KEGG   Oncorhynchus nerka (sockeye salmon): 115146128
Entry
115146128         CDS       T07952                                 
Symbol
cdc5l
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115146128 (cdc5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:one03041]
    115146128 (cdc5l)
   03400 DNA repair and recombination proteins [BR:one03400]
    115146128 (cdc5l)
Spliceosome [BR:one03041]
 Complex B
  Other components
   Prp19 complex
    115146128 (cdc5l)
 Complex C
   Prp19-CDC5 complex
    115146128 (cdc5l)
DNA repair and recombination proteins [BR:one03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    115146128 (cdc5l)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect DUF4072 Rap1_C
Other DBs
NCBI-GeneID: 115146128
NCBI-ProteinID: XP_029543822
LinkDB
Position
LG18:complement(27414488..27432853)
AA seq 806 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKAAQRDNEEDTADDP
RKLKPGEIDPNPETKPARPDPVDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGINAQKKRKKKRGVDYNAEIPFEKKPSQGFYDTSMELYEGLEPNFK
RLRQQHLDGELRNEKEEKERKRDRQKIKKKKESDLPSAILQTSGVAEFTKKRSKLVLPAP
QISDAELEEVVKLGQASEVARQTAEESGITNSASSALLSEYSLTNSAMATGLRTPKTPAA
QDKILQEAQNLMALTNVDTPLKGGLNTPLHQSDFSGVTPQRQAVQTPNTVLTTPFRTPGP
GSEGSMTPQGGLTPKGPGTVTPGVTPGRTPLRDKLNINTEEQLADPAYAKHLQRESREQL
KLGLMSLPVPKNDFEIVLPENAETQLEEMETETGYIEDASEIELRRQAVRDAEREKELKL
RHTAVQRTLPRPSEVNESILRPMGTDPLSELQHAEEMIKKEMITMLHFDCLHHPPANQQR
SKQRGPSSTSNNAEHIAHLDRHPYQPISNEDLAQASELLSQEMEVVRAGMGHGDLSMEAY
SQVWEECYGQVLYLSAQSRYTRANLASKKDRIDSLEKKLEINRGHMTCEARRAARLERRL
KVLLGGYQSRAVGLLKQHGELWEQVEQAATELHTFTELKKQEDTAIPRRQEALREDVERQ
QEREKELQQRYGDLLLEKDALLSAKF
NT seq 2421 nt   +upstreamnt  +downstreamnt
atgccgcgtataatgatcaaggggggtgtatggcgaaacaccgaggatgagatcctgaag
gcagcggtgatgaaatatgggaagaaccagtggtctcgtattgcctccctgctgcaccgc
aagtctgccaagcagtgcaaggcccgctggtatgagtggttggatccaagcattaagaaa
actgagtggtccagagaggaagaggagaaactactccatctggccaagctgatgccgacc
cagtggaggaccattgctcctatcataggacgcaccgctgcccagtgtctggagcactac
gagttcctgctagacaaagcggcccagagggacaatgaggaggatacagctgacgatcca
aggaaactgaaacctggtgagatcgaccccaaccctgaaaccaagcccgctaggcctgac
cctgtggacatggatgaagatgagctggagatgctttctgaggccagagctcgtctggcc
aacactcaggggaagaaagctaagaggaaagccagagagaaacagctggaggaggccaga
cgtctggctgctctacagaagcgcagggagttgcgggccgcaggcatcaatgcccagaag
aagaggaagaagaagagaggagtggactacaatgctgagatcccttttgagaagaagcct
tctcagggtttctatgacaccagcatggagctctacgaaggtctggaaccaaacttcaaa
cgcctgcgacaacaacacctggatggagagctacgcaatgaaaaggaagagaaggaaagg
aagagggatagacagaagatcaagaagaagaaggagagtgatcttccatcagccatcctg
cagaccagcggagtagcagagttcaccaagaaacgcagcaaactggtgctgcctgcacca
cagatctctgatgcggagctggaggaggtggtgaagctgggtcaggccagtgaagtggct
cgtcagaccgcagaggagtctgggatcactaactccgcctcctcagccctcctatcagaa
tacagcctcaccaacagtgctatggcaactgggctacgcacccccaagacccctgctgca
caggacaagatactacaggaggcccagaaccttatggctctgactaacgtagacactcct
ctgaaaggaggtctgaacactcctcttcaccagagtgacttctcaggagtcacaccccaa
agacaggcagtacagacacctaatactgtactgaccacacctttcaggacccccggtccg
gggtcagagggcagtatgaccccccagggaggtttaacccctaaaggacccggtactgtt
acccctggagtaaccccgggacgcacccctctacgagacaaactcaacatcaatactgag
gaacaactagcagatcctgcctacgctaaacatctgcaacgagagtcgagggagcagctg
aagctgggtctgatgtcgctgccagtcccgaagaatgactttgagattgttctaccagaa
aacgcagagactcaactggaggaaatggagaccgagaccggatacatagaggatgcctcg
gagatagagctacgcagacaggctgttcgggacgcagagagggagaaagagctgaagctg
agacacactgctgtacagaggactttacccagaccatcagaggtgaatgagtccatcctg
cgtccaatgggaacagatcctctgtcagagctgcagcatgctgaggagatgatcaagaag
gagatgatcaccatgctgcactttgactgtctacaccacccaccagccaatcaacagcgc
agcaaacaacgagggccttcctccacctccaacaacgcagaacacatcgcccacctggac
agacacccctaccagccaatcagcaatgaggatttggcacaggccagtgagttgctgagc
caggagatggaggtggtgagggcaggtatgggtcacggggacctgtccatggaggcctat
agccaggtgtgggaggagtgttacggccaggtgctgtacctctccgcccagagccgctac
accagagccaacctggcctccaagaaggacagaatagactccctggagaagaaactggag
ataaaccgaggccatatgacatgtgaggcccgtcgtgctgctcgtctggagcgccgtctc
aaggtgttactaggagggtaccagtcccgtgctgtaggcctactgaagcagcatggtgaa
ctgtgggagcaggttgagcaggcagctacagagctccacaccttcactgagctgaagaaa
caagaagacacagctataccccgcagacaagaggctctaagggaggatgtggagagacag
caggagagagagaaggagctgcaacagagatatggagacctgctgctggagaaagacgct
ctgctgtctgccaaattctaa

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