Oncorhynchus nerka (sockeye salmon): 115145960
Help
Entry
115145960 CDS
T07952
Symbol
rin3
Name
(RefSeq) ras and Rab interactor 3
KO
K23687
Ras and Rab interactor 2/3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115145960 (rin3)
Membrane trafficking [BR:
one04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
115145960 (rin3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
RA
SH2
RA_3
RA_2
EcsC
Motif
Other DBs
NCBI-GeneID:
115145960
NCBI-ProteinID:
XP_029543535
LinkDB
All DBs
Position
LG18:17186141..17197793
Genome browser
AA seq
1262 aa
AA seq
DB search
MTPPTPPSKPSSPPVSPPPPVSPADPTPSPPFHLDSSTPLPPKPLTPSSPSSSTPPLLSA
SEPLPPQIDLTIGSTDTTDVPHATVPEDCTPPLPKPLAEASTSLLPTPISPQVSVPSTIP
FPNILDVSPPPLPLDMSSSVPELSSSEPTVPALSSHPVPNPSSLPLSSACVPPIAKPPPP
TPPIHPLSKPSLSPFSSPPVPPVSKFSSPPLPGPSATGKLSGPSQPRPPVPHPHSIAKPS
SPALPRPPLPSTKPSSPPLPTPLVPLSAKPSSAPTPATATAPPPSISILEKLIKTCPVWL
QLAMAQEKSSLILKKETPGIFLVRKSPDQKAMVLSVRVSNQQGELQVQDILVKEEKSLIY
LEGSVLVFDTIFKLISFYCVSRDILPFTLRLPEVIVQATKYEDIETISELGSDFWGSQLN
SSSEDPGQRDTPVDQRRGHSSSCEIHLSAGTGNERLWYVNPVFIEEYCSSLEASSPVVAP
ILRSQSLNTPGQGQGQVPPKFKRPPPRPPNAPEGLLLSQGAKHGNRGTSDSPSPRSPPTP
LRVTTKLGQKGEGNSSKGSGEGERAASQLFSEREVSVTATDSVAATQPLQHLSPHGATAR
HQHPGPRPPPHRIPLVPLRRMPSEKRPPPPGQEPPQPEGGPLTLTTPSKRKMKEEGSVDT
VPVASLVCIDGTTNMVEEKKELRVEPYAGETLQRQGTSETSNSSDAVSVAAPAPLTKRAA
PPVPPPRKNKPSQATPTTTLSPDVIGGGLLSINASSDTPQTSSIPSPARRAISIAEGEVR
EARGADVSLYAPDGGAALPALDHDSYSTSSTEEEADTVASQAGGAVGTNNTKVPMKRTPT
IMLDRAKQRLSMVNFSSVFTNFMSADHKLQKRMVELSRDGSSYFGNLVKDYRVYILETMG
KHSSSTELLQEIRQMITQLKSYLIQSTELQNLLEPNVYTEDKLEVIMEAALCKAVLKPLR
EAVYSGLKDIHSRGGSLKRLKENQSVVLGTTTTDLGVTTSVPEIPVMEKIQLKLMTLHLE
YSPQKKIDLLLKTCKIIYESMSIGCPGKAFGVDDFLPVLMYVLARSNTAFLLLDVEYMME
LMDPALQLGEGSYYLTTTYGALEHIKNYDKQAVTQQLSLEIQDSIHRWEKRRTLNKAQVS
RSSVQDFINVSFLEAGSNTKTLGVLPTTTAQDLCAQCADKFEVLEPEFYSLSVLVEGHYQ
LLAPGESPLTIKSSFHHCEPRKEYHFVYRPGRTESEGQEAESEEPAPTAETEPDEEKRLI
EI
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgactcccccgactcccccctctaaaccctcctctccccctgtctcacccccaccccct
gtctcacccgctgaccccactccctcaccaccattccatttagactcctccacccccctc
ccccctaaacccctcactccctcctcaccctcctcatccacaccaccccttctttcagca
tctgaaccgctccctcctcaaattgacttgaccattggctccactgacaccactgatgtc
cctcatgccactgtcccagaggactgtacccccccactccccaaacccctagcagaggca
tccacttcactcctccccacaccaatatcccctcaagtctcagtaccctctacaatccct
tttcctaatatcttggatgtctctcctcctcctctccccttagatatgtcctcttcagtc
ccagagctctcttcttcagagccaaccgtaccagcactttcctctcacccagtcccaaat
ccctcctcacttcctctctcctctgcctgtgtacctcctatagcaaaaccccctcccccc
actccccccattcatcctctctcaaaaccctccttatctcctttctcctctccccctgtt
cctcctgtctcaaagttctcctccccccctcttcctggaccctcagcaactggaaaactc
tccggtccatcccagccgagaccccctgttcctcaccctcactcgatagcgaagccatcc
tcccctgctctccccagaccccctcttccatctaccaagccctcgtctccccctctcccc
accccactagtccctctttcagctaagccctcctcagccccaaccccagccacagccaca
gccccaccacctagcatcagtatcctggagaagctgatcaaaacatgtcctgtgtggttg
cagttagccatggcccaggagaaatcctcacttatactgaagaaagaaactcctgggatc
tttttagtgcgcaaaagcccggaccagaaggccatggttctgtcagtacgtgtgtctaac
cagcagggggagcttcaggtccaggacattctggttaaagaggagaagtcattgatctac
ctggaagggtctgtcctggtctttgacaccatcttcaaactcatctccttctactgtgtc
agccgggatattctccccttcactctgaggttgcctgaggtcatcgtccaggcaaccaag
tatgaagatatagagacgatatcggagttaggctcagatttctggggctctcagctgaac
agttcctctgaggatccaggacaaagggacacaccagtagaccagcgccggggtcacagc
tcctcctgtgagatccatctgtctgctgggaccggtaacgagcggctgtggtacgttaac
cccgtcttcattgaggagtattgcagcagcctggaggcctcctctcccgtcgttgctccc
atcctcaggagccagagcctgaacaccccaggccaagggcagggccaagtaccccccaaa
ttcaaacgccccccaccccgaccccctaatgcccctgagggattgttactgtcacagggg
gccaagcatgggaacagagggacgtctgattccccctccccacgctcaccacccacacct
cttagagttacaaccaagttagggcaaaaaggagaaggaaacagcagcaaaggcagtggg
gagggagagagagctgcttctcagcttttctcagagagagaggtgtcagttacagccact
gactcagtagcagctactcagcctctacagcatctgtcaccacacggagcaacagctaga
catcagcacccaggaccccggcctcccccacacaggataccacttgtgcccctacggcgg
atgccctcagagaagcgtcccccacccccaggacaggagccgccccagccagaaggaggc
cccctgaccctcaccacaccctcaaagaggaagatgaaggaggagggcagtgttgacaca
gtgcctgttgcttcactggtgtgcatcgacggcaccaccaacatggtagaggagaagaag
gagttaagagtggagccctatgctggtgagacactgcagaggcaagggacatcagagacc
tcaaacagcagtgacgctgttagcgtggctgcaccagcccctctgacgaagagggccgca
ccgccagtcccgcctcccagaaagaataagccctcccaggccacgcccactacaactctc
tccccagacgtgataggtggaggacttctttcaatcaatgcgtcatcagacacaccccag
acctccagcatcccctcgccagcccggagggccatttccatcgctgagggggaggtgagg
gaggccaggggggcagatgtgtccctgtacgcccctgatggtggcgcggccctccctgca
ctggaccatgactcttactctaccagcagcacagaggaggaggccgacacggtggccagt
caggctggaggggccgttgggaccaacaataccaaagtgccaatgaaaaggaccccgacc
atcatgctggaccgtgccaagcaacgcctctccatggtcaacttctccagtgtgttcacc
aacttcatgagcgctgaccacaagctgcagaagaggatggtggaactgtcccgggacggg
agttcctacttcgggaacctggtgaaggattacagggtgtacattctggagaccatgggg
aagcacagctccagcactgagctgctgcaggagatcaggcagatgataacccagctgaag
agttacctcatccagagcactgagctgcagaacctcctggagcccaacgtctacacagag
gacaaactagaggtgattatggaggctgctctgtgtaaggctgtgctgaagcctctgcgg
gaggctgtctactccggcctgaaggacatccactccagggggggctctctgaagaggctg
aaggagaaccagagtgtggtcctgggcaccaccaccacagatctgggggtcaccaccagc
gttccagagatccctgtcatggagaagatccagctgaagctgatgaccctccaccttgag
tactcccctcagaagaagattgatctgctcctcaagacctgcaagatcatctatgagtcc
atgtctataggctgcccaggaaaagcatttggtgtagatgacttcctgccagtgctgatg
tacgtcctggccaggagcaacacggccttcctgctactggacgtagagtacatgatggag
ctgatggaccctgcactgcagctaggagaaggctcctactacctgacgaccacgtatgga
gccttggagcacataaagaactatgacaagcaggcggtgacacagcagctcagtctggag
atccaggactctatccaccgctgggagaagagacgcaccctgaacaaggctcaggtgtca
cgctcatctgtacaggacttcatcaatgtgtcgttcctggaggcggggtctaacactaag
accctgggggttctccccaccaccacggcccaggacctgtgtgcccagtgtgctgacaag
ttcgaggtgctggagccagagttctacagcctgagtgtactagttgagggccactaccag
ctcctggccccgggggagtcccccctcaccatcaagtctagtttccaccactgtgagccc
cgcaaggagtaccattttgtctaccggcctggaaggacagagtcggaagggcaggaggca
gagagtgaggagccagcacccacagcggagacagagcctgacgaggagaagaggctgatc
gagatatga
DBGET
integrated database retrieval system
