Oncorhynchus nerka (sockeye salmon): 115146113
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Entry
115146113 CDS
T07952
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1-like
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04080
Neuroactive ligand-receptor interaction
one04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115146113
04082 Neuroactive ligand signaling
115146113
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115146113
Ion channels [BR:
one04040
]
Ligand-gated channels
GABA-A
115146113
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
115146113
NCBI-ProteinID:
XP_029543783
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Position
LG18:complement(26880093..26935012)
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AA seq
503 aa
AA seq
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MHPGDPFPVPASTAQLVMWTALDRGRWEIFCLFLMVAMVCGAQSANEPSNMSFVKATVDK
LLKGYDIRLRPDFGGAPVDVGMSIDIASIDMVSEVNMDYTITMYFQQSWRDKRLSYTGIP
LNLTLDNRVADSLWVPDTYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMM
DLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGDNSVTGVENIELPQFSIIDYHIQSTKAV
FATGSYPRLSLSFKLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVL
TMTTINTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGRGPHLQKKVAE
KAAKTNNENKSRLESNKVQVDAHGNILLTNLEIRNEMGGMGGMAGMTGAEMIGALNDPRA
TMFSYDSASIQYRKPMASRDLYGRPALDRPVGHKKSRLRRRASQLKVKIPDLTDVNAIDK
WSRVIFPIAFTFFNLVYWMYYVH
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgcatcccggcgaccccttccctgtgccagcatcgacagctcagttagtgatgtggacg
gctttggaccgcggacgctgggagattttttgtcttttcctaatggtcgccatggtctgc
ggcgctcaaagcgccaacgagcctagcaacatgtcatttgtgaaagcgaccgtggacaaa
ctgcttaaggggtatgacattcgtctgaggcctgattttggaggtgcccctgtggacgtt
ggaatgagcatagatatcgcaagtatcgacatggtttctgaagtcaacatggattacacc
atcaccatgtacttccagcagtcctggagggacaagcgcttgtcctacacagggattccc
ctcaacctgacgctggacaacagggtggctgactcgctctgggtccctgacacctacttc
atcaacgataagaagtcctttgtgcacggggtcacagtgaagaacagaatgatccgactg
catccagacggaactgtgctctacggcctcaggatcaccactacggcagcttgcatgatg
gatttgcgtagataccctctggacgagcagaactgcaccctggagatcgagagctatggg
tacaccactgatgacatcgagttctactggaaaggtgataattcagtgactggggtggag
aacatcgaacttccccaattctctattatagactaccacatccaatccacaaaagcagtg
tttgctacaggctcctacccgaggctctctctgagttttaagctgaagaggaacattggc
tacttcatcctacagacctacatgccctccaccctgatcaccatcctatcctgggtctcc
ttctggatcaactatgacgcgtctgcggccagagtcgctttaggtataaccactgtgctg
accatgaccaccatcaacacccacttgagagagactttacctaaaatcccctatgtcaag
gctatagacatctacctgatgggctgcttcgtgtttgtcttcctggccctgctggagtac
gcgtttgttaactacatcttcttcggtcgggggcctcacttacagaaaaaggtggcggag
aaagcagctaaaaccaataatgaaaacaagagccgtctggagagtaacaaagtgcaggtg
gacgcccatggcaacatcctcctgaccaatctggagatccgtaacgagatgggtgggatg
ggtggcatggccgggatgaccggggccgagatgataggggctctcaacgacccgcgggcc
accatgttctcctacgacagcgccagcatacagtaccgcaagcccatggccagccgagac
ctgtatggtcgaccggccctcgaccggcctgtcggccacaagaagagtcgtttgaggagg
agggcgtcgcagctcaaagtcaagatcccagacctgacggatgtcaacgccatagacaag
tggtcccgcgtcatcttccccatcgcctttaccttcttcaacctggtctactggatgtac
tacgtccactaa
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