Oncorhynchus nerka (sockeye salmon): 115146022
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Entry
115146022 CDS
T07952
Symbol
scfd1
Name
(RefSeq) sec1 family domain-containing protein 1
KO
K19998
sec1 family domain-containing protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115146022 (scfd1)
Membrane trafficking [BR:
one04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
115146022 (scfd1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
115146022 (scfd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
115146022
NCBI-ProteinID:
XP_029543633
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All DBs
Position
LG18:complement(21678736..21696102)
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AA seq
634 aa
AA seq
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MAASVREKQAAALKRMLNFNTSPLKNTAAEPVWKVLIYDRFGQDIISPLLAVKELRDMGI
TLHLLLHSDRDPIPDVPAIYFVMPTEENIDRICQDLRNQLYESYYLNFISAISRSKLEDI
ASAALSANAVTQVTKVFDQYLNFITLEDDMFILCNQNKELISYHAINKPDIMDTEMEAIM
DTIVDSLFCFFVTLGAVPIIRCPRGNAAEMVAVKLDKKLRENLRDARNSLFTGDNMGAGQ
FSFQRPLFVLADRNLDLATPLHHTWTYQALIHDVLDFHLNRVSMDESVGSEASPSGARPK
KKNKKSYDLTAADKFWQKHKGSPFPEVAESVQEELDTYRAQEDEVKRLKSIMGLEGEDEG
PISSISMSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLDHIKSRKLDVYFEYEEKL
MSKSTLEKSLLDIISDPDAGTPEDKMRLFLIFYITALQPPSETDLDQYKKALLETGCDLS
SLNYIKQWKAFTKIAATPSNYGNSGVKPMGLFSRVMNSGSQFVMEGVKHLVLKQHNLPVT
RILDNLMEMKSNPETDDYRYFDPKMLRGSESSTPRNKNPFQEAIVFVVGGGNYIEYQNLV
DYTKAKPGKRVLYGCSELFNAGQFIKQLSSLGQK
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctccgtccgggaaaagcaggcagctgcattgaagcgcatgctgaatttcaac
acttctccgttgaaaaacactgctgctgagccagtatggaaggttctgatctacgacagg
tttggccaggacataatctcccctctactggcggtcaaagaactacgggacatgggaatc
actttgcacttgttgcttcattcagacagagatcccatcccggatgtgccagccatctat
tttgttatgccgacagaggagaatattgaccggatatgccaagaccttcgtaaccagctg
tatgagtcatactatttgaacttcatctcagccatatccagaagtaaactagaggatatt
gctagtgcagctctctcagccaacgctgtcacccaggttaccaaggtgtttgatcagtat
ttgaatttcatcacactcgaagatgatatgtttatcctctgtaatcaaaataaagagctc
atctcctaccatgcgattaacaaaccggacatcatggacacagagatggaggccatcatg
gatacgattgtagacagccttttctgcttctttgtcactctgggtgctgtccccataatc
cgctgtccaagagggaatgctgcggagatggttgcggtgaaacttgacaagaagctgagg
gagaacctgcgagacgccagaaacagcctgttcactggagacaatatgggggccggccag
ttcagcttccagagacccctatttgtactcgctgaccgcaacctggatcttgccacccct
ctccaccacacatggacctaccaggccctcatccacgatgtgctggacttccacctgaac
agggtcagtatggacgaatctgtggggtcagaagcttccccttccggagccagacccaag
aagaaaaataagaagagttatgacctcacagccgcagacaaattctggcagaaacacaag
ggcagcccgttcccggaggtggctgagtctgtacaggaggagttagacacgtatcgagcc
caagaggacgaggtgaaacgcctcaagagcatcatggggttggagggtgaggatgaggga
cccattagtagtattagtatgtcagacaacaccgcaaaacttacctcagctgtcagctcc
ctaccagagcttctggagaagaagaggctgattgacctccacactaacgtagccaccgcc
gttctggatcacattaagagccgtaaactggacgtgtactttgagtacgaggagaagctg
atgagcaaatccaccctggagaagtctttgctggacataatcagtgaccctgacgcggga
acaccagaggacaagatgagactgtttctgattttctacatcacagccctgcaaccccct
tcagagactgatctggaccaatacaagaaggctcttctagagactggctgcgacctgtcc
tctctcaactacatcaagcagtggaaggctttcacaaagattgctgccacaccatctaac
tatggaaacagcggtgtgaaacctatgggcctcttctctagagtgatgaactctggctcc
cagtttgtcatggagggggtgaaacacctggtgcttaaacagcataacctgccagtcacg
cgtatcctggacaacctgatggagatgaagtccaatccggagactgatgactacagatac
tttgatcccaagatgctgcgcggcagtgagagctcaaccccaaggaacaagaacccgttt
caagaggctatcgtctttgtggtcggaggaggaaactacatagaatatcaaaacctggtg
gactacacaaaggcaaagccagggaagagggtgctgtacggatgcagtgagctcttcaat
gcagggcagttcatcaaacagctatcctcactcggccaaaagtaa
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