Oncorhynchus nerka (sockeye salmon): 115145958
Help
Entry
115145958 CDS
T07952
Symbol
ccdc174
Name
(RefSeq) coiled-coil domain-containing protein 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115145958 (ccdc174)
03041 Spliceosome [BR:
one03041
]
115145958 (ccdc174)
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
115145958 (ccdc174)
Spliceosome [BR:
one03041
]
Complex C
Other components
EJC/TREX
115145958 (ccdc174)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
115145958
NCBI-ProteinID:
XP_029543532
LinkDB
All DBs
Position
LG2:40841040..40844794
Genome browser
AA seq
591 aa
AA seq
DB search
MDKKKKQYAVTASSLVDLKAELYRKQEQFKHEKLGQDAGTSTKAPKSKKPNVWSKQNEGV
SERSQKDVELVAEEENNLDRAKRKLEEKAKLYEQMTKGDFLDEETEGLFLVDFTQKIIDK
KRENHAQRESEREDRESSSPIPPPENPGEEWVDYVDALGRSRRCMKKDLPGFKKMDKDFQ
GKRLDPAEKDLLSEDMRRELQRQEWEREEEEAMNRPVGPIHYENIREQEARELGVGYFAF
SQDQEQRRKQRETLDMLRDQTTDQRCKRDQLKEKRKTLLDARLAKVRQRKMKKAKLDGTE
DDQGDEHNQEGKEDLIGPIPPSGGAPEEAPALKKVVVEIQERRDTKPGVPHVREWDRGKV
DFFGEWTSRRRDERESEFAPPSAYFSNNKRQSYGKEAKREKDKPKMAFKWSEGQGGGCKV
PQDNPKSTPVSQPQPRSTPIPQPSTPEPSQPQPTQSPAQPQNTVHLQNTPAPPEPQCPPQ
PPPQYPPSQQPQPQYTPPPPPPQTHPRFDYPFQPQFAHLPFHPQYPTPPHLQYGAPPHYH
PQYTPQYPPQPPTQPQAPTQPQAPTQTQPPPQTQPPSQSLDDMLSFYKNYS
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaagaaaaagcaatatgccgtgactgcttcatctctggttgatctcaaagct
gaactctataggaaacaagagcaattcaaacatgaaaaattgggtcaagatgctggaact
agtaccaaagcccccaaaagcaagaaacctaatgtatggagcaaacagaatgagggtgtt
tcagagcggtcacagaaagatgtggaactggtggcagaagaagagaacaaccttgacagg
gcaaagcgcaagctagaggagaaggcaaaactgtatgagcagatgaccaaaggagacttt
ctggatgaggagacagagggactttttctggtggatttcacccagaagattattgacaag
aagagagagaatcatgcccaacgagagagtgagagagaggatagagagagctcctccccc
atcccaccccctgagaacccaggcgaggaatgggtggattatgttgatgctttgggacga
tctcggagatgcatgaagaaagacctaccagggttcaagaaaatggacaaagactttcag
ggaaaaagacttgacccggctgagaaggacctgctgtcagaggacatgcgtagagagctg
caaaggcaggagtgggagagggaggaggaggaggccatgaacagacctgtgggtccaatc
cactatgagaacatcagggagcaagaggcccgtgagctgggtgtgggctactttgcattc
tctcaggaccaggagcaacgcaggaaacagagagagaccctggacatgctcagagaccag
acaacagaccagcgctgtaagagggaccagctgaaggagaagagaaagactctgctggat
gctcggctggccaaggtgaggcagaggaagatgaagaaggccaagctggacggaactgag
gacgaccagggagatgaacacaaccaagaagggaaggaggacctgattgggcccataccc
ccatcaggtggagcacctgaagaggcccctgcattgaagaaggtggtggtggagatccag
gagaggagggacaccaagccaggagtaccccatgtcagagagtgggacaggggcaaagtg
gacttttttggcgagtggacgagtcggcggcgggatgagagggagtcggaattcgcccct
ccctctgcgtacttcagcaataataaaagacagagctatgggaaagaggccaaacgtgag
aaggacaaacccaaaatggccttcaagtggtcagaggggcagggtggagggtgcaaggtg
ccccaggacaaccccaaaagtactcctgtatcccagcctcagcccagaagtactcctata
ccccagccaagtacccctgaaccctcacaacctcaacccacacaatcccctgctcagccc
caaaacactgtccatctccaaaatacacctgcacctccagaacctcagtgcccccctcaa
cccccacctcagtaccccccctcccaacagccccaaccccaatatacaccaccacctcca
ccaccacaaacacaccctcggtttgattacccatttcagccccaatttgcacatctaccc
tttcatccccagtatcccactccacctcacctccagtatggagccccacctcactaccac
cctcaatacaccccacagtatcccccccagccccccactcagccccaggcccccactcag
ccccaggcccccactcagacccagcccccccctcagacccagcccccctcccagagcctg
gatgacatgctgtccttctacaagaattattcttga
DBGET
integrated database retrieval system
