQQQ
PRGRRRSAGMGGQGRQGGGRGVFQTEEVGPGRSEGGGKKGRGGGANKMGDPAVSPPIAQM
TTLVQLNLTNLEDFPPMGMSHASPALHTKPSRRINPTPVSAERPHSRPKTCFTSTPFSTR
PSSPPPVPEAVTGAIEGSITGALNVSHSLLSLQEERELLKRVKCKRAQQVGSPLPTSLDP
CTPTKSGLRPVSGSKMTPVTQGSCPDPSKVTLTSELDLLADLYCTCISENLVPNVFLELF
FVLQLLTSRTPAVTEEEDKDLSMGTLDVLERGYLSKVHNCVYFSVRVLENQFELVSHLDK
DTLRLLAENERVTCFSPSLRNRLTLAQDPSTAKVLPSVDTFIHSVPFQPATDNRSNFSSD
KAFHTFKKQRDIFYEVLREWEDFHKEPRWEFEAELGNRVRGMVSQLNSTGNHSHFARLFL
KQLVQMCKGPRALGSPGDTPDADLLGMLGADSLGRLKRLEERLIQPQGILGPCPPPAFPG
HQEFFRDFLKTASCCQLNQHLKDSLCQQLLQLDEVSVLAPVVSSTEGEGDMEQQDEKQRF
SSVLLLARLLAKFLGYISFLPYQTSERPSREIQEATANLRSKSMSVLDVCAVLRSCVRRR
RTILTVPWLVEFLSMLDFTGPFLLCYRTVLGLLLSLYRRMVLSREGEVCYLNQLLMVAVL
GWLFQIPVIPEELFFTTDFAVAVELEESQTNVQGLDCLPLVDQQLLYTCCPFLGEFRKLL
AAFVAGSSARGGGLIRKITPTSAELRGTPTTTRSQQKRQVDLEQAFFHNQPPSLRRTVEF
VAERVGSNCVKHMKVTLVCELVRGGERLLREGLISPGANPLILNDSICAQLCDGGQEALE
RATRFCSEKGPEAIRVLLPDETSPAVLTTSENITKRLATEKAYSWLSSNITALVKREWKT
KFDRVMKSLPSPEASGVEGSSLVAKAGAAAVSQEQSRTPKRDMGKEEAVTSCPPDCPHSA
PLPSDVLVEIKEVLSIAVGPRSEKEALTCLQLNALLGKVGDTLSCKKFSFPMPEQMLIRC
TVLLACKLVSGELPMVSPQEECGRTVSPGRTVSPDPVLPESPVQRVGCSIKVLLEQLILL
WGRDCCSSAPLHLLFTEMTLSAVLMASDSQWDNFLFLVRQLVERGILGEEEVVSHWRKLS
QLPWPTEFIEKIQQQSSSTTSLPLPELQNHMDMLQVSPQPVEGAN
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcctgtttctggagcgcgctccagggcaatgcagtagcgacattcgcgcgcctg
ctcccattctggtccgcccccaactccaagcagcaggctgagtgccagacggcgcctgct
cagaccagaatggcggctcttttggaatcgctgctgcagaaggaagtggaagctatcaag
gccgtagaatggctaaaacacgacggggacagtgacagcttggcatggtgtaagccactg
aagatcgaaagacaggagtttgttcctttcctgttgaacttcctgcgagagcagagctgc
tccaccctcacccatggccctgccacacctgccaagacccccagccaacccagggtctcc
cagccctctcagcaggggccaggcttctccagtgagcatagggaaggctgcagatctacc
ggacctggaaccggtcctcgtagtgccagccgtgtacagctattctcctccactccctcc
ctgtcccctggggctgagtgggatactacccaacccccatctggctcccactgcctgggt
gggatcagcgccctcagtagtccttccttcagctcagccaggagccctgctccagcctcc
acctccaggcaccctccctcagagcgccgctccacccagagagccagtttgggggatttc
atgccgtcacctccagagctccagcagcaccacagtctcagccttggggtccagcagcag
ccgcgtggccgcaggaggagtgccgggatgggagggcagggaaggcagggtggggggcgt
ggtgtgttccagactgaggaggtggggccaggaagatctgagggtggtgggaagaaggga
aggggaggaggggctaataaaatgggtgacccagctgtgtcacctccaattgctcagatg
acaacgctggtccagctcaatttaaccaatctggaagacttcccacctatggggatgtct
catgcatcaccagcactgcatacaaaaccatctcggaggatcaacccaaccccagtcagt
gcagagcggcctcactccagaccgaagacctgtttcacttccaccccgttcagcaccagg
ccctccagcccacccccagtcccagaggcagtcactggggccatcgaagggagcatcact
ggggccctgaacgtatcccactctctcctcagtctgcaggaggagagagaactgctaaag
agagtgaagtgtaaacgagcccagcaggtgggctcccctctacccacctctttggacccc
tgtacccctaccaaatcagggctccggccagtatcgggctccaaaatgacccctgtcacc
caggggtcatgtcctgacccctctaaagtcaccttgacctctgaactggaccttctggct
gacctctactgcacctgcatctctgagaacctagttcccaacgtgttcctggagctgttc
tttgtgctgcagcttctgacatctagaacaccagccgtcacagaagaagaggacaaggat
ctaagtatggggacgttagacgtcctggaaagaggctacctcagcaaggtgcacaactgt
gtctacttctctgtcagggtgctggagaatcagtttgagttggtgtctcacctggacaaa
gacaccctgcgtctcttggctgagaacgagagggtgacctgcttctctccgtccctgagg
aacagactgactctggcccaggaccccagcacagccaaggtgttgccctctgtggacacc
ttcatccactctgtcccgttccagcctgccactgacaaccgctccaacttcagcagtgac
aaggccttccacaccttcaagaagcagagggatattttctacgaggtgctgcgagagtgg
gaagacttccacaaggaacctagatgggagtttgaagctgaactaggcaatagggtcaga
ggaatggtgagtcaactgaactccactggaaaccactcccatttcgccagactcttcctc
aagcagttggtgcagatgtgcaaaggtccccgtgctctgggctccccgggcgacaccccc
gacgcggacctgctaggcatgctgggagcagacagcctggggcgtctaaagcgtctggag
gagcgtctgatccagccccaaggcattctgggaccctgtcctccacccgccttcccggga
caccaggagttcttcagggacttcttaaagaccgcaagctgctgccagctgaaccagcac
ctgaaggacagtctgtgtcagcagctcctccagcttgacgaggtgtccgtcctggctccc
gtggtctccagtaccgagggagagggagacatggaacaacaagatgagaagcagcgtttc
tcctctgtcctgctgttggctcgtctcctagctaagttcctgggttatatctccttcctg
ccataccagacctctgagaggccctccagggagatacaggaggctactgccaatctccgc
agcaagagtatgtctgtgctggatgtgtgtgcggtcctgcgtagctgtgttcgtaggaga
cggaccatcctgactgtgccctggctggtggagttcctctccatgctggacttcaccggt
cccttcctcctctgctacaggaccgttctgggactgctgctcagcctatacaggcggatg
gtgctgtccagggaaggagaggtgtgttacctgaatcagcttctcatggtggctgttcta
ggctggctgttccagatcccagtgatcccggaggagcttttcttcactactgatttcgct
gtagctgtcgagctagaggagagccagaccaacgtccagggacttgactgtctccccctg
gtggaccaacagcttctctacacctgctgtcctttcctgggtgagttccgtaaactcctc
gctgcctttgtggccggtagctctgccaggggtggaggcctcatccgtaagatcacccct
acctctgctgagctgagaggtacccccaccaccaccaggtcacagcaaaaacgacaggtg
gatttggagcaagccttcttccataaccagcctccatctctcagacgaacggtggagttt
gtagctgagagggtgggatccaactgtgtcaaacatatgaaggtcacgctggtgtgtgag
ctggtccgtggtggagagaggttgctgagggaggggctgatctcaccaggggccaaccct
ctgatactcaacgactccatctgtgctcagctctgtgacgggggccaggaggctctggag
agagctaccaggttttgcagcgagaagggtccagaagccatccgggttcttcttcctgac
gagacgtctcccgctgttctcactacatctgagaacatcaccaagcgcctggccactgag
aaggcctatagctggctctcctccaacatcacagccctggtcaagcgagagtggaaaaca
aagtttgaccgtgtgatgaagtctcttcccagcccagaggctagtggtgtggaaggttct
agtcttgtggctaaagctggagctgcagcagtctcccaggagcagtcacgtaccccaaaa
cgggacatgggcaaggaggaggctgtgacgtcctgccctccagactgcccccacagtgca
ccactaccatctgatgtcctggtagagattaaggaggtgttgagtattgcagtaggcccg
cggtctgaaaaggaggcgttgacttgtctacagctgaacgctctactgggaaaagtagga
gacacactgagctgcaaaaagttctcattcccaatgcctgaacagatgctgatacgttgc
accgtcctactagcctgtaaactagtttcaggggagctgcccatggtgtccccacaggag
gaatgtggtaggacagtgtctcctggtaggacagtgtctcctgatccagtactaccagag
tcaccagtccaaagggtaggctgttcaatcaaagtcctgctggagcagttgatcctcctg
tgggggagagactgttgttcatcagcccccctccacctgctcttcacagaaatgacactc
agtgctgtcctcatggccagtgactcacagtgggacaacttcctgttcctggtcagacag
ctggtagagcgggggattctgggagaggaagaagtggtctctcattggaggaagctgtca
cagttaccctggccaacggaattcatagagaagatccagcagcagtcctcttccaccaca
tcccttcctctgcctgagcttcagaaccacatggacatgttgcaggtctcaccacaacct
gtagagggagccaactaa
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