Oncorhynchus nerka (sockeye salmon): 115146115
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Entry
115146115 CDS
T07952
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-1-like
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04080
Neuroactive ligand-receptor interaction
one04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115146115
04082 Neuroactive ligand signaling
115146115
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115146115
Ion channels [BR:
one04040
]
Ligand-gated channels
GABA-A
115146115
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
115146115
NCBI-ProteinID:
XP_029543785
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Position
LG18:27012755..27026839
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AA seq
468 aa
AA seq
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MNCGISAMCTKLLLQHVKGKAMNAWLLLALLGVCVASFGPSTKEDEDYEDVPINKTWVLS
PKVYESDVTLILNRLLQGYDNKLRPDIGVRPTVIETAVYVNSIGPVDPINMEYTIDIFFA
QTWYDSRLKFNSSMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRLWNNGRV
MYTLRLTINAECYLKLHNFPMDEHSCPLEFSSYGYPKNEILYRWQKRSVEVADQRYWRLY
QFAFVGLRNTSDVAHTQSGEYVILTIFFDLSRRMGYFTIQTYIPCSMIVVLSWVSFWINK
DAVPARTSLGITTVLTMTTLSTISRKSLPKVSYVTAMDLFVSVCFIFTFAALMEYGTLHY
FTSNRQSKKDTDKKPQKSSSLVNIRPGTSLLQMNNIAPYQDEDDYAYECLDGKDCTSFFC
CFDDCRSGAWRENRMHVRVSKIDSYSRIFFPTAFGLFNLVYWIGYLYL
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaactgtgggatttccgcaatgtgtaccaagcttctgctgcaacatgtcaaaggcaaa
gcgatgaatgcgtggctgttgctagctcttctcggagtctgtgtggcgtcatttgggccc
agtacaaaggaggatgaggactatgaagacgtccccataaataagacctgggttttatcg
cccaaggtctatgagagcgatgtcaccttgatcttaaatagattgctgcagggctatgac
aacaaactccgacctgacattggagttaggcccacagtgattgagacagcggtgtatgtc
aacagcatcggaccagtcgatcctatcaacatggagtacaccatagacatcttctttgcc
cagacgtggtatgacagtcgccttaagttcaacagctccatgaaagtcctgatgctcaac
agtaacatggtgggaaagatctggattcctgacaccttcttccggaattctagaaagtct
gacgcccactggatcaccactccgaaccgtctgctgcgactgtggaacaacgggagagtg
atgtacacgctgaggttgactattaatgcggaatgctaccttaagctgcataactttcct
atggacgagcactcgtgtccgctggagttttcgagctatggctatcctaaaaatgagatt
ctgtaccgttggcaaaagcgttctgtggaagtggccgaccaaaggtactggagactctac
cagtttgcgttcgtcggtttacgaaacacatcagatgtggcgcatacacagtcaggtgaa
tatgtcatcttgacaatattttttgacctgagtcggcgaatgggctacttcactattcag
acgtacatcccctgcagcatgattgtggtcctgtcatgggtctctttctggatcaataaa
gatgctgtccctgccagaacctccttaggaatcaccacggtgcttaccatgacaacgctg
agcaccatctccaggaagtcacttcccaaggtatcctatgtgacagccatggacctgttt
gtgtctgtctgcttcatcttcacgtttgctgctctgatggaatatgggactctacactac
ttcaccagcaacaggcagagcaagaaggatacggacaaaaaaccacagaaatccagcagc
ttggtgaacattaggccagggacgtcactgctccagatgaataacatcgccccctaccaa
gacgaggatgattacgcctacgagtgtctggatgggaaggactgcaccagcttcttctgc
tgcttcgacgactgtcgctccggagcatggcgcgaaaaccggatgcatgtccgagtttca
aagatcgattcctactcacgaatattcttccccaccgcctttggccttttcaacctggtc
tactggatcgggtatctgtacttataa
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