Oncorhynchus nerka (sockeye salmon): 115146114
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Entry
115146114 CDS
T07952
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04080
Neuroactive ligand-receptor interaction
one04082
Neuroactive ligand signaling
one04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115146114
04082 Neuroactive ligand signaling
115146114
04519 Cadherin signaling
115146114
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115146114
Ion channels [BR:
one04040
]
Ligand-gated channels
GABA-A
115146114
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
115146114
NCBI-ProteinID:
XP_029543784
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All DBs
Position
LG18:26965304..27004531
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AA seq
456 aa
AA seq
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MSKRLDLSHYLAVFFSMMVLWQSRSRVESSAYASEAFKNNITLFTRILDSLLDGYDNRLR
PGLGDRVTEVKTDIYVTSFGPVSDTDMEYTVDVFFRQSWIDERLKFNGPMNILRLNNLMA
SKIWTPDTFFHNGKKSVAHNMTMPNKLLRIMEDGTLLYTMRLTVQAECPMHLEDFPMDSH
SCPLKFGSYAYTMAEVTYIWTRNASASVEVAGDGSRLNQYHLQGQTVGTETIKSSTGEYT
VMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSI
SARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSVVNVKKKEAS
VTKKNNAYAVAVANYAPNIIKDQGGMPTISKSATSDPNKAKPEVKPEQNKKTFNSVSKID
RMSRIMFPVLFSGFNLVYWATYLNREPVIKDMVPSK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcggttggatttatcacattatctagcggtgttcttctcgatgatggtactg
tggcagtcaagatcaagagtggaatcatcggcatatgcttcagaagccttcaaaaacaat
atcactctgttcacccggatcttggacagccttctggatggctatgacaaccgattacga
cctggacttggcgatcgggtgacagaggtgaagactgatatttatgtcacaagttttggt
ccagtgtcagacacagacatggaatacaccgtggacgtgttcttccgtcagagctggatt
gacgagcggctgaagttcaacgggccgatgaatatcctgcggctgaacaacctgatggcc
agtaagatctggacgccagataccttcttccacaatgggaagaaatctgtcgctcacaac
atgaccatgcccaacaaactgctccggatcatggaggatggaacactgttgtacactatg
aggttaacggtccaggcggaatgtcccatgcacctcgaagacttccctatggattcccac
tcctgtccactgaagtttggcagctatgcttacacaatggctgaagtgacgtacatttgg
actcgaaatgcatcagcgtcagtggaggtagcaggagatggatccagactgaaccagtat
caccttcagggccaaactgtcgggacagagaccattaaatcaagcacaggtgagtacacc
gtcatgacagcccacttccacctgaagaggaagattggctactttgtgatccagacttac
ctgccctgcatcatgaccgtcatcctctcccaggtctccttctggctcaaccgagagtct
gtacccgccagaactgtctttggtgtgaccactgtgctcactatgacgacgctcagtatc
agtgcccgtaactctctgccgaaggtggcctacgccacggccatggattggttcatcgca
gtgtgctacgcctttgtgttctctgccctcatcgagtttgctacagtcaactacttcact
aaaagaggctgggcctgggacggcaaaagtgtggtcaacgtcaagaagaaggaggcatcc
gtcacgaagaagaacaatgcctacgctgttgccgtggcaaactacgctccgaacatcatc
aaggaccaaggtggtatgcccaccatctccaagagtgccacctctgaccccaacaaggcc
aagccagaggtcaagcccgagcagaacaagaagaccttcaacagcgtcagcaaaatcgac
cgtatgtcccggatcatgttccctgtgctcttcagtggttttaacctggtctactgggcc
acctacctgaacagagaaccagtcataaaggacatggtcccgtccaaatga
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