Oncorhynchus nerka (sockeye salmon): 115146007
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Entry
115146007 CDS
T07952
Name
(RefSeq) sorting nexin-6-like
KO
K17920
sorting nexin-5/6/32
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115146007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115146007
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115146007
Membrane trafficking [BR:
one04131
]
Endocytosis
Macropinocytosis
Sorting nexins
115146007
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
115146007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
AceES-2
FAN1_HTH
Motif
Other DBs
NCBI-GeneID:
115146007
NCBI-ProteinID:
XP_029543604
LinkDB
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Position
LG18:20918932..20938774
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AA seq
407 aa
AA seq
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MMQEGLDDGPDFLSEEDRGPRAVNVDLQTDATLQVDISDALSERDKVKFTVHTKSTLPNF
KQNEFSVVRQHEEFIWLHDSFVENEEYAGYIIPPAPPRPDFDASREKLQKLGEGEGSMTK
EEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPVLRKDMNFHVFLEYNQDLSVRGKN
KREKMEDFFKNVVKSADGVLVAGVKDVDDFFEHEKTFLLEYHNRVKDASSKSDRMIRSHK
NAADDINRIASTLYTLGTQDSTDVCKFFLKVSELFEKTRKIEARVAADEDLKLADLLKYY
LRESQAAKDLLYRRGRALVDYENANKALDKARAKNKDVLQAETSQQVCCQKFEKISESAK
QELLDFKTRRVAAFRKNLVELAELELKHAKGNLQLLQSCVGVLKGDT
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaagaagggctggacgatggtcccgatttcctctccgaggaggacagaggacct
agggcagtcaatgttgacctccaaactgatgcaacacttcaagtggacatttctgatgcg
ttgagtgagcgggacaaggttaagtttactgtccatactaagagcactcttcctaacttc
aagcagaatgagttttcagtggtgaggcagcatgaggagttcatctggctccatgactct
ttcgtggagaatgaggagtatgcaggctacattattccccctgccccaccaagacctgac
ttcgatgcctctagagagaagttacagaaactgggggaaggtgaaggttccatgaccaag
gaagagttcaccaaaatgaaacaggaacttgaagccgaatacttggctatcttcaagaag
accgtggcgatgcatgaagtgtttctttgccgtgtggctgcccatcctgtcttaaggaaa
gacatgaacttccatgtctttttagagtacaaccaagacctgagtgtccgaggcaaaaac
aagagggagaagatggaagatttcttcaagaatgtggtgaagtcagcagacggtgtgtta
gtggcaggggtgaaggatgtagatgatttctttgagcatgagaagacattccttttagag
taccataatcgtgtcaaagatgcctcctccaaatctgatagaatgatcaggtctcacaaa
aatgctgcagatgatatcaatagaatcgcatccacactgtacactttaggaacccaggac
tccacagatgtgtgcaaatttttcttgaaagtctctgagctgtttgagaaaacacggaaa
atagaggctcgagtggctgcagatgaggacctgaaacttgccgacttactgaagtattat
ctcagggagtcacaagctgctaaggatctattgtataggcgagggagggccctggtagat
tacgagaatgcaaacaaagctctggacaaagccagggcaaagaacaaagatgtgcttcag
gcagagaccagccagcaggtgtgctgtcagaagtttgagaaaatctcagagtccgcaaag
caagagcttctagacttcaagacgagacgagtagcagccttcagaaagaacttggtggaa
cttgccgaactggaactcaaacatgctaagggtaatttacaattattgcaaagctgtgtc
ggggtcctcaaaggagacacttag
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integrated database retrieval system