Oncorhynchus nerka (sockeye salmon): 115146004
Help
Entry
115146004 CDS
T07952
Symbol
srp54
Name
(RefSeq) signal recognition particle 54 kDa protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03060
Protein export
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
115146004 (srp54)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
one02044
]
115146004 (srp54)
Enzymes [BR:
one01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
115146004 (srp54)
Secretion system [BR:
one02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
115146004 (srp54)
Eukaryotic Sec-SRP protein
115146004 (srp54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
cobW
nSTAND3
CbiA
NPHP3_N
AAA_17
DUF2209
ResIII
MeaB
AAA_33
SRPRB
AAA_22
AAA
MobB
AAA_30
AAA_19
APS_kinase
nSTAND_NTPase7
ATP_bind_1
AAA_16
Thymidylate_kin
Zeta_toxin
AAA_31
Torsin
AAA_18
ArsA_ATPase
Motif
Other DBs
NCBI-GeneID:
115146004
NCBI-ProteinID:
XP_029543598
LinkDB
All DBs
Position
LG18:complement(20834560..20845684)
Genome browser
AA seq
504 aa
AA seq
DB search
MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKSAI
DLEEMASGLNKRRMIQHSVFKELVKLVDPGVKAWTPTKGKNNVLMFVGLQGSGKTTTCSK
LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIAAEGVEKFK
NESFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACEAQAKAFKDKV
EVSSVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDLEPFKTQPFISKLLGMGDI
EGLIDKVNELKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQIMGMIPGFGTDFM
SKGNEQESMARLKKLMTIMDSMNDQELDNKDGAKLFTKQPNRIARVARGSGVATRDVQEL
LTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQMAKLNQQMAKMMDPRVLHHMGGMAGL
QSMMRQFQQGAAGNMKGMMGFNNM
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggtgttagccgacttgggaagaaaaataacctcggcattgcgatcactgagcaacgcc
accatcatcaatgaggaggtattaaatgcaatgctgaaagaggtatgtgctgccctccta
gaagctgatgtcaacatcaaattggtgaagcagctcagagaaaatgtcaagtcagccatt
gacctggaggagatggcctctgggctgaacaagaggcgaatgatccagcattctgtgttc
aaggagctggtcaagctggtggatccaggtgtcaaggcttggacacccacaaagggaaag
aacaatgtcctcatgtttgtgggtcttcagggcagtgggaaaaccacaacatgttccaag
ctggcgtactactaccaaagaaaagggtggaaaacctgtttgatatgcgctgacactttt
agagctggtgcttttgatcagttgaagcaaaatgcaacaaaagccaggattccattctat
ggaagttacacagagatggaccctgtcgtcatagctgcggaaggtgtggaaaagtttaag
aatgagagctttgaaataattattgttgataccagtggtcgacacaagcaagaagattcc
ctttttgaggagatgttacaggtttccaatgcagtgcaacccgacaacattgtgtacgtg
atggatgcctccattggtcaagcttgtgaagcacaggctaaagccttcaaagacaaagta
gaagtttcctcagttatagtgacaaagctagatggccacgccaaaggaggtggtgctctc
agtgcagtggctgctactaagagtcccatcattttcattggtactggtgaacacattgat
gacttggagccatttaagacccaacccttcatcagcaagctactgggcatgggagacatt
gaaggtttgatcgacaaagtcaacgaactcaagctggatgacaacgaggagttgattgac
aagttgaaacatggtcagttcactcttagagacatgtacgagcagtttcagaacatcatg
aagatgggaccgtttggccagatcatgggtatgatcccaggtttcggaacggacttcatg
agcaaaggtaacgagcaggagtccatggccaggttgaagaaactcatgacaattatggac
agcatgaatgaccaagaacttgacaacaaagacggtgcaaagcttttcaccaagcagccg
aaccgaattgcccgagttgcgcggggttctggggttgccaccagggacgtccaggagctg
ctcacccagtacacaaagttcgcccagatggtgaagaagatgggtggcatcaagggcttg
ttcaaaggtggtgacatgtcaaagaatgtcaacccctctcagatggctaagttaaaccaa
cagatggcaaagatgatggacccaagggttctccaccatatgggtgggatggctggtctc
cagtccatgatgagacagttccaacagggtgcagctggcaacatgaaagggatgatggga
ttcaacaacatgtga
DBGET
integrated database retrieval system
